Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT2G47060

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0070328: triglyceride homeostasis0.00E+00
2GO:0055091: phospholipid homeostasis0.00E+00
3GO:0035024: negative regulation of Rho protein signal transduction0.00E+00
4GO:0071475: cellular hyperosmotic salinity response0.00E+00
5GO:0080021: response to benzoic acid0.00E+00
6GO:0010412: mannan metabolic process0.00E+00
7GO:0032953: regulation of (1->3)-beta-D-glucan biosynthetic process0.00E+00
8GO:0019593: mannitol biosynthetic process0.00E+00
9GO:0090630: activation of GTPase activity3.05E-05
10GO:0006355: regulation of transcription, DNA-templated1.38E-04
11GO:0010200: response to chitin1.47E-04
12GO:0009873: ethylene-activated signaling pathway1.57E-04
13GO:0010025: wax biosynthetic process2.19E-04
14GO:0047484: regulation of response to osmotic stress2.53E-04
15GO:0035435: phosphate ion transmembrane transport2.53E-04
16GO:0009609: response to symbiotic bacterium4.48E-04
17GO:1902265: abscisic acid homeostasis4.48E-04
18GO:0097298: regulation of nucleus size4.48E-04
19GO:0046938: phytochelatin biosynthetic process4.48E-04
20GO:0009865: pollen tube adhesion4.48E-04
21GO:0031338: regulation of vesicle fusion4.48E-04
22GO:0009409: response to cold5.26E-04
23GO:0009819: drought recovery5.46E-04
24GO:0042335: cuticle development5.75E-04
25GO:0042631: cellular response to water deprivation5.75E-04
26GO:0045489: pectin biosynthetic process6.33E-04
27GO:0009827: plant-type cell wall modification6.66E-04
28GO:0009737: response to abscisic acid7.03E-04
29GO:0006351: transcription, DNA-templated7.91E-04
30GO:0042538: hyperosmotic salinity response8.28E-04
31GO:0015786: UDP-glucose transport9.67E-04
32GO:1901679: nucleotide transmembrane transport9.67E-04
33GO:0006898: receptor-mediated endocytosis9.67E-04
34GO:0010507: negative regulation of autophagy9.67E-04
35GO:0015709: thiosulfate transport9.67E-04
36GO:0071422: succinate transmembrane transport9.67E-04
37GO:0031407: oxylipin metabolic process9.67E-04
38GO:0010289: homogalacturonan biosynthetic process9.67E-04
39GO:0055088: lipid homeostasis9.67E-04
40GO:0006470: protein dephosphorylation1.01E-03
41GO:0019760: glucosinolate metabolic process1.05E-03
42GO:0052544: defense response by callose deposition in cell wall1.26E-03
43GO:0000038: very long-chain fatty acid metabolic process1.26E-03
44GO:0042344: indole glucosinolate catabolic process1.57E-03
45GO:0044210: 'de novo' CTP biosynthetic process1.57E-03
46GO:0016045: detection of bacterium1.57E-03
47GO:0010359: regulation of anion channel activity1.57E-03
48GO:0080121: AMP transport1.57E-03
49GO:0010288: response to lead ion1.57E-03
50GO:0046786: viral replication complex formation and maintenance1.57E-03
51GO:0009961: response to 1-aminocyclopropane-1-carboxylic acid1.57E-03
52GO:0015783: GDP-fucose transport1.57E-03
53GO:0010325: raffinose family oligosaccharide biosynthetic process1.57E-03
54GO:0070588: calcium ion transmembrane transport2.07E-03
55GO:0006811: ion transport2.09E-03
56GO:0072334: UDP-galactose transmembrane transport2.28E-03
57GO:0043481: anthocyanin accumulation in tissues in response to UV light2.28E-03
58GO:0030100: regulation of endocytosis2.28E-03
59GO:0015700: arsenite transport2.28E-03
60GO:0080024: indolebutyric acid metabolic process2.28E-03
61GO:0055089: fatty acid homeostasis2.28E-03
62GO:0010371: regulation of gibberellin biosynthetic process2.28E-03
63GO:1901000: regulation of response to salt stress2.28E-03
64GO:0070301: cellular response to hydrogen peroxide2.28E-03
65GO:0015729: oxaloacetate transport2.28E-03
66GO:0016051: carbohydrate biosynthetic process2.49E-03
67GO:0046355: mannan catabolic process3.06E-03
68GO:0022622: root system development3.06E-03
69GO:0071585: detoxification of cadmium ion3.06E-03
70GO:0015867: ATP transport3.06E-03
71GO:0009687: abscisic acid metabolic process3.06E-03
72GO:0046345: abscisic acid catabolic process3.06E-03
73GO:0015689: molybdate ion transport3.06E-03
74GO:0051365: cellular response to potassium ion starvation3.06E-03
75GO:0031408: oxylipin biosynthetic process3.11E-03
76GO:0045490: pectin catabolic process3.63E-03
77GO:0001944: vasculature development3.71E-03
78GO:0009697: salicylic acid biosynthetic process3.93E-03
79GO:0070897: DNA-templated transcriptional preinitiation complex assembly3.93E-03
80GO:0071423: malate transmembrane transport3.93E-03
81GO:0009823: cytokinin catabolic process3.93E-03
82GO:0006873: cellular ion homeostasis3.93E-03
83GO:0006656: phosphatidylcholine biosynthetic process3.93E-03
84GO:0048497: maintenance of floral organ identity3.93E-03
85GO:0006461: protein complex assembly3.93E-03
86GO:0006665: sphingolipid metabolic process3.93E-03
87GO:0032957: inositol trisphosphate metabolic process3.93E-03
88GO:0070417: cellular response to cold4.38E-03
89GO:0009611: response to wounding4.43E-03
90GO:0010468: regulation of gene expression4.76E-03
91GO:0009913: epidermal cell differentiation4.86E-03
92GO:1900425: negative regulation of defense response to bacterium4.86E-03
93GO:0010337: regulation of salicylic acid metabolic process4.86E-03
94GO:0006751: glutathione catabolic process4.86E-03
95GO:0015866: ADP transport4.86E-03
96GO:0009751: response to salicylic acid4.88E-03
97GO:0009414: response to water deprivation5.67E-03
98GO:1901001: negative regulation of response to salt stress5.87E-03
99GO:0045926: negative regulation of growth5.87E-03
100GO:0010016: shoot system morphogenesis5.87E-03
101GO:2000033: regulation of seed dormancy process5.87E-03
102GO:0098655: cation transmembrane transport5.87E-03
103GO:0010555: response to mannitol5.87E-03
104GO:0071470: cellular response to osmotic stress5.87E-03
105GO:0000302: response to reactive oxygen species6.31E-03
106GO:0048367: shoot system development6.51E-03
107GO:0030497: fatty acid elongation6.93E-03
108GO:0008272: sulfate transport6.93E-03
109GO:1902074: response to salt6.93E-03
110GO:0010103: stomatal complex morphogenesis6.93E-03
111GO:0032880: regulation of protein localization6.93E-03
112GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway6.93E-03
113GO:0042545: cell wall modification7.63E-03
114GO:0006970: response to osmotic stress7.91E-03
115GO:0009624: response to nematode7.93E-03
116GO:0008610: lipid biosynthetic process8.07E-03
117GO:0035265: organ growth8.07E-03
118GO:0009938: negative regulation of gibberellic acid mediated signaling pathway8.07E-03
119GO:0042255: ribosome assembly8.07E-03
120GO:0009690: cytokinin metabolic process8.07E-03
121GO:0006353: DNA-templated transcription, termination8.07E-03
122GO:0009704: de-etiolation8.07E-03
123GO:0007155: cell adhesion8.07E-03
124GO:0006997: nucleus organization9.27E-03
125GO:0010029: regulation of seed germination9.69E-03
126GO:0080167: response to karrikin9.81E-03
127GO:0006098: pentose-phosphate shunt1.05E-02
128GO:0090305: nucleic acid phosphodiester bond hydrolysis1.05E-02
129GO:0098656: anion transmembrane transport1.05E-02
130GO:0046685: response to arsenic-containing substance1.05E-02
131GO:0042761: very long-chain fatty acid biosynthetic process1.18E-02
132GO:0048268: clathrin coat assembly1.18E-02
133GO:2000280: regulation of root development1.18E-02
134GO:0007346: regulation of mitotic cell cycle1.18E-02
135GO:0009641: shade avoidance1.32E-02
136GO:0006949: syncytium formation1.32E-02
137GO:0009631: cold acclimation1.39E-02
138GO:0006633: fatty acid biosynthetic process1.41E-02
139GO:0048765: root hair cell differentiation1.46E-02
140GO:0016024: CDP-diacylglycerol biosynthetic process1.61E-02
141GO:0045037: protein import into chloroplast stroma1.61E-02
142GO:0010105: negative regulation of ethylene-activated signaling pathway1.61E-02
143GO:0000266: mitochondrial fission1.61E-02
144GO:0006979: response to oxidative stress1.70E-02
145GO:0006839: mitochondrial transport1.74E-02
146GO:2000012: regulation of auxin polar transport1.77E-02
147GO:0030048: actin filament-based movement1.77E-02
148GO:0050826: response to freezing1.77E-02
149GO:0018107: peptidyl-threonine phosphorylation1.77E-02
150GO:0009725: response to hormone1.77E-02
151GO:0005986: sucrose biosynthetic process1.77E-02
152GO:0006631: fatty acid metabolic process1.81E-02
153GO:0006897: endocytosis1.81E-02
154GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process1.84E-02
155GO:0009739: response to gibberellin1.84E-02
156GO:0048364: root development1.88E-02
157GO:0010143: cutin biosynthetic process1.92E-02
158GO:0048467: gynoecium development1.92E-02
159GO:0009744: response to sucrose1.97E-02
160GO:0010167: response to nitrate2.09E-02
161GO:0010030: positive regulation of seed germination2.09E-02
162GO:0006636: unsaturated fatty acid biosynthetic process2.26E-02
163GO:0009833: plant-type primary cell wall biogenesis2.26E-02
164GO:0009863: salicylic acid mediated signaling pathway2.43E-02
165GO:0030150: protein import into mitochondrial matrix2.43E-02
166GO:0010187: negative regulation of seed germination2.43E-02
167GO:0006289: nucleotide-excision repair2.43E-02
168GO:2000377: regulation of reactive oxygen species metabolic process2.43E-02
169GO:0009695: jasmonic acid biosynthetic process2.61E-02
170GO:0007017: microtubule-based process2.61E-02
171GO:0016567: protein ubiquitination2.71E-02
172GO:0009269: response to desiccation2.79E-02
173GO:0051321: meiotic cell cycle2.79E-02
174GO:0080092: regulation of pollen tube growth2.97E-02
175GO:0043086: negative regulation of catalytic activity3.14E-02
176GO:0009831: plant-type cell wall modification involved in multidimensional cell growth3.16E-02
177GO:0071215: cellular response to abscisic acid stimulus3.16E-02
178GO:0009651: response to salt stress3.35E-02
179GO:0048443: stamen development3.36E-02
180GO:0006284: base-excision repair3.36E-02
181GO:0010584: pollen exine formation3.36E-02
182GO:0009789: positive regulation of abscisic acid-activated signaling pathway3.56E-02
183GO:0008284: positive regulation of cell proliferation3.56E-02
184GO:0000226: microtubule cytoskeleton organization3.76E-02
185GO:0009960: endosperm development3.96E-02
186GO:0009958: positive gravitropism3.96E-02
187GO:0071472: cellular response to salt stress3.96E-02
188GO:0010154: fruit development3.96E-02
189GO:0048868: pollen tube development3.96E-02
190GO:0010268: brassinosteroid homeostasis3.96E-02
191GO:0010183: pollen tube guidance4.38E-02
192GO:0009749: response to glucose4.38E-02
193GO:0008654: phospholipid biosynthetic process4.38E-02
194GO:0071555: cell wall organization4.44E-02
195GO:0045892: negative regulation of transcription, DNA-templated4.59E-02
196GO:0080156: mitochondrial mRNA modification4.60E-02
197GO:0048510: regulation of timing of transition from vegetative to reproductive phase4.60E-02
198GO:0006891: intra-Golgi vesicle-mediated transport4.60E-02
199GO:0010193: response to ozone4.60E-02
200GO:0016132: brassinosteroid biosynthetic process4.60E-02
201GO:0010583: response to cyclopentenone4.82E-02
202GO:0032502: developmental process4.82E-02
RankGO TermAdjusted P value
1GO:0017048: Rho GTPase binding0.00E+00
2GO:0042171: lysophosphatidic acid acyltransferase activity0.00E+00
3GO:0016629: 12-oxophytodienoate reductase activity8.88E-06
4GO:0003883: CTP synthase activity6.61E-05
5GO:0043565: sequence-specific DNA binding1.09E-04
6GO:0003700: transcription factor activity, sequence-specific DNA binding3.70E-04
7GO:0004105: choline-phosphate cytidylyltransferase activity4.48E-04
8GO:0046870: cadmium ion binding4.48E-04
9GO:0052638: indole-3-butyrate beta-glucosyltransferase activity4.48E-04
10GO:0015446: ATPase-coupled arsenite transmembrane transporter activity4.48E-04
11GO:0071992: phytochelatin transmembrane transporter activity4.48E-04
12GO:0008534: oxidized purine nucleobase lesion DNA N-glycosylase activity4.48E-04
13GO:0015117: thiosulfate transmembrane transporter activity9.67E-04
14GO:0048531: beta-1,3-galactosyltransferase activity9.67E-04
15GO:1901677: phosphate transmembrane transporter activity9.67E-04
16GO:0017022: myosin binding9.67E-04
17GO:0042389: omega-3 fatty acid desaturase activity9.67E-04
18GO:0017040: ceramidase activity9.67E-04
19GO:0003839: gamma-glutamylcyclotransferase activity9.67E-04
20GO:0047216: inositol 3-alpha-galactosyltransferase activity9.67E-04
21GO:0005310: dicarboxylic acid transmembrane transporter activity1.57E-03
22GO:0047274: galactinol-sucrose galactosyltransferase activity1.57E-03
23GO:0010295: (+)-abscisic acid 8'-hydroxylase activity1.57E-03
24GO:0015141: succinate transmembrane transporter activity1.57E-03
25GO:0052726: inositol-1,3,4-trisphosphate 5-kinase activity1.57E-03
26GO:0005457: GDP-fucose transmembrane transporter activity1.57E-03
27GO:0047325: inositol tetrakisphosphate 1-kinase activity1.57E-03
28GO:0016746: transferase activity, transferring acyl groups1.64E-03
29GO:0008083: growth factor activity1.85E-03
30GO:0005096: GTPase activator activity1.96E-03
31GO:0044212: transcription regulatory region DNA binding2.05E-03
32GO:0016756: glutathione gamma-glutamylcysteinyltransferase activity2.28E-03
33GO:0015131: oxaloacetate transmembrane transporter activity2.28E-03
34GO:0005460: UDP-glucose transmembrane transporter activity2.28E-03
35GO:0052725: inositol-1,3,4-trisphosphate 6-kinase activity2.28E-03
36GO:0102336: 3-oxo-arachidoyl-CoA synthase activity2.31E-03
37GO:0102337: 3-oxo-cerotoyl-CoA synthase activity2.31E-03
38GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity2.31E-03
39GO:0015098: molybdate ion transmembrane transporter activity3.06E-03
40GO:0003841: 1-acylglycerol-3-phosphate O-acyltransferase activity3.06E-03
41GO:0016985: mannan endo-1,4-beta-mannosidase activity3.06E-03
42GO:0019104: DNA N-glycosylase activity3.06E-03
43GO:0004707: MAP kinase activity3.11E-03
44GO:0009922: fatty acid elongase activity3.93E-03
45GO:0005459: UDP-galactose transmembrane transporter activity3.93E-03
46GO:0019139: cytokinin dehydrogenase activity3.93E-03
47GO:0004623: phospholipase A2 activity3.93E-03
48GO:0080122: AMP transmembrane transporter activity3.93E-03
49GO:0017137: Rab GTPase binding3.93E-03
50GO:0070696: transmembrane receptor protein serine/threonine kinase binding3.93E-03
51GO:0010294: abscisic acid glucosyltransferase activity3.93E-03
52GO:0004722: protein serine/threonine phosphatase activity4.07E-03
53GO:0004366: glycerol-3-phosphate O-acyltransferase activity4.86E-03
54GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity4.86E-03
55GO:0010181: FMN binding5.49E-03
56GO:0045330: aspartyl esterase activity5.75E-03
57GO:0005347: ATP transmembrane transporter activity5.87E-03
58GO:0015217: ADP transmembrane transporter activity5.87E-03
59GO:0016621: cinnamoyl-CoA reductase activity6.93E-03
60GO:0015140: malate transmembrane transporter activity6.93E-03
61GO:0080043: quercetin 3-O-glucosyltransferase activity7.06E-03
62GO:0080044: quercetin 7-O-glucosyltransferase activity7.06E-03
63GO:0030599: pectinesterase activity7.34E-03
64GO:0015288: porin activity8.07E-03
65GO:0016209: antioxidant activity8.07E-03
66GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity8.15E-03
67GO:0008308: voltage-gated anion channel activity9.27E-03
68GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water9.27E-03
69GO:0016758: transferase activity, transferring hexosyl groups1.02E-02
70GO:0000989: transcription factor activity, transcription factor binding1.05E-02
71GO:0008757: S-adenosylmethionine-dependent methyltransferase activity1.14E-02
72GO:0005545: 1-phosphatidylinositol binding1.32E-02
73GO:0015020: glucuronosyltransferase activity1.32E-02
74GO:0046910: pectinesterase inhibitor activity1.46E-02
75GO:0005543: phospholipid binding1.46E-02
76GO:0015297: antiporter activity1.50E-02
77GO:0015116: sulfate transmembrane transporter activity1.61E-02
78GO:0015114: phosphate ion transmembrane transporter activity1.77E-02
79GO:0005388: calcium-transporting ATPase activity1.77E-02
80GO:0015266: protein channel activity1.77E-02
81GO:0005262: calcium channel activity1.77E-02
82GO:0042973: glucan endo-1,3-beta-D-glucosidase activity1.92E-02
83GO:0003774: motor activity1.92E-02
84GO:0017025: TBP-class protein binding2.09E-02
85GO:0008146: sulfotransferase activity2.09E-02
86GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds2.18E-02
87GO:0003677: DNA binding2.20E-02
88GO:0004857: enzyme inhibitor activity2.43E-02
89GO:0043130: ubiquitin binding2.43E-02
90GO:0016298: lipase activity2.75E-02
91GO:0035251: UDP-glucosyltransferase activity2.79E-02
92GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity2.97E-02
93GO:0004842: ubiquitin-protein transferase activity3.08E-02
94GO:0030570: pectate lyase activity3.16E-02
95GO:0003727: single-stranded RNA binding3.36E-02
96GO:0061630: ubiquitin protein ligase activity3.84E-02
97GO:0030276: clathrin binding3.96E-02
98GO:0004872: receptor activity4.38E-02
99GO:0004518: nuclease activity4.82E-02
RankGO TermAdjusted P value
1GO:0034426: etioplast membrane0.00E+00
2GO:0031357: integral component of chloroplast inner membrane8.88E-06
3GO:0070382: exocytic vesicle4.48E-04
4GO:0042170: plastid membrane9.67E-04
5GO:0030133: transport vesicle9.67E-04
6GO:0005652: nuclear lamina1.57E-03
7GO:0045177: apical part of cell2.28E-03
8GO:0009527: plastid outer membrane3.06E-03
9GO:0005905: clathrin-coated pit3.11E-03
10GO:0030136: clathrin-coated vesicle4.38E-03
11GO:0005622: intracellular4.50E-03
12GO:0000793: condensed chromosome4.86E-03
13GO:0005798: Golgi-associated vesicle4.86E-03
14GO:0046658: anchored component of plasma membrane5.57E-03
15GO:0000794: condensed nuclear chromosome6.93E-03
16GO:0034399: nuclear periphery8.07E-03
17GO:0031305: integral component of mitochondrial inner membrane8.07E-03
18GO:0046930: pore complex9.27E-03
19GO:0005618: cell wall1.00E-02
20GO:0045298: tubulin complex1.05E-02
21GO:0016604: nuclear body1.18E-02
22GO:0005768: endosome1.37E-02
23GO:0009508: plastid chromosome1.77E-02
24GO:0005938: cell cortex1.77E-02
25GO:0031012: extracellular matrix1.77E-02
26GO:0043231: intracellular membrane-bounded organelle2.04E-02
27GO:0005795: Golgi stack2.09E-02
28GO:0005769: early endosome2.26E-02
29GO:0009505: plant-type cell wall2.57E-02
30GO:0031225: anchored component of membrane2.89E-02
31GO:0005802: trans-Golgi network3.02E-02
32GO:0016607: nuclear speck3.24E-02
33GO:0005744: mitochondrial inner membrane presequence translocase complex3.36E-02
34GO:0016021: integral component of membrane4.19E-02
35GO:0031965: nuclear membrane4.38E-02
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Gene type



Gene DE type