Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT2G47260

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0035437: maintenance of protein localization in endoplasmic reticulum0.00E+00
2GO:0010432: bract development0.00E+00
3GO:0071475: cellular hyperosmotic salinity response0.00E+00
4GO:0035024: negative regulation of Rho protein signal transduction0.00E+00
5GO:0080021: response to benzoic acid0.00E+00
6GO:0010451: floral meristem growth0.00E+00
7GO:0010412: mannan metabolic process0.00E+00
8GO:0019593: mannitol biosynthetic process0.00E+00
9GO:0009873: ethylene-activated signaling pathway7.84E-09
10GO:0010200: response to chitin7.01E-06
11GO:0042631: cellular response to water deprivation2.53E-05
12GO:0006355: regulation of transcription, DNA-templated1.45E-04
13GO:0035435: phosphate ion transmembrane transport1.76E-04
14GO:0070417: cellular response to cold3.32E-04
15GO:0009609: response to symbiotic bacterium3.55E-04
16GO:0009865: pollen tube adhesion3.55E-04
17GO:0042538: hyperosmotic salinity response4.86E-04
18GO:0098656: anion transmembrane transport5.70E-04
19GO:2000280: regulation of root development6.73E-04
20GO:0019760: glucosinolate metabolic process6.83E-04
21GO:0009737: response to abscisic acid6.98E-04
22GO:0006898: receptor-mediated endocytosis7.72E-04
23GO:1901679: nucleotide transmembrane transport7.72E-04
24GO:0015786: UDP-glucose transport7.72E-04
25GO:0010507: negative regulation of autophagy7.72E-04
26GO:0015709: thiosulfate transport7.72E-04
27GO:0071422: succinate transmembrane transport7.72E-04
28GO:0031407: oxylipin metabolic process7.72E-04
29GO:0010289: homogalacturonan biosynthetic process7.72E-04
30GO:0030148: sphingolipid biosynthetic process9.04E-04
31GO:0000038: very long-chain fatty acid metabolic process9.04E-04
32GO:0010105: negative regulation of ethylene-activated signaling pathway1.03E-03
33GO:0018107: peptidyl-threonine phosphorylation1.17E-03
34GO:0080121: AMP transport1.25E-03
35GO:0044210: 'de novo' CTP biosynthetic process1.25E-03
36GO:0016045: detection of bacterium1.25E-03
37GO:0010359: regulation of anion channel activity1.25E-03
38GO:0010288: response to lead ion1.25E-03
39GO:0090630: activation of GTPase activity1.25E-03
40GO:0009961: response to 1-aminocyclopropane-1-carboxylic acid1.25E-03
41GO:0015783: GDP-fucose transport1.25E-03
42GO:0010325: raffinose family oligosaccharide biosynthetic process1.25E-03
43GO:0006351: transcription, DNA-templated1.28E-03
44GO:0010025: wax biosynthetic process1.64E-03
45GO:0072334: UDP-galactose transmembrane transport1.80E-03
46GO:1901332: negative regulation of lateral root development1.80E-03
47GO:0080024: indolebutyric acid metabolic process1.80E-03
48GO:0006624: vacuolar protein processing1.80E-03
49GO:0010371: regulation of gibberellin biosynthetic process1.80E-03
50GO:0070301: cellular response to hydrogen peroxide1.80E-03
51GO:0015729: oxaloacetate transport1.80E-03
52GO:0006631: fatty acid metabolic process1.99E-03
53GO:0045490: pectin catabolic process2.13E-03
54GO:0031408: oxylipin biosynthetic process2.20E-03
55GO:0046355: mannan catabolic process2.42E-03
56GO:0022622: root system development2.42E-03
57GO:0071585: detoxification of cadmium ion2.42E-03
58GO:0015867: ATP transport2.42E-03
59GO:0042991: transcription factor import into nucleus2.42E-03
60GO:0046345: abscisic acid catabolic process2.42E-03
61GO:0015689: molybdate ion transport2.42E-03
62GO:0009831: plant-type cell wall modification involved in multidimensional cell growth2.63E-03
63GO:0009414: response to water deprivation2.63E-03
64GO:0001944: vasculature development2.63E-03
65GO:0032957: inositol trisphosphate metabolic process3.09E-03
66GO:0070897: DNA-templated transcriptional preinitiation complex assembly3.09E-03
67GO:0071423: malate transmembrane transport3.09E-03
68GO:0009823: cytokinin catabolic process3.09E-03
69GO:0009697: salicylic acid biosynthetic process3.09E-03
70GO:0006656: phosphatidylcholine biosynthetic process3.09E-03
71GO:0006873: cellular ion homeostasis3.09E-03
72GO:0048497: maintenance of floral organ identity3.09E-03
73GO:0006665: sphingolipid metabolic process3.09E-03
74GO:0042335: cuticle development3.34E-03
75GO:0045489: pectin biosynthetic process3.61E-03
76GO:0048868: pollen tube development3.61E-03
77GO:0047484: regulation of response to osmotic stress3.82E-03
78GO:1900425: negative regulation of defense response to bacterium3.82E-03
79GO:0010337: regulation of salicylic acid metabolic process3.82E-03
80GO:0006751: glutathione catabolic process3.82E-03
81GO:0015866: ADP transport3.82E-03
82GO:0010183: pollen tube guidance4.16E-03
83GO:0048367: shoot system development4.17E-03
84GO:0000302: response to reactive oxygen species4.45E-03
85GO:2000033: regulation of seed dormancy process4.60E-03
86GO:0045926: negative regulation of growth4.60E-03
87GO:0010016: shoot system morphogenesis4.60E-03
88GO:0098655: cation transmembrane transport4.60E-03
89GO:0010555: response to mannitol4.60E-03
90GO:0006970: response to osmotic stress4.64E-03
91GO:0042545: cell wall modification4.88E-03
92GO:0009828: plant-type cell wall loosening5.40E-03
93GO:0030497: fatty acid elongation5.44E-03
94GO:0008272: sulfate transport5.44E-03
95GO:1902074: response to salt5.44E-03
96GO:0010103: stomatal complex morphogenesis5.44E-03
97GO:0032880: regulation of protein localization5.44E-03
98GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway5.44E-03
99GO:0080167: response to karrikin5.75E-03
100GO:0009061: anaerobic respiration6.32E-03
101GO:0035265: organ growth6.32E-03
102GO:0009819: drought recovery6.32E-03
103GO:0009938: negative regulation of gibberellic acid mediated signaling pathway6.32E-03
104GO:0042255: ribosome assembly6.32E-03
105GO:0006353: DNA-templated transcription, termination6.32E-03
106GO:0009690: cytokinin metabolic process6.32E-03
107GO:2000070: regulation of response to water deprivation6.32E-03
108GO:0007155: cell adhesion6.32E-03
109GO:0010029: regulation of seed germination6.81E-03
110GO:0009827: plant-type cell wall modification7.25E-03
111GO:0009611: response to wounding7.66E-03
112GO:0006098: pentose-phosphate shunt8.22E-03
113GO:0009790: embryo development8.23E-03
114GO:0006633: fatty acid biosynthetic process9.04E-03
115GO:0048268: clathrin coat assembly9.24E-03
116GO:0042761: very long-chain fatty acid biosynthetic process9.24E-03
117GO:0009631: cold acclimation9.74E-03
118GO:0009751: response to salicylic acid1.02E-02
119GO:0055062: phosphate ion homeostasis1.03E-02
120GO:0009641: shade avoidance1.03E-02
121GO:0006949: syncytium formation1.03E-02
122GO:0055085: transmembrane transport1.12E-02
123GO:0052544: defense response by callose deposition in cell wall1.14E-02
124GO:0009739: response to gibberellin1.18E-02
125GO:0006470: protein dephosphorylation1.21E-02
126GO:0006839: mitochondrial transport1.22E-02
127GO:0016024: CDP-diacylglycerol biosynthetic process1.26E-02
128GO:0010582: floral meristem determinacy1.26E-02
129GO:2000012: regulation of auxin polar transport1.38E-02
130GO:0010102: lateral root morphogenesis1.38E-02
131GO:0009640: photomorphogenesis1.38E-02
132GO:0050826: response to freezing1.38E-02
133GO:0009725: response to hormone1.38E-02
134GO:0005986: sucrose biosynthetic process1.38E-02
135GO:0010143: cutin biosynthetic process1.50E-02
136GO:0010540: basipetal auxin transport1.50E-02
137GO:0009409: response to cold1.52E-02
138GO:0010167: response to nitrate1.62E-02
139GO:0070588: calcium ion transmembrane transport1.62E-02
140GO:0009664: plant-type cell wall organization1.74E-02
141GO:0009833: plant-type primary cell wall biogenesis1.76E-02
142GO:0009863: salicylic acid mediated signaling pathway1.89E-02
143GO:0010187: negative regulation of seed germination1.89E-02
144GO:2000377: regulation of reactive oxygen species metabolic process1.89E-02
145GO:0009695: jasmonic acid biosynthetic process2.03E-02
146GO:0009269: response to desiccation2.17E-02
147GO:0043086: negative regulation of catalytic activity2.21E-02
148GO:0080092: regulation of pollen tube growth2.31E-02
149GO:0071215: cellular response to abscisic acid stimulus2.46E-02
150GO:0071555: cell wall organization2.48E-02
151GO:0048443: stamen development2.61E-02
152GO:0009624: response to nematode2.66E-02
153GO:0018105: peptidyl-serine phosphorylation2.74E-02
154GO:0009789: positive regulation of abscisic acid-activated signaling pathway2.77E-02
155GO:0008284: positive regulation of cell proliferation2.77E-02
156GO:0000226: microtubule cytoskeleton organization2.92E-02
157GO:0016567: protein ubiquitination2.95E-02
158GO:0009960: endosperm development3.08E-02
159GO:0071472: cellular response to salt stress3.08E-02
160GO:0010154: fruit development3.08E-02
161GO:0009958: positive gravitropism3.08E-02
162GO:0010268: brassinosteroid homeostasis3.08E-02
163GO:0080156: mitochondrial mRNA modification3.58E-02
164GO:0048510: regulation of timing of transition from vegetative to reproductive phase3.58E-02
165GO:0010193: response to ozone3.58E-02
166GO:0006891: intra-Golgi vesicle-mediated transport3.58E-02
167GO:0016132: brassinosteroid biosynthetic process3.58E-02
168GO:0032502: developmental process3.75E-02
169GO:1901657: glycosyl compound metabolic process3.93E-02
170GO:0048364: root development3.99E-02
171GO:0016125: sterol metabolic process4.11E-02
172GO:0010252: auxin homeostasis4.11E-02
173GO:0009639: response to red or far red light4.11E-02
174GO:0006904: vesicle docking involved in exocytosis4.29E-02
175GO:0010150: leaf senescence4.58E-02
176GO:0009911: positive regulation of flower development4.65E-02
177GO:0009788: negative regulation of abscisic acid-activated signaling pathway4.84E-02
178GO:0005975: carbohydrate metabolic process4.93E-02
RankGO TermAdjusted P value
1GO:0017048: Rho GTPase binding0.00E+00
2GO:0008419: RNA lariat debranching enzyme activity0.00E+00
3GO:0052631: sphingolipid delta-8 desaturase activity0.00E+00
4GO:0009922: fatty acid elongase activity1.50E-06
5GO:0016629: 12-oxophytodienoate reductase activity5.67E-06
6GO:0043565: sequence-specific DNA binding1.73E-05
7GO:0003883: CTP synthase activity4.39E-05
8GO:0003700: transcription factor activity, sequence-specific DNA binding6.53E-05
9GO:0102336: 3-oxo-arachidoyl-CoA synthase activity1.34E-04
10GO:0102337: 3-oxo-cerotoyl-CoA synthase activity1.34E-04
11GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity1.34E-04
12GO:0044212: transcription regulatory region DNA binding2.62E-04
13GO:0004105: choline-phosphate cytidylyltransferase activity3.55E-04
14GO:0052638: indole-3-butyrate beta-glucosyltransferase activity3.55E-04
15GO:0003677: DNA binding7.28E-04
16GO:0015117: thiosulfate transmembrane transporter activity7.72E-04
17GO:1901677: phosphate transmembrane transporter activity7.72E-04
18GO:0017022: myosin binding7.72E-04
19GO:0001047: core promoter binding7.72E-04
20GO:0017040: ceramidase activity7.72E-04
21GO:0003839: gamma-glutamylcyclotransferase activity7.72E-04
22GO:0070330: aromatase activity1.25E-03
23GO:0005310: dicarboxylic acid transmembrane transporter activity1.25E-03
24GO:0047274: galactinol-sucrose galactosyltransferase activity1.25E-03
25GO:0015141: succinate transmembrane transporter activity1.25E-03
26GO:0052726: inositol-1,3,4-trisphosphate 5-kinase activity1.25E-03
27GO:0010295: (+)-abscisic acid 8'-hydroxylase activity1.25E-03
28GO:0005457: GDP-fucose transmembrane transporter activity1.25E-03
29GO:0047325: inositol tetrakisphosphate 1-kinase activity1.25E-03
30GO:0008083: growth factor activity1.31E-03
31GO:0015131: oxaloacetate transmembrane transporter activity1.80E-03
32GO:0005460: UDP-glucose transmembrane transporter activity1.80E-03
33GO:0052725: inositol-1,3,4-trisphosphate 6-kinase activity1.80E-03
34GO:0015098: molybdate ion transmembrane transporter activity2.42E-03
35GO:0016985: mannan endo-1,4-beta-mannosidase activity2.42E-03
36GO:0005459: UDP-galactose transmembrane transporter activity3.09E-03
37GO:0019139: cytokinin dehydrogenase activity3.09E-03
38GO:0080122: AMP transmembrane transporter activity3.09E-03
39GO:0018685: alkane 1-monooxygenase activity3.09E-03
40GO:0070696: transmembrane receptor protein serine/threonine kinase binding3.09E-03
41GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds3.67E-03
42GO:0045330: aspartyl esterase activity3.68E-03
43GO:0004366: glycerol-3-phosphate O-acyltransferase activity3.82E-03
44GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity3.82E-03
45GO:0010181: FMN binding3.88E-03
46GO:0005347: ATP transmembrane transporter activity4.60E-03
47GO:0015217: ADP transmembrane transporter activity4.60E-03
48GO:0030599: pectinesterase activity4.70E-03
49GO:0016621: cinnamoyl-CoA reductase activity5.44E-03
50GO:0015140: malate transmembrane transporter activity5.44E-03
51GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity5.73E-03
52GO:0016209: antioxidant activity6.32E-03
53GO:0008308: voltage-gated anion channel activity7.25E-03
54GO:0008757: S-adenosylmethionine-dependent methyltransferase activity8.00E-03
55GO:0000989: transcription factor activity, transcription factor binding8.22E-03
56GO:0004722: protein serine/threonine phosphatase activity8.71E-03
57GO:0005096: GTPase activator activity8.84E-03
58GO:0009672: auxin:proton symporter activity9.24E-03
59GO:0046910: pectinesterase inhibitor activity9.32E-03
60GO:0005545: 1-phosphatidylinositol binding1.03E-02
61GO:0015116: sulfate transmembrane transporter activity1.26E-02
62GO:0015114: phosphate ion transmembrane transporter activity1.38E-02
63GO:0010329: auxin efflux transmembrane transporter activity1.38E-02
64GO:0005315: inorganic phosphate transmembrane transporter activity1.38E-02
65GO:0005262: calcium channel activity1.38E-02
66GO:0042973: glucan endo-1,3-beta-D-glucosidase activity1.50E-02
67GO:0004842: ubiquitin-protein transferase activity1.59E-02
68GO:0008146: sulfotransferase activity1.62E-02
69GO:0017025: TBP-class protein binding1.62E-02
70GO:0004857: enzyme inhibitor activity1.89E-02
71GO:0035251: UDP-glucosyltransferase activity2.17E-02
72GO:0004707: MAP kinase activity2.17E-02
73GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity2.31E-02
74GO:0080044: quercetin 7-O-glucosyltransferase activity2.43E-02
75GO:0080043: quercetin 3-O-glucosyltransferase activity2.43E-02
76GO:0030570: pectate lyase activity2.46E-02
77GO:0003727: single-stranded RNA binding2.61E-02
78GO:0008514: organic anion transmembrane transporter activity2.61E-02
79GO:0016746: transferase activity, transferring acyl groups2.74E-02
80GO:0030276: clathrin binding3.08E-02
81GO:0016758: transferase activity, transferring hexosyl groups3.24E-02
82GO:0004872: receptor activity3.41E-02
83GO:0004197: cysteine-type endopeptidase activity3.75E-02
84GO:0015144: carbohydrate transmembrane transporter activity3.98E-02
85GO:0016791: phosphatase activity4.11E-02
86GO:0004675: transmembrane receptor protein serine/threonine kinase activity4.27E-02
87GO:0016722: oxidoreductase activity, oxidizing metal ions4.29E-02
88GO:0015297: antiporter activity4.37E-02
89GO:0016413: O-acetyltransferase activity4.47E-02
90GO:0005351: sugar:proton symporter activity4.48E-02
RankGO TermAdjusted P value
1GO:0070382: exocytic vesicle3.55E-04
2GO:0031357: integral component of chloroplast inner membrane7.72E-04
3GO:0030133: transport vesicle7.72E-04
4GO:0005618: cell wall1.54E-03
5GO:0045177: apical part of cell1.80E-03
6GO:0005622: intracellular2.08E-03
7GO:0046658: anchored component of plasma membrane3.26E-03
8GO:0000793: condensed chromosome3.82E-03
9GO:0009505: plant-type cell wall4.54E-03
10GO:0000794: condensed nuclear chromosome5.44E-03
11GO:0005768: endosome6.90E-03
12GO:0016604: nuclear body9.24E-03
13GO:0005938: cell cortex1.38E-02
14GO:0009508: plastid chromosome1.38E-02
15GO:0031012: extracellular matrix1.38E-02
16GO:0005795: Golgi stack1.62E-02
17GO:0005802: trans-Golgi network1.67E-02
18GO:0005905: clathrin-coated pit2.17E-02
19GO:0016021: integral component of membrane2.40E-02
20GO:0030136: clathrin-coated vesicle2.77E-02
21GO:0005743: mitochondrial inner membrane3.46E-02
22GO:0000145: exocyst3.75E-02
23GO:0009295: nucleoid4.29E-02
24GO:0031225: anchored component of membrane4.69E-02
25GO:0005788: endoplasmic reticulum lumen4.84E-02
26GO:0005789: endoplasmic reticulum membrane4.98E-02
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Gene type



Gene DE type