Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT2G46790

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0090279: regulation of calcium ion import0.00E+00
2GO:0015717: triose phosphate transport0.00E+00
3GO:0071474: cellular hyperosmotic response0.00E+00
4GO:0009644: response to high light intensity1.04E-05
5GO:0009768: photosynthesis, light harvesting in photosystem I3.65E-05
6GO:0010017: red or far-red light signaling pathway4.55E-05
7GO:0031648: protein destabilization5.10E-05
8GO:0030388: fructose 1,6-bisphosphate metabolic process5.10E-05
9GO:0051262: protein tetramerization5.10E-05
10GO:0035436: triose phosphate transmembrane transport9.05E-05
11GO:0006000: fructose metabolic process9.05E-05
12GO:0018298: protein-chromophore linkage1.85E-04
13GO:0010021: amylopectin biosynthetic process1.86E-04
14GO:0010023: proanthocyanidin biosynthetic process1.86E-04
15GO:0009765: photosynthesis, light harvesting1.86E-04
16GO:0010600: regulation of auxin biosynthetic process1.86E-04
17GO:0015713: phosphoglycerate transport1.86E-04
18GO:0015979: photosynthesis1.94E-04
19GO:0009635: response to herbicide2.97E-04
20GO:0009643: photosynthetic acclimation2.97E-04
21GO:0010244: response to low fluence blue light stimulus by blue low-fluence system3.57E-04
22GO:0009645: response to low light intensity stimulus4.19E-04
23GO:0010161: red light signaling pathway4.19E-04
24GO:0009769: photosynthesis, light harvesting in photosystem II4.19E-04
25GO:0009704: de-etiolation4.84E-04
26GO:0010928: regulation of auxin mediated signaling pathway4.84E-04
27GO:0005978: glycogen biosynthetic process4.84E-04
28GO:0006002: fructose 6-phosphate metabolic process5.50E-04
29GO:0051865: protein autoubiquitination6.19E-04
30GO:0005982: starch metabolic process6.90E-04
31GO:0009750: response to fructose8.37E-04
32GO:0005983: starch catabolic process9.12E-04
33GO:0009718: anthocyanin-containing compound biosynthetic process9.90E-04
34GO:0006094: gluconeogenesis9.90E-04
35GO:0005986: sucrose biosynthetic process9.90E-04
36GO:0009266: response to temperature stimulus1.07E-03
37GO:0006302: double-strand break repair1.07E-03
38GO:0051321: meiotic cell cycle1.50E-03
39GO:0019915: lipid storage1.50E-03
40GO:0006970: response to osmotic stress1.59E-03
41GO:2000022: regulation of jasmonic acid mediated signaling pathway1.59E-03
42GO:0009686: gibberellin biosynthetic process1.68E-03
43GO:0006814: sodium ion transport2.18E-03
44GO:0019252: starch biosynthetic process2.29E-03
45GO:0071554: cell wall organization or biogenesis2.40E-03
46GO:0009737: response to abscisic acid3.54E-03
47GO:0016311: dephosphorylation3.55E-03
48GO:0000160: phosphorelay signal transduction system3.80E-03
49GO:0010218: response to far red light3.93E-03
50GO:0010119: regulation of stomatal movement4.06E-03
51GO:0009637: response to blue light4.32E-03
52GO:0010114: response to red light5.13E-03
53GO:0006486: protein glycosylation6.31E-03
54GO:0009585: red, far-red light phototransduction6.31E-03
55GO:0009740: gibberellic acid mediated signaling pathway7.72E-03
56GO:0009624: response to nematode8.05E-03
57GO:0007623: circadian rhythm1.18E-02
58GO:0009739: response to gibberellin1.28E-02
59GO:0009409: response to cold1.29E-02
60GO:0009723: response to ethylene1.78E-02
61GO:0006355: regulation of transcription, DNA-templated2.03E-02
62GO:0045454: cell redox homeostasis2.13E-02
63GO:0045892: negative regulation of transcription, DNA-templated2.15E-02
64GO:0009751: response to salicylic acid2.45E-02
65GO:0009753: response to jasmonic acid2.60E-02
66GO:0009651: response to salt stress3.20E-02
67GO:0009908: flower development3.47E-02
68GO:0009416: response to light stimulus3.72E-02
69GO:0055085: transmembrane transport4.41E-02
RankGO TermAdjusted P value
1GO:0009899: ent-kaurene synthase activity0.00E+00
2GO:0030504: inorganic diphosphate transmembrane transporter activity0.00E+00
3GO:0005227: calcium activated cation channel activity1.97E-05
4GO:0031409: pigment binding2.85E-05
5GO:0003844: 1,4-alpha-glucan branching enzyme activity5.10E-05
6GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity5.10E-05
7GO:0071917: triose-phosphate transmembrane transporter activity9.05E-05
8GO:0043169: cation binding9.05E-05
9GO:0016168: chlorophyll binding1.48E-04
10GO:0015120: phosphoglycerate transmembrane transporter activity1.86E-04
11GO:0005261: cation channel activity3.57E-04
12GO:0008378: galactosyltransferase activity9.12E-04
13GO:0005315: inorganic phosphate transmembrane transporter activity9.90E-04
14GO:0004565: beta-galactosidase activity9.90E-04
15GO:0008408: 3'-5' exonuclease activity1.50E-03
16GO:0008514: organic anion transmembrane transporter activity1.78E-03
17GO:0000156: phosphorelay response regulator activity2.61E-03
18GO:0016413: O-acetyltransferase activity2.95E-03
19GO:0030145: manganese ion binding4.06E-03
20GO:0043621: protein self-association5.42E-03
21GO:0015293: symporter activity5.56E-03
22GO:0005198: structural molecule activity5.56E-03
23GO:0015035: protein disulfide oxidoreductase activity8.22E-03
24GO:0015144: carbohydrate transmembrane transporter activity1.07E-02
25GO:0015297: antiporter activity1.14E-02
26GO:0005351: sugar:proton symporter activity1.16E-02
27GO:0000287: magnesium ion binding1.59E-02
28GO:0004722: protein serine/threonine phosphatase activity2.28E-02
29GO:0009055: electron carrier activity2.60E-02
30GO:0004519: endonuclease activity2.63E-02
31GO:0003700: transcription factor activity, sequence-specific DNA binding2.66E-02
32GO:0005515: protein binding3.42E-02
33GO:0003677: DNA binding3.45E-02
34GO:0046872: metal ion binding4.22E-02
35GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds4.54E-02
RankGO TermAdjusted P value
1GO:0009534: chloroplast thylakoid3.81E-06
2GO:0000791: euchromatin1.97E-05
3GO:0030076: light-harvesting complex2.49E-05
4GO:0010287: plastoglobule3.50E-05
5GO:0030870: Mre11 complex5.10E-05
6GO:0009579: thylakoid7.01E-05
7GO:0009522: photosystem I7.90E-05
8GO:0009523: photosystem II8.58E-05
9GO:0000795: synaptonemal complex2.40E-04
10GO:0009501: amyloplast4.84E-04
11GO:0042651: thylakoid membrane1.41E-03
12GO:0009941: chloroplast envelope1.94E-03
13GO:0000785: chromatin2.50E-03
14GO:0009535: chloroplast thylakoid membrane3.78E-03
15GO:0009507: chloroplast4.08E-03
16GO:0031969: chloroplast membrane1.87E-02
17GO:0016021: integral component of membrane2.64E-02
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Gene type



Gene DE type