co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT2G46860

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0019481: L-alanine catabolic process, by transamination	0.00E+00
2	GO:0032499: detection of peptidoglycan	0.00E+00
3	GO:0002752: cell surface pattern recognition receptor signaling pathway	0.00E+00
4	GO:0007141: male meiosis I	0.00E+00
5	GO:0050691: regulation of defense response to virus by host	8.43E-05
6	GO:0032491: detection of molecule of fungal origin	8.43E-05
7	GO:0034628: 'de novo' NAD biosynthetic process from aspartate	8.43E-05
8	GO:0006611: protein export from nucleus	2.00E-04
9	GO:0019521: D-gluconate metabolic process	2.00E-04
10	GO:0010200: response to chitin	2.72E-04
11	GO:0051176: positive regulation of sulfur metabolic process	3.35E-04
12	GO:0000055: ribosomal large subunit export from nucleus	3.35E-04
13	GO:0046686: response to cadmium ion	3.51E-04
14	GO:0009742: brassinosteroid mediated signaling pathway	4.29E-04
15	GO:0015696: ammonium transport	4.84E-04
16	GO:0071323: cellular response to chitin	4.84E-04
17	GO:0030100: regulation of endocytosis	4.84E-04
18	GO:0009749: response to glucose	5.85E-04
19	GO:0010107: potassium ion import	6.44E-04
20	GO:0071219: cellular response to molecule of bacterial origin	6.44E-04
21	GO:1902347: response to strigolactone	6.44E-04
22	GO:0033320: UDP-D-xylose biosynthetic process	6.44E-04
23	GO:0072488: ammonium transmembrane transport	6.44E-04
24	GO:0006536: glutamate metabolic process	6.44E-04
25	GO:0006904: vesicle docking involved in exocytosis	7.98E-04
26	GO:0007029: endoplasmic reticulum organization	8.14E-04
27	GO:0009435: NAD biosynthetic process	8.14E-04
28	GO:0009164: nucleoside catabolic process	8.14E-04
29	GO:0007166: cell surface receptor signaling pathway	9.34E-04
30	GO:0010337: regulation of salicylic acid metabolic process	9.94E-04
31	GO:0006014: D-ribose metabolic process	9.94E-04
32	GO:0048232: male gamete generation	9.94E-04
33	GO:0042732: D-xylose metabolic process	9.94E-04
34	GO:0008219: cell death	1.15E-03
35	GO:0009611: response to wounding	1.17E-03
36	GO:0009423: chorismate biosynthetic process	1.18E-03
37	GO:0007205: protein kinase C-activating G-protein coupled receptor signaling pathway	1.39E-03
38	GO:0006955: immune response	1.39E-03
39	GO:1900150: regulation of defense response to fungus	1.60E-03
40	GO:0048658: anther wall tapetum development	1.60E-03
41	GO:0006887: exocytosis	1.70E-03
42	GO:0017004: cytochrome complex assembly	1.83E-03
43	GO:0000184: nuclear-transcribed mRNA catabolic process, nonsense-mediated decay	2.06E-03
44	GO:0009060: aerobic respiration	2.06E-03
45	GO:0046685: response to arsenic-containing substance	2.06E-03
46	GO:0009051: pentose-phosphate shunt, oxidative branch	2.06E-03
47	GO:0051026: chiasma assembly	2.56E-03
48	GO:0019538: protein metabolic process	2.56E-03
49	GO:0009073: aromatic amino acid family biosynthetic process	2.82E-03
50	GO:0009750: response to fructose	2.82E-03
51	GO:0010105: negative regulation of ethylene-activated signaling pathway	3.09E-03
52	GO:0042742: defense response to bacterium	3.29E-03
53	GO:0002237: response to molecule of bacterial origin	3.66E-03
54	GO:0090351: seedling development	3.95E-03
55	GO:0070588: calcium ion transmembrane transport	3.95E-03
56	GO:0009225: nucleotide-sugar metabolic process	3.95E-03
57	GO:0042753: positive regulation of circadian rhythm	4.26E-03
58	GO:0009863: salicylic acid mediated signaling pathway	4.57E-03
59	GO:0007017: microtubule-based process	4.89E-03
60	GO:0061077: chaperone-mediated protein folding	5.22E-03
61	GO:0016226: iron-sulfur cluster assembly	5.55E-03
62	GO:0007131: reciprocal meiotic recombination	5.55E-03
63	GO:0030433: ubiquitin-dependent ERAD pathway	5.55E-03
64	GO:0071215: cellular response to abscisic acid stimulus	5.89E-03
65	GO:0010118: stomatal movement	6.97E-03
66	GO:0042631: cellular response to water deprivation	6.97E-03
67	GO:0019252: starch biosynthetic process	8.10E-03
68	GO:0002229: defense response to oomycetes	8.50E-03
69	GO:0010090: trichome morphogenesis	9.30E-03
70	GO:1901657: glycosyl compound metabolic process	9.30E-03
71	GO:0006310: DNA recombination	9.72E-03
72	GO:0001666: response to hypoxia	1.10E-02
73	GO:0009615: response to virus	1.10E-02
74	GO:0009816: defense response to bacterium, incompatible interaction	1.14E-02
75	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	1.14E-02
76	GO:0080167: response to karrikin	1.16E-02
77	GO:0048573: photoperiodism, flowering	1.23E-02
78	GO:0016049: cell growth	1.28E-02
79	GO:0009817: defense response to fungus, incompatible interaction	1.33E-02
80	GO:0009813: flavonoid biosynthetic process	1.37E-02
81	GO:0006952: defense response	1.41E-02
82	GO:0009834: plant-type secondary cell wall biogenesis	1.42E-02
83	GO:0045087: innate immune response	1.57E-02
84	GO:0016051: carbohydrate biosynthetic process	1.57E-02
85	GO:0009408: response to heat	1.71E-02
86	GO:0006897: endocytosis	1.77E-02
87	GO:0009744: response to sucrose	1.88E-02
88	GO:0042546: cell wall biogenesis	1.93E-02
89	GO:0006260: DNA replication	2.15E-02
90	GO:0031347: regulation of defense response	2.15E-02
91	GO:0009873: ethylene-activated signaling pathway	2.21E-02
92	GO:0006857: oligopeptide transport	2.44E-02
93	GO:0043086: negative regulation of catalytic activity	2.62E-02
94	GO:0009626: plant-type hypersensitive response	2.74E-02
95	GO:0009620: response to fungus	2.80E-02
96	GO:0009738: abscisic acid-activated signaling pathway	2.94E-02
97	GO:0009624: response to nematode	2.98E-02
98	GO:0009555: pollen development	3.04E-02
99	GO:0035556: intracellular signal transduction	3.20E-02
100	GO:0009845: seed germination	3.70E-02
101	GO:0006457: protein folding	3.92E-02
102	GO:0006633: fatty acid biosynthetic process	4.12E-02
103	GO:0007623: circadian rhythm	4.40E-02
104	GO:0016310: phosphorylation	4.50E-02
105	GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process	4.77E-02
106	GO:0055114: oxidation-reduction process	4.83E-02
107	GO:0006470: protein dephosphorylation	4.84E-02
108	GO:0009617: response to bacterium	4.99E-02
109	GO:0010468: regulation of gene expression	4.99E-02

Rank	GO Term	Adjusted P value
1	GO:2001080: chitosan binding	0.00E+00
2	GO:0015439: heme-transporting ATPase activity	0.00E+00
3	GO:0032442: phenylcoumaran benzylic ether reductase activity	0.00E+00
4	GO:0103115: protoheme IX ABC transporter activity	0.00E+00
5	GO:0008987: quinolinate synthetase A activity	0.00E+00
6	GO:0015398: high-affinity secondary active ammonium transmembrane transporter activity	8.43E-05
7	GO:0008114: phosphogluconate 2-dehydrogenase activity	8.43E-05
8	GO:0015085: calcium ion transmembrane transporter activity	8.43E-05
9	GO:0003849: 3-deoxy-7-phosphoheptulonate synthase activity	2.00E-04
10	GO:0043023: ribosomal large subunit binding	4.84E-04
11	GO:0004351: glutamate decarboxylase activity	4.84E-04
12	GO:0004021: L-alanine:2-oxoglutarate aminotransferase activity	4.84E-04
13	GO:0019199: transmembrane receptor protein kinase activity	6.44E-04
14	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	7.27E-04
15	GO:0018685: alkane 1-monooxygenase activity	8.14E-04
16	GO:0047631: ADP-ribose diphosphatase activity	8.14E-04
17	GO:0002020: protease binding	8.14E-04
18	GO:0045431: flavonol synthase activity	8.14E-04
19	GO:0035673: oligopeptide transmembrane transporter activity	9.94E-04
20	GO:0000210: NAD+ diphosphatase activity	9.94E-04
21	GO:0008519: ammonium transmembrane transporter activity	9.94E-04
22	GO:0048040: UDP-glucuronate decarboxylase activity	9.94E-04
23	GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity	1.18E-03
24	GO:0070403: NAD+ binding	1.18E-03
25	GO:0016818: hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	1.18E-03
26	GO:0004747: ribokinase activity	1.18E-03
27	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	1.32E-03
28	GO:0008143: poly(A) binding	1.39E-03
29	GO:0004143: diacylglycerol kinase activity	1.39E-03
30	GO:0008865: fructokinase activity	1.60E-03
31	GO:0004714: transmembrane receptor protein tyrosine kinase activity	1.60E-03
32	GO:0003951: NAD+ kinase activity	1.83E-03
33	GO:0008047: enzyme activator activity	2.56E-03
34	GO:0015198: oligopeptide transporter activity	3.09E-03
35	GO:0019888: protein phosphatase regulator activity	3.37E-03
36	GO:0005388: calcium-transporting ATPase activity	3.37E-03
37	GO:0008061: chitin binding	3.95E-03
38	GO:0033612: receptor serine/threonine kinase binding	5.22E-03
39	GO:0005200: structural constituent of cytoskeleton	1.01E-02
40	GO:0050660: flavin adenine dinucleotide binding	1.08E-02
41	GO:0005524: ATP binding	1.10E-02
42	GO:0030247: polysaccharide binding	1.23E-02
43	GO:0102483: scopolin beta-glucosidase activity	1.23E-02
44	GO:0005509: calcium ion binding	1.33E-02
45	GO:0042803: protein homodimerization activity	1.45E-02
46	GO:0008422: beta-glucosidase activity	1.67E-02
47	GO:0003924: GTPase activity	1.71E-02
48	GO:0051539: 4 iron, 4 sulfur cluster binding	1.72E-02
49	GO:0009055: electron carrier activity	1.83E-02
50	GO:0003729: mRNA binding	2.43E-02
51	GO:0031625: ubiquitin protein ligase binding	2.50E-02
52	GO:0005515: protein binding	2.53E-02
53	GO:0051082: unfolded protein binding	2.98E-02
54	GO:0046872: metal ion binding	3.12E-02
55	GO:0016301: kinase activity	3.63E-02
56	GO:0030170: pyridoxal phosphate binding	3.77E-02
57	GO:0016787: hydrolase activity	3.82E-02
58	GO:0046910: pectinesterase inhibitor activity	4.19E-02
59	GO:0015297: antiporter activity	4.26E-02
60	GO:0005516: calmodulin binding	4.55E-02
61	GO:0005525: GTP binding	4.96E-02

Rank	GO Term	Adjusted P value
1	GO:0005886: plasma membrane	1.27E-05
2	GO:0008287: protein serine/threonine phosphatase complex	3.35E-04
3	GO:0000145: exocyst	6.66E-04
4	GO:0016363: nuclear matrix	1.18E-03
5	GO:0005829: cytosol	1.61E-03
6	GO:0045298: tubulin complex	2.06E-03
7	GO:0010494: cytoplasmic stress granule	2.06E-03
8	GO:0005768: endosome	2.80E-03
9	GO:0000159: protein phosphatase type 2A complex	2.82E-03
10	GO:0043234: protein complex	4.26E-03
11	GO:0000790: nuclear chromatin	6.60E-03
12	GO:0032580: Golgi cisterna membrane	9.72E-03
13	GO:0005788: endoplasmic reticulum lumen	1.14E-02
14	GO:0019005: SCF ubiquitin ligase complex	1.33E-02
15	GO:0005887: integral component of plasma membrane	2.32E-02
16	GO:0009506: plasmodesma	2.34E-02
17	GO:0005618: cell wall	2.62E-02
18	GO:0010008: endosome membrane	2.68E-02