co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT2G47650

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0006005: L-fucose biosynthetic process	0.00E+00
2	GO:0009560: embryo sac egg cell differentiation	0.00E+00
3	GO:0009095: aromatic amino acid family biosynthetic process, prephenate pathway	0.00E+00
4	GO:0019481: L-alanine catabolic process, by transamination	0.00E+00
5	GO:0051131: chaperone-mediated protein complex assembly	3.77E-06
6	GO:0009423: chorismate biosynthetic process	2.61E-05
7	GO:0009408: response to heat	6.61E-05
8	GO:0046686: response to cadmium ion	7.20E-05
9	GO:0018920: glyphosate metabolic process	8.78E-05
10	GO:0099636: cytoplasmic streaming	8.78E-05
11	GO:0034628: 'de novo' NAD biosynthetic process from aspartate	8.78E-05
12	GO:0009966: regulation of signal transduction	8.78E-05
13	GO:0015853: adenine transport	8.78E-05
14	GO:0042350: GDP-L-fucose biosynthetic process	8.78E-05
15	GO:0015854: guanine transport	8.78E-05
16	GO:0051014: actin filament severing	8.78E-05
17	GO:0071277: cellular response to calcium ion	8.78E-05
18	GO:0009073: aromatic amino acid family biosynthetic process	1.25E-04
19	GO:0010155: regulation of proton transport	2.08E-04
20	GO:0006611: protein export from nucleus	2.08E-04
21	GO:0010289: homogalacturonan biosynthetic process	2.08E-04
22	GO:0019521: D-gluconate metabolic process	2.08E-04
23	GO:0010372: positive regulation of gibberellin biosynthetic process	2.08E-04
24	GO:0061077: chaperone-mediated protein folding	3.29E-04
25	GO:0042351: 'de novo' GDP-L-fucose biosynthetic process	3.48E-04
26	GO:0051176: positive regulation of sulfur metabolic process	3.48E-04
27	GO:0000055: ribosomal large subunit export from nucleus	3.48E-04
28	GO:0010366: negative regulation of ethylene biosynthetic process	3.48E-04
29	GO:0010447: response to acidic pH	3.48E-04
30	GO:0070475: rRNA base methylation	3.48E-04
31	GO:0006457: protein folding	3.53E-04
32	GO:0009399: nitrogen fixation	5.01E-04
33	GO:0001709: cell fate determination	6.66E-04
34	GO:1902347: response to strigolactone	6.66E-04
35	GO:0051764: actin crosslink formation	6.66E-04
36	GO:0030041: actin filament polymerization	8.44E-04
37	GO:0007029: endoplasmic reticulum organization	8.44E-04
38	GO:0009435: NAD biosynthetic process	8.44E-04
39	GO:0009615: response to virus	9.37E-04
40	GO:0009816: defense response to bacterium, incompatible interaction	9.88E-04
41	GO:0006796: phosphate-containing compound metabolic process	1.03E-03
42	GO:0016070: RNA metabolic process	1.03E-03
43	GO:0000470: maturation of LSU-rRNA	1.03E-03
44	GO:0048317: seed morphogenesis	1.03E-03
45	GO:0009617: response to bacterium	1.05E-03
46	GO:0009094: L-phenylalanine biosynthetic process	1.23E-03
47	GO:0010311: lateral root formation	1.26E-03
48	GO:0009611: response to wounding	1.27E-03
49	GO:0007205: protein kinase C-activating G-protein coupled receptor signaling pathway	1.44E-03
50	GO:0010044: response to aluminum ion	1.44E-03
51	GO:0006744: ubiquinone biosynthetic process	1.44E-03
52	GO:0051693: actin filament capping	1.44E-03
53	GO:0016051: carbohydrate biosynthetic process	1.52E-03
54	GO:0006402: mRNA catabolic process	1.66E-03
55	GO:0050821: protein stabilization	1.66E-03
56	GO:0045010: actin nucleation	1.66E-03
57	GO:0048658: anther wall tapetum development	1.66E-03
58	GO:0042542: response to hydrogen peroxide	1.87E-03
59	GO:0009808: lignin metabolic process	1.89E-03
60	GO:0010208: pollen wall assembly	1.89E-03
61	GO:0009699: phenylpropanoid biosynthetic process	1.89E-03
62	GO:0080167: response to karrikin	1.90E-03
63	GO:0000184: nuclear-transcribed mRNA catabolic process, nonsense-mediated decay	2.14E-03
64	GO:0009060: aerobic respiration	2.14E-03
65	GO:0046685: response to arsenic-containing substance	2.14E-03
66	GO:0009051: pentose-phosphate shunt, oxidative branch	2.14E-03
67	GO:0008202: steroid metabolic process	2.39E-03
68	GO:0090332: stomatal closure	2.39E-03
69	GO:0030042: actin filament depolymerization	2.39E-03
70	GO:0048829: root cap development	2.65E-03
71	GO:0019538: protein metabolic process	2.65E-03
72	GO:0009750: response to fructose	2.93E-03
73	GO:0010015: root morphogenesis	2.93E-03
74	GO:0009698: phenylpropanoid metabolic process	2.93E-03
75	GO:0009737: response to abscisic acid	2.94E-03
76	GO:0010105: negative regulation of ethylene-activated signaling pathway	3.21E-03
77	GO:0007015: actin filament organization	3.80E-03
78	GO:0009266: response to temperature stimulus	3.80E-03
79	GO:0034605: cellular response to heat	3.80E-03
80	GO:0090351: seedling development	4.10E-03
81	GO:0010167: response to nitrate	4.10E-03
82	GO:0006863: purine nucleobase transport	4.42E-03
83	GO:0051017: actin filament bundle assembly	4.74E-03
84	GO:0007010: cytoskeleton organization	4.74E-03
85	GO:0010187: negative regulation of seed germination	4.74E-03
86	GO:0009845: seed germination	4.99E-03
87	GO:0043622: cortical microtubule organization	5.07E-03
88	GO:0016226: iron-sulfur cluster assembly	5.76E-03
89	GO:0030433: ubiquitin-dependent ERAD pathway	5.76E-03
90	GO:0040007: growth	6.12E-03
91	GO:0071215: cellular response to abscisic acid stimulus	6.12E-03
92	GO:0009686: gibberellin biosynthetic process	6.12E-03
93	GO:0009306: protein secretion	6.48E-03
94	GO:0010501: RNA secondary structure unwinding	7.24E-03
95	GO:0042631: cellular response to water deprivation	7.24E-03
96	GO:0007166: cell surface receptor signaling pathway	7.26E-03
97	GO:0009960: endosperm development	7.62E-03
98	GO:0009749: response to glucose	8.42E-03
99	GO:0031047: gene silencing by RNA	9.24E-03
100	GO:0032502: developmental process	9.24E-03
101	GO:0006468: protein phosphorylation	9.33E-03
102	GO:1901657: glycosyl compound metabolic process	9.67E-03
103	GO:0010090: trichome morphogenesis	9.67E-03
104	GO:0007267: cell-cell signaling	1.05E-02
105	GO:0010286: heat acclimation	1.05E-02
106	GO:0001666: response to hypoxia	1.14E-02
107	GO:0048366: leaf development	1.16E-02
108	GO:0048573: photoperiodism, flowering	1.28E-02
109	GO:0048767: root hair elongation	1.43E-02
110	GO:0006499: N-terminal protein myristoylation	1.48E-02
111	GO:0009834: plant-type secondary cell wall biogenesis	1.48E-02
112	GO:0010043: response to zinc ion	1.53E-02
113	GO:0045087: innate immune response	1.63E-02
114	GO:0006839: mitochondrial transport	1.79E-02
115	GO:0008283: cell proliferation	1.95E-02
116	GO:0009744: response to sucrose	1.95E-02
117	GO:0009644: response to high light intensity	2.06E-02
118	GO:0009965: leaf morphogenesis	2.12E-02
119	GO:0009809: lignin biosynthetic process	2.41E-02
120	GO:0006364: rRNA processing	2.41E-02
121	GO:0006857: oligopeptide transport	2.53E-02
122	GO:0006417: regulation of translation	2.60E-02
123	GO:0016569: covalent chromatin modification	2.97E-02
124	GO:0009553: embryo sac development	3.04E-02
125	GO:0009624: response to nematode	3.10E-02
126	GO:0009555: pollen development	3.21E-02
127	GO:0009742: brassinosteroid mediated signaling pathway	3.23E-02
128	GO:0000398: mRNA splicing, via spliceosome	3.44E-02
129	GO:0006413: translational initiation	4.35E-02

Rank	GO Term	Adjusted P value
1	GO:0033854: glutamate-prephenate aminotransferase activity	0.00E+00
2	GO:0030621: U4 snRNA binding	0.00E+00
3	GO:0033853: aspartate-prephenate aminotransferase activity	0.00E+00
4	GO:0004622: lysophospholipase activity	0.00E+00
5	GO:0008987: quinolinate synthetase A activity	0.00E+00
6	GO:0016710: trans-cinnamate 4-monooxygenase activity	0.00E+00
7	GO:0047734: CDP-glycerol diphosphatase activity	0.00E+00
8	GO:0003846: 2-acylglycerol O-acyltransferase activity	0.00E+00
9	GO:0009383: rRNA (cytosine-C5-)-methyltransferase activity	8.78E-05
10	GO:0017151: DEAD/H-box RNA helicase binding	8.78E-05
11	GO:0003866: 3-phosphoshikimate 1-carboxyvinyltransferase activity	8.78E-05
12	GO:0050577: GDP-L-fucose synthase activity	8.78E-05
13	GO:0090430: caffeoyl-CoA: alcohol caffeoyl transferase activity	8.78E-05
14	GO:0008114: phosphogluconate 2-dehydrogenase activity	8.78E-05
15	GO:0003849: 3-deoxy-7-phosphoheptulonate synthase activity	2.08E-04
16	GO:0051082: unfolded protein binding	4.27E-04
17	GO:0043023: ribosomal large subunit binding	5.01E-04
18	GO:0004021: L-alanine:2-oxoglutarate aminotransferase activity	5.01E-04
19	GO:0005524: ATP binding	5.08E-04
20	GO:0043015: gamma-tubulin binding	6.66E-04
21	GO:0018685: alkane 1-monooxygenase activity	8.44E-04
22	GO:0047631: ADP-ribose diphosphatase activity	8.44E-04
23	GO:0002020: protease binding	8.44E-04
24	GO:0004356: glutamate-ammonia ligase activity	8.44E-04
25	GO:0017070: U6 snRNA binding	8.44E-04
26	GO:0004069: L-aspartate:2-oxoglutarate aminotransferase activity	1.03E-03
27	GO:0016462: pyrophosphatase activity	1.03E-03
28	GO:0080130: L-phenylalanine:2-oxoglutarate aminotransferase activity	1.03E-03
29	GO:0035673: oligopeptide transmembrane transporter activity	1.03E-03
30	GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity	1.23E-03
31	GO:0004723: calcium-dependent protein serine/threonine phosphatase activity	1.23E-03
32	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	1.39E-03
33	GO:0004143: diacylglycerol kinase activity	1.44E-03
34	GO:0004427: inorganic diphosphatase activity	1.44E-03
35	GO:0003729: mRNA binding	1.56E-03
36	GO:0003951: NAD+ kinase activity	1.89E-03
37	GO:0008142: oxysterol binding	1.89E-03
38	GO:0008047: enzyme activator activity	2.65E-03
39	GO:0031625: ubiquitin protein ligase binding	2.88E-03
40	GO:0015198: oligopeptide transporter activity	3.21E-03
41	GO:0019888: protein phosphatase regulator activity	3.50E-03
42	GO:0003779: actin binding	3.58E-03
43	GO:0004674: protein serine/threonine kinase activity	3.86E-03
44	GO:0005345: purine nucleobase transmembrane transporter activity	5.07E-03
45	GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity	5.76E-03
46	GO:0001085: RNA polymerase II transcription factor binding	7.62E-03
47	GO:0050662: coenzyme binding	8.02E-03
48	GO:0016853: isomerase activity	8.02E-03
49	GO:0004518: nuclease activity	9.24E-03
50	GO:0051015: actin filament binding	9.67E-03
51	GO:0003682: chromatin binding	1.04E-02
52	GO:0050660: flavin adenine dinucleotide binding	1.14E-02
53	GO:0008375: acetylglucosaminyltransferase activity	1.24E-02
54	GO:0004004: ATP-dependent RNA helicase activity	1.28E-02
55	GO:0102483: scopolin beta-glucosidase activity	1.28E-02
56	GO:0030247: polysaccharide binding	1.28E-02
57	GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding	1.53E-02
58	GO:0016301: kinase activity	1.60E-02
59	GO:0008422: beta-glucosidase activity	1.74E-02
60	GO:0051539: 4 iron, 4 sulfur cluster binding	1.79E-02
61	GO:0009055: electron carrier activity	1.94E-02
62	GO:0043621: protein self-association	2.06E-02
63	GO:0035091: phosphatidylinositol binding	2.06E-02
64	GO:0022857: transmembrane transporter activity	2.97E-02
65	GO:0003676: nucleic acid binding	3.00E-02
66	GO:0008026: ATP-dependent helicase activity	3.23E-02
67	GO:0046872: metal ion binding	3.52E-02
68	GO:0030170: pyridoxal phosphate binding	3.92E-02
69	GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding	3.99E-02
70	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	4.35E-02
71	GO:0015297: antiporter activity	4.43E-02
72	GO:0008017: microtubule binding	4.73E-02

Rank	GO Term	Adjusted P value
1	GO:0009506: plasmodesma	2.57E-05
2	GO:0005886: plasma membrane	6.00E-05
3	GO:0016442: RISC complex	8.78E-05
4	GO:0030688: preribosome, small subunit precursor	8.78E-05
5	GO:0005829: cytosol	8.15E-04
6	GO:0016363: nuclear matrix	1.23E-03
7	GO:0046540: U4/U6 x U5 tri-snRNP complex	1.89E-03
8	GO:0010494: cytoplasmic stress granule	2.14E-03
9	GO:0005618: cell wall	2.52E-03
10	GO:0005794: Golgi apparatus	2.59E-03
11	GO:0048471: perinuclear region of cytoplasm	2.93E-03
12	GO:0005884: actin filament	2.93E-03
13	GO:0005774: vacuolar membrane	6.86E-03
14	GO:0005730: nucleolus	7.95E-03
15	GO:0000932: P-body	1.14E-02
16	GO:0005788: endoplasmic reticulum lumen	1.19E-02
17	GO:0005667: transcription factor complex	1.24E-02
18	GO:0019005: SCF ubiquitin ligase complex	1.38E-02
19	GO:0005743: mitochondrial inner membrane	1.68E-02
20	GO:0016020: membrane	1.77E-02
21	GO:0005856: cytoskeleton	2.12E-02
22	GO:0005783: endoplasmic reticulum	2.29E-02
23	GO:0005635: nuclear envelope	2.53E-02
24	GO:0005681: spliceosomal complex	2.72E-02
25	GO:0016607: nuclear speck	2.78E-02
26	GO:0005737: cytoplasm	3.05E-02
27	GO:0005623: cell	3.71E-02
28	GO:0009524: phragmoplast	3.78E-02