Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT2G46830

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0015843: methylammonium transport0.00E+00
2GO:0071483: cellular response to blue light1.06E-09
3GO:0007623: circadian rhythm1.44E-09
4GO:0010100: negative regulation of photomorphogenesis3.32E-08
5GO:0009909: regulation of flower development6.92E-07
6GO:0009624: response to nematode1.21E-06
7GO:0006355: regulation of transcription, DNA-templated1.43E-06
8GO:0046467: membrane lipid biosynthetic process2.64E-05
9GO:0042754: negative regulation of circadian rhythm6.72E-05
10GO:0006898: receptor-mediated endocytosis6.72E-05
11GO:0010017: red or far-red light signaling pathway6.90E-05
12GO:0015696: ammonium transport1.76E-04
13GO:2001141: regulation of RNA biosynthetic process1.76E-04
14GO:0043433: negative regulation of sequence-specific DNA binding transcription factor activity1.76E-04
15GO:0006351: transcription, DNA-templated1.96E-04
16GO:0009658: chloroplast organization1.99E-04
17GO:0072488: ammonium transmembrane transport2.39E-04
18GO:0010600: regulation of auxin biosynthetic process2.39E-04
19GO:0009904: chloroplast accumulation movement3.07E-04
20GO:0010236: plastoquinone biosynthetic process3.07E-04
21GO:0009640: photomorphogenesis4.38E-04
22GO:0009903: chloroplast avoidance movement4.53E-04
23GO:0009648: photoperiodism4.53E-04
24GO:0070370: cellular heat acclimation5.30E-04
25GO:0048574: long-day photoperiodism, flowering6.94E-04
26GO:0034765: regulation of ion transmembrane transport7.80E-04
27GO:0009416: response to light stimulus9.02E-04
28GO:0009641: shade avoidance9.59E-04
29GO:0009970: cellular response to sulfate starvation9.59E-04
30GO:0006995: cellular response to nitrogen starvation9.59E-04
31GO:0006352: DNA-templated transcription, initiation1.05E-03
32GO:0045893: positive regulation of transcription, DNA-templated1.07E-03
33GO:0009785: blue light signaling pathway1.25E-03
34GO:0007015: actin filament organization1.35E-03
35GO:0010223: secondary shoot formation1.35E-03
36GO:0010207: photosystem II assembly1.35E-03
37GO:0008299: isoprenoid biosynthetic process1.78E-03
38GO:0042391: regulation of membrane potential2.52E-03
39GO:0042752: regulation of circadian rhythm2.78E-03
40GO:0019252: starch biosynthetic process2.91E-03
41GO:0009851: auxin biosynthetic process2.91E-03
42GO:0009567: double fertilization forming a zygote and endosperm3.47E-03
43GO:0006810: transport3.52E-03
44GO:0071805: potassium ion transmembrane transport3.62E-03
45GO:0016126: sterol biosynthetic process3.91E-03
46GO:0018298: protein-chromophore linkage4.69E-03
47GO:0008219: cell death4.69E-03
48GO:0010218: response to far red light5.02E-03
49GO:0006811: ion transport5.02E-03
50GO:0006865: amino acid transport5.35E-03
51GO:0009637: response to blue light5.52E-03
52GO:0034599: cellular response to oxidative stress5.69E-03
53GO:0042542: response to hydrogen peroxide6.39E-03
54GO:0010114: response to red light6.57E-03
55GO:0009585: red, far-red light phototransduction8.08E-03
56GO:0010224: response to UV-B8.28E-03
57GO:0042744: hydrogen peroxide catabolic process1.33E-02
58GO:0016036: cellular response to phosphate starvation1.45E-02
59GO:0045490: pectin catabolic process1.52E-02
60GO:0010228: vegetative to reproductive phase transition of meristem1.57E-02
61GO:0009739: response to gibberellin1.65E-02
62GO:0009409: response to cold1.86E-02
63GO:0009723: response to ethylene2.30E-02
64GO:0010200: response to chitin2.48E-02
65GO:0015979: photosynthesis2.66E-02
66GO:0045454: cell redox homeostasis2.75E-02
67GO:0045892: negative regulation of transcription, DNA-templated2.78E-02
68GO:0009737: response to abscisic acid2.92E-02
69GO:0009751: response to salicylic acid3.16E-02
70GO:0006281: DNA repair3.19E-02
71GO:0009753: response to jasmonic acid3.36E-02
72GO:0009734: auxin-activated signaling pathway4.07E-02
73GO:0009908: flower development4.47E-02
RankGO TermAdjusted P value
1GO:0033840: NDP-glucose-starch glucosyltransferase activity0.00E+00
2GO:0000989: transcription factor activity, transcription factor binding4.77E-08
3GO:0003700: transcription factor activity, sequence-specific DNA binding9.37E-07
4GO:0015173: aromatic amino acid transmembrane transporter activity6.72E-05
5GO:0050347: trans-octaprenyltranstransferase activity6.72E-05
6GO:0052924: all-trans-nonaprenyl-diphosphate synthase (geranylgeranyl-diphosphate specific) activity6.72E-05
7GO:0004096: catalase activity1.18E-04
8GO:0004373: glycogen (starch) synthase activity1.18E-04
9GO:0003913: DNA photolyase activity1.18E-04
10GO:0015175: neutral amino acid transmembrane transporter activity1.76E-04
11GO:0001053: plastid sigma factor activity2.39E-04
12GO:0016987: sigma factor activity2.39E-04
13GO:0004506: squalene monooxygenase activity2.39E-04
14GO:0009011: starch synthase activity2.39E-04
15GO:0008270: zinc ion binding3.15E-04
16GO:0008519: ammonium transmembrane transporter activity3.78E-04
17GO:0005242: inward rectifier potassium channel activity4.53E-04
18GO:0009881: photoreceptor activity5.30E-04
19GO:0030674: protein binding, bridging6.10E-04
20GO:0019904: protein domain specific binding1.05E-03
21GO:0042802: identical protein binding1.74E-03
22GO:0030570: pectate lyase activity2.14E-03
23GO:0005249: voltage-gated potassium channel activity2.52E-03
24GO:0030551: cyclic nucleotide binding2.52E-03
25GO:0004527: exonuclease activity2.65E-03
26GO:0010181: FMN binding2.78E-03
27GO:0003677: DNA binding2.96E-03
28GO:0016791: phosphatase activity3.47E-03
29GO:0005515: protein binding4.08E-03
30GO:0004721: phosphoprotein phosphatase activity4.37E-03
31GO:0030145: manganese ion binding5.18E-03
32GO:0050897: cobalt ion binding5.18E-03
33GO:0003899: DNA-directed 5'-3' RNA polymerase activity8.08E-03
34GO:0015171: amino acid transmembrane transporter activity8.68E-03
35GO:0005215: transporter activity1.51E-02
36GO:0050660: flavin adenine dinucleotide binding2.30E-02
37GO:0004722: protein serine/threonine phosphatase activity2.94E-02
38GO:0004519: endonuclease activity3.39E-02
39GO:0016887: ATPase activity4.36E-02
RankGO TermAdjusted P value
1GO:0009569: chloroplast starch grain6.72E-05
2GO:0031982: vesicle6.10E-04
3GO:0009514: glyoxysome6.94E-04
4GO:0005777: peroxisome1.07E-03
5GO:0010319: stromule3.62E-03
6GO:0005887: integral component of plasma membrane5.16E-03
7GO:0022626: cytosolic ribosome4.65E-02
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Gene type



Gene DE type