co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT2G46520

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0010046: response to mycotoxin	0.00E+00
2	GO:0009560: embryo sac egg cell differentiation	0.00E+00
3	GO:0010245: radial microtubular system formation	0.00E+00
4	GO:0034263: positive regulation of autophagy in response to ER overload	0.00E+00
5	GO:0042353: fucose biosynthetic process	0.00E+00
6	GO:0019481: L-alanine catabolic process, by transamination	0.00E+00
7	GO:0006562: proline catabolic process	4.60E-05
8	GO:0015853: adenine transport	4.60E-05
9	GO:0015854: guanine transport	4.60E-05
10	GO:0009833: plant-type primary cell wall biogenesis	9.77E-05
11	GO:0043255: regulation of carbohydrate biosynthetic process	1.13E-04
12	GO:0010155: regulation of proton transport	1.13E-04
13	GO:0010133: proline catabolic process to glutamate	1.13E-04
14	GO:0010372: positive regulation of gibberellin biosynthetic process	1.13E-04
15	GO:2000030: regulation of response to red or far red light	1.13E-04
16	GO:0006081: cellular aldehyde metabolic process	1.95E-04
17	GO:0000394: RNA splicing, via endonucleolytic cleavage and ligation	1.95E-04
18	GO:0034427: nuclear-transcribed mRNA catabolic process, exonucleolytic, 3'-5'	1.95E-04
19	GO:0006537: glutamate biosynthetic process	2.85E-04
20	GO:0009558: embryo sac cellularization	2.85E-04
21	GO:0006986: response to unfolded protein	2.85E-04
22	GO:0009399: nitrogen fixation	2.85E-04
23	GO:0001709: cell fate determination	3.84E-04
24	GO:0009694: jasmonic acid metabolic process	3.84E-04
25	GO:0015743: malate transport	3.84E-04
26	GO:0010483: pollen tube reception	3.84E-04
27	GO:0007112: male meiosis cytokinesis	3.84E-04
28	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	4.38E-04
29	GO:0009816: defense response to bacterium, incompatible interaction	4.38E-04
30	GO:0030041: actin filament polymerization	4.88E-04
31	GO:0030308: negative regulation of cell growth	4.88E-04
32	GO:0030244: cellulose biosynthetic process	5.38E-04
33	GO:0010256: endomembrane system organization	5.98E-04
34	GO:0048317: seed morphogenesis	5.98E-04
35	GO:0010119: regulation of stomatal movement	6.19E-04
36	GO:0009861: jasmonic acid and ethylene-dependent systemic resistance	7.13E-04
37	GO:0046777: protein autophosphorylation	7.18E-04
38	GO:0007205: protein kinase C-activating G-protein coupled receptor signaling pathway	8.33E-04
39	GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway	8.33E-04
40	GO:0006401: RNA catabolic process	8.33E-04
41	GO:0006402: mRNA catabolic process	9.57E-04
42	GO:0045010: actin nucleation	9.57E-04
43	GO:0009787: regulation of abscisic acid-activated signaling pathway	9.57E-04
44	GO:0009408: response to heat	1.07E-03
45	GO:0006997: nucleus organization	1.09E-03
46	GO:0030968: endoplasmic reticulum unfolded protein response	1.09E-03
47	GO:0010208: pollen wall assembly	1.09E-03
48	GO:0060321: acceptance of pollen	1.09E-03
49	GO:0007338: single fertilization	1.22E-03
50	GO:0046685: response to arsenic-containing substance	1.22E-03
51	GO:0048829: root cap development	1.51E-03
52	GO:0048229: gametophyte development	1.66E-03
53	GO:0009742: brassinosteroid mediated signaling pathway	1.70E-03
54	GO:0010105: negative regulation of ethylene-activated signaling pathway	1.81E-03
55	GO:0071365: cellular response to auxin stimulus	1.81E-03
56	GO:0006820: anion transport	1.81E-03
57	GO:0034605: cellular response to heat	2.14E-03
58	GO:0009969: xyloglucan biosynthetic process	2.31E-03
59	GO:0006863: purine nucleobase transport	2.49E-03
60	GO:2000377: regulation of reactive oxygen species metabolic process	2.67E-03
61	GO:0009863: salicylic acid mediated signaling pathway	2.67E-03
62	GO:0043622: cortical microtubule organization	2.85E-03
63	GO:0061077: chaperone-mediated protein folding	3.04E-03
64	GO:0009737: response to abscisic acid	3.05E-03
65	GO:0009814: defense response, incompatible interaction	3.23E-03
66	GO:0031348: negative regulation of defense response	3.23E-03
67	GO:0009686: gibberellin biosynthetic process	3.43E-03
68	GO:0009306: protein secretion	3.63E-03
69	GO:0009741: response to brassinosteroid	4.25E-03
70	GO:0009960: endosperm development	4.25E-03
71	GO:0045489: pectin biosynthetic process	4.25E-03
72	GO:0007018: microtubule-based movement	4.47E-03
73	GO:0006814: sodium ion transport	4.47E-03
74	GO:0009791: post-embryonic development	4.68E-03
75	GO:0009723: response to ethylene	4.86E-03
76	GO:0010193: response to ozone	4.91E-03
77	GO:0010583: response to cyclopentenone	5.13E-03
78	GO:0031047: gene silencing by RNA	5.13E-03
79	GO:0006914: autophagy	5.60E-03
80	GO:0007267: cell-cell signaling	5.84E-03
81	GO:0000910: cytokinesis	6.08E-03
82	GO:0006468: protein phosphorylation	6.14E-03
83	GO:0001666: response to hypoxia	6.32E-03
84	GO:0009627: systemic acquired resistance	6.82E-03
85	GO:0016049: cell growth	7.34E-03
86	GO:0009817: defense response to fungus, incompatible interaction	7.60E-03
87	GO:0009832: plant-type cell wall biogenesis	7.87E-03
88	GO:0010311: lateral root formation	7.87E-03
89	GO:0006397: mRNA processing	8.02E-03
90	GO:0048364: root development	8.02E-03
91	GO:0006499: N-terminal protein myristoylation	8.14E-03
92	GO:0009834: plant-type secondary cell wall biogenesis	8.14E-03
93	GO:0016051: carbohydrate biosynthetic process	8.96E-03
94	GO:0046686: response to cadmium ion	9.34E-03
95	GO:0009873: ethylene-activated signaling pathway	9.92E-03
96	GO:0009640: photomorphogenesis	1.07E-02
97	GO:0006812: cation transport	1.26E-02
98	GO:0009846: pollen germination	1.26E-02
99	GO:0009738: abscisic acid-activated signaling pathway	1.32E-02
100	GO:0009809: lignin biosynthetic process	1.32E-02
101	GO:0006364: rRNA processing	1.32E-02
102	GO:0009585: red, far-red light phototransduction	1.32E-02
103	GO:0006813: potassium ion transport	1.32E-02
104	GO:0010224: response to UV-B	1.35E-02
105	GO:0009611: response to wounding	1.40E-02
106	GO:0009626: plant-type hypersensitive response	1.56E-02
107	GO:0009553: embryo sac development	1.66E-02
108	GO:0009624: response to nematode	1.70E-02
109	GO:0006457: protein folding	1.77E-02
110	GO:0000398: mRNA splicing, via spliceosome	1.88E-02
111	GO:0009845: seed germination	2.10E-02
112	GO:0016567: protein ubiquitination	2.18E-02
113	GO:0009414: response to water deprivation	2.71E-02
114	GO:0006470: protein dephosphorylation	2.75E-02
115	GO:0007166: cell surface receptor signaling pathway	2.75E-02
116	GO:0071555: cell wall organization	2.77E-02
117	GO:0008380: RNA splicing	2.84E-02
118	GO:0009617: response to bacterium	2.84E-02
119	GO:0009826: unidimensional cell growth	3.32E-02
120	GO:0006970: response to osmotic stress	3.60E-02
121	GO:0009860: pollen tube growth	3.60E-02
122	GO:0009409: response to cold	3.75E-02
123	GO:0048366: leaf development	3.84E-02
124	GO:0016192: vesicle-mediated transport	4.13E-02

Rank	GO Term	Adjusted P value
1	GO:0033721: aldehyde dehydrogenase (NADP+) activity	0.00E+00
2	GO:0030621: U4 snRNA binding	0.00E+00
3	GO:0080123: jasmonate-amino synthetase activity	0.00E+00
4	GO:0070566: adenylyltransferase activity	0.00E+00
5	GO:0004657: proline dehydrogenase activity	4.60E-05
6	GO:0004591: oxoglutarate dehydrogenase (succinyl-transferring) activity	4.60E-05
7	GO:0030544: Hsp70 protein binding	4.60E-05
8	GO:0005524: ATP binding	8.59E-05
9	GO:0004540: ribonuclease activity	1.36E-04
10	GO:0016760: cellulose synthase (UDP-forming) activity	1.65E-04
11	GO:0004030: aldehyde dehydrogenase [NAD(P)+] activity	1.95E-04
12	GO:0004021: L-alanine:2-oxoglutarate aminotransferase activity	2.85E-04
13	GO:0005432: calcium:sodium antiporter activity	2.85E-04
14	GO:0016759: cellulose synthase activity	3.49E-04
15	GO:0005253: anion channel activity	3.84E-04
16	GO:0043015: gamma-tubulin binding	3.84E-04
17	GO:0004356: glutamate-ammonia ligase activity	4.88E-04
18	GO:0017070: U6 snRNA binding	4.88E-04
19	GO:0008381: mechanically-gated ion channel activity	4.88E-04
20	GO:0004029: aldehyde dehydrogenase (NAD) activity	5.98E-04
21	GO:0004674: protein serine/threonine kinase activity	6.91E-04
22	GO:0004723: calcium-dependent protein serine/threonine phosphatase activity	7.13E-04
23	GO:0019899: enzyme binding	8.33E-04
24	GO:0004143: diacylglycerol kinase activity	8.33E-04
25	GO:0015140: malate transmembrane transporter activity	8.33E-04
26	GO:0015491: cation:cation antiporter activity	9.57E-04
27	GO:0003951: NAD+ kinase activity	1.09E-03
28	GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity	1.36E-03
29	GO:0003779: actin binding	1.56E-03
30	GO:0051082: unfolded protein binding	1.60E-03
31	GO:0004672: protein kinase activity	1.73E-03
32	GO:0003729: mRNA binding	1.77E-03
33	GO:0004521: endoribonuclease activity	1.81E-03
34	GO:0000175: 3'-5'-exoribonuclease activity	1.98E-03
35	GO:0016301: kinase activity	2.42E-03
36	GO:0005345: purine nucleobase transmembrane transporter activity	2.85E-03
37	GO:0008017: microtubule binding	2.86E-03
38	GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity	3.23E-03
39	GO:0019901: protein kinase binding	4.68E-03
40	GO:0004518: nuclease activity	5.13E-03
41	GO:0016757: transferase activity, transferring glycosyl groups	6.20E-03
42	GO:0004721: phosphoprotein phosphatase activity	7.08E-03
43	GO:0004842: ubiquitin-protein transferase activity	8.02E-03
44	GO:0050897: cobalt ion binding	8.41E-03
45	GO:0043621: protein self-association	1.13E-02
46	GO:0016887: ATPase activity	1.19E-02
47	GO:0000166: nucleotide binding	1.37E-02
48	GO:0003777: microtubule motor activity	1.42E-02
49	GO:0031625: ubiquitin protein ligase binding	1.42E-02
50	GO:0022857: transmembrane transporter activity	1.63E-02
51	GO:0008270: zinc ion binding	1.70E-02
52	GO:0008026: ATP-dependent helicase activity	1.77E-02
53	GO:0030246: carbohydrate binding	1.84E-02
54	GO:0016758: transferase activity, transferring hexosyl groups	1.95E-02
55	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	2.38E-02
56	GO:0015297: antiporter activity	2.42E-02
57	GO:0005509: calcium ion binding	2.56E-02
58	GO:0042626: ATPase activity, coupled to transmembrane movement of substances	2.97E-02
59	GO:0003824: catalytic activity	3.04E-02
60	GO:0005215: transporter activity	3.07E-02
61	GO:0004722: protein serine/threonine phosphatase activity	4.83E-02

Rank	GO Term	Adjusted P value
1	GO:0043680: filiform apparatus	0.00E+00
2	GO:0005886: plasma membrane	1.41E-06
3	GO:0016442: RISC complex	4.60E-05
4	GO:0005802: trans-Golgi network	9.72E-05
5	GO:0005768: endosome	1.27E-04
6	GO:0010330: cellulose synthase complex	1.95E-04
7	GO:0008287: protein serine/threonine phosphatase complex	1.95E-04
8	GO:0009506: plasmodesma	4.10E-04
9	GO:0000932: P-body	4.15E-04
10	GO:0000178: exosome (RNase complex)	4.88E-04
11	GO:0030173: integral component of Golgi membrane	7.13E-04
12	GO:0010005: cortical microtubule, transverse to long axis	7.13E-04
13	GO:0046540: U4/U6 x U5 tri-snRNP complex	1.09E-03
14	GO:0010494: cytoplasmic stress granule	1.22E-03
15	GO:0005635: nuclear envelope	1.22E-03
16	GO:0010008: endosome membrane	1.38E-03
17	GO:0048471: perinuclear region of cytoplasm	1.66E-03
18	GO:0005737: cytoplasm	1.67E-03
19	GO:0019013: viral nucleocapsid	1.98E-03
20	GO:0009524: phragmoplast	2.10E-03
21	GO:0016021: integral component of membrane	2.47E-03
22	GO:0005794: Golgi apparatus	2.79E-03
23	GO:0005871: kinesin complex	3.83E-03
24	GO:0080008: Cul4-RING E3 ubiquitin ligase complex	4.61E-03
25	GO:0000145: exocyst	5.13E-03
26	GO:0005783: endoplasmic reticulum	5.14E-03
27	GO:0032580: Golgi cisterna membrane	5.60E-03
28	GO:0019005: SCF ubiquitin ligase complex	7.60E-03
29	GO:0005681: spliceosomal complex	1.49E-02
30	GO:0016607: nuclear speck	1.52E-02
31	GO:0009705: plant-type vacuole membrane	2.50E-02
32	GO:0016020: membrane	2.83E-02
33	GO:0000139: Golgi membrane	3.75E-02
34	GO:0005874: microtubule	3.88E-02
35	GO:0005789: endoplasmic reticulum membrane	4.22E-02