Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT2G46420

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0006069: ethanol oxidation0.00E+00
2GO:0006721: terpenoid metabolic process0.00E+00
3GO:0009236: cobalamin biosynthetic process0.00E+00
4GO:0042908: xenobiotic transport0.00E+00
5GO:0009439: cyanate metabolic process0.00E+00
6GO:0006592: ornithine biosynthetic process0.00E+00
7GO:0018293: protein-FAD linkage0.00E+00
8GO:0032211: negative regulation of telomere maintenance via telomerase0.00E+00
9GO:0034553: mitochondrial respiratory chain complex II assembly0.00E+00
10GO:0009440: cyanate catabolic process0.00E+00
11GO:0046292: formaldehyde metabolic process0.00E+00
12GO:0046294: formaldehyde catabolic process0.00E+00
13GO:0006099: tricarboxylic acid cycle6.40E-06
14GO:0006006: glucose metabolic process3.71E-05
15GO:0055114: oxidation-reduction process7.25E-05
16GO:0009853: photorespiration9.37E-05
17GO:1902418: (+)-abscisic acid D-glucopyranosyl ester transmembrane transport2.53E-04
18GO:0010265: SCF complex assembly2.53E-04
19GO:0019354: siroheme biosynthetic process2.53E-04
20GO:0016487: farnesol metabolic process2.53E-04
21GO:0031539: positive regulation of anthocyanin metabolic process2.53E-04
22GO:0006007: glucose catabolic process2.53E-04
23GO:0031468: nuclear envelope reassembly2.53E-04
24GO:0046685: response to arsenic-containing substance3.51E-04
25GO:0009615: response to virus4.57E-04
26GO:0006508: proteolysis4.67E-04
27GO:0006432: phenylalanyl-tRNA aminoacylation5.59E-04
28GO:0019441: tryptophan catabolic process to kynurenine5.59E-04
29GO:0009308: amine metabolic process5.59E-04
30GO:0097054: L-glutamate biosynthetic process5.59E-04
31GO:0080183: response to photooxidative stress5.59E-04
32GO:0019222: regulation of metabolic process5.59E-04
33GO:0043255: regulation of carbohydrate biosynthetic process5.59E-04
34GO:0019388: galactose catabolic process5.59E-04
35GO:0045454: cell redox homeostasis7.79E-04
36GO:1901562: response to paraquat9.07E-04
37GO:0015940: pantothenate biosynthetic process9.07E-04
38GO:0045793: positive regulation of cell size9.07E-04
39GO:0009432: SOS response9.07E-04
40GO:0016042: lipid catabolic process1.07E-03
41GO:0009751: response to salicylic acid1.09E-03
42GO:1901332: negative regulation of lateral root development1.29E-03
43GO:0006164: purine nucleotide biosynthetic process1.29E-03
44GO:0009963: positive regulation of flavonoid biosynthetic process1.29E-03
45GO:0015700: arsenite transport1.29E-03
46GO:0009590: detection of gravity1.29E-03
47GO:0032877: positive regulation of DNA endoreduplication1.29E-03
48GO:0006624: vacuolar protein processing1.29E-03
49GO:1902358: sulfate transmembrane transport1.29E-03
50GO:0000730: DNA recombinase assembly1.29E-03
51GO:0006107: oxaloacetate metabolic process1.29E-03
52GO:0006537: glutamate biosynthetic process1.29E-03
53GO:0009113: purine nucleobase biosynthetic process1.29E-03
54GO:0006809: nitric oxide biosynthetic process1.29E-03
55GO:0006749: glutathione metabolic process1.73E-03
56GO:0044205: 'de novo' UMP biosynthetic process1.73E-03
57GO:0032366: intracellular sterol transport1.73E-03
58GO:0019676: ammonia assimilation cycle1.73E-03
59GO:0051781: positive regulation of cell division1.73E-03
60GO:0051365: cellular response to potassium ion starvation1.73E-03
61GO:0006221: pyrimidine nucleotide biosynthetic process1.73E-03
62GO:0051603: proteolysis involved in cellular protein catabolic process1.80E-03
63GO:0009826: unidimensional cell growth1.83E-03
64GO:0080022: primary root development2.05E-03
65GO:0015991: ATP hydrolysis coupled proton transport2.05E-03
66GO:0005513: detection of calcium ion2.21E-03
67GO:0015986: ATP synthesis coupled proton transport2.37E-03
68GO:0046686: response to cadmium ion2.43E-03
69GO:0080167: response to karrikin2.69E-03
70GO:0009117: nucleotide metabolic process2.72E-03
71GO:0035435: phosphate ion transmembrane transport2.72E-03
72GO:0006121: mitochondrial electron transport, succinate to ubiquinone2.72E-03
73GO:0006751: glutathione catabolic process2.72E-03
74GO:0006796: phosphate-containing compound metabolic process2.72E-03
75GO:0003006: developmental process involved in reproduction2.72E-03
76GO:0044550: secondary metabolite biosynthetic process3.05E-03
77GO:0006207: 'de novo' pyrimidine nucleobase biosynthetic process3.86E-03
78GO:0050790: regulation of catalytic activity3.86E-03
79GO:0080027: response to herbivore3.86E-03
80GO:0042148: strand invasion3.86E-03
81GO:0006122: mitochondrial electron transport, ubiquinol to cytochrome c3.86E-03
82GO:0006974: cellular response to DNA damage stimulus4.38E-03
83GO:0009850: auxin metabolic process4.48E-03
84GO:0048658: anther wall tapetum development4.48E-03
85GO:0006102: isocitrate metabolic process4.48E-03
86GO:0010439: regulation of glucosinolate biosynthetic process4.48E-03
87GO:0005978: glycogen biosynthetic process4.48E-03
88GO:0009787: regulation of abscisic acid-activated signaling pathway4.48E-03
89GO:0006526: arginine biosynthetic process5.13E-03
90GO:0010099: regulation of photomorphogenesis5.13E-03
91GO:0015996: chlorophyll catabolic process5.13E-03
92GO:0010212: response to ionizing radiation5.13E-03
93GO:0006189: 'de novo' IMP biosynthetic process5.81E-03
94GO:0009821: alkaloid biosynthetic process5.81E-03
95GO:0080144: amino acid homeostasis5.81E-03
96GO:0043069: negative regulation of programmed cell death7.26E-03
97GO:0006995: cellular response to nitrogen starvation7.26E-03
98GO:0048229: gametophyte development8.04E-03
99GO:0006378: mRNA polyadenylation8.04E-03
100GO:0052544: defense response by callose deposition in cell wall8.04E-03
101GO:0072593: reactive oxygen species metabolic process8.04E-03
102GO:0009926: auxin polar transport8.35E-03
103GO:0006312: mitotic recombination8.83E-03
104GO:0002213: defense response to insect8.83E-03
105GO:0006108: malate metabolic process9.66E-03
106GO:0006807: nitrogen compound metabolic process9.66E-03
107GO:0050826: response to freezing9.66E-03
108GO:0006855: drug transmembrane transport9.76E-03
109GO:0009723: response to ethylene1.13E-02
110GO:0009809: lignin biosynthetic process1.13E-02
111GO:0010039: response to iron ion1.14E-02
112GO:0007030: Golgi organization1.14E-02
113GO:0019853: L-ascorbic acid biosynthetic process1.14E-02
114GO:0010224: response to UV-B1.17E-02
115GO:0006071: glycerol metabolic process1.23E-02
116GO:0042753: positive regulation of circadian rhythm1.23E-02
117GO:0006487: protein N-linked glycosylation1.32E-02
118GO:0006096: glycolytic process1.34E-02
119GO:0048316: seed development1.38E-02
120GO:0019953: sexual reproduction1.42E-02
121GO:0009620: response to fungus1.47E-02
122GO:0015992: proton transport1.52E-02
123GO:0010431: seed maturation1.52E-02
124GO:0019915: lipid storage1.52E-02
125GO:0019748: secondary metabolic process1.62E-02
126GO:0010017: red or far-red light signaling pathway1.62E-02
127GO:0016226: iron-sulfur cluster assembly1.62E-02
128GO:0006012: galactose metabolic process1.72E-02
129GO:0019722: calcium-mediated signaling1.83E-02
130GO:0006281: DNA repair2.03E-02
131GO:0042391: regulation of membrane potential2.05E-02
132GO:0034220: ion transmembrane transport2.05E-02
133GO:0010051: xylem and phloem pattern formation2.05E-02
134GO:0010118: stomatal movement2.05E-02
135GO:0042631: cellular response to water deprivation2.05E-02
136GO:0009058: biosynthetic process2.13E-02
137GO:0006662: glycerol ether metabolic process2.16E-02
138GO:0009958: positive gravitropism2.16E-02
139GO:0006520: cellular amino acid metabolic process2.16E-02
140GO:0009753: response to jasmonic acid2.22E-02
141GO:0061025: membrane fusion2.27E-02
142GO:0019252: starch biosynthetic process2.39E-02
143GO:0055072: iron ion homeostasis2.39E-02
144GO:0048510: regulation of timing of transition from vegetative to reproductive phase2.51E-02
145GO:0019761: glucosinolate biosynthetic process2.63E-02
146GO:0010090: trichome morphogenesis2.75E-02
147GO:0010150: leaf senescence2.79E-02
148GO:0009828: plant-type cell wall loosening2.87E-02
149GO:0006310: DNA recombination2.87E-02
150GO:0010228: vegetative to reproductive phase transition of meristem2.92E-02
151GO:0010286: heat acclimation3.00E-02
152GO:0000910: cytokinesis3.13E-02
153GO:0009788: negative regulation of abscisic acid-activated signaling pathway3.39E-02
154GO:0009627: systemic acquired resistance3.52E-02
155GO:0009735: response to cytokinin3.71E-02
156GO:0009733: response to auxin3.92E-02
157GO:0008219: cell death3.93E-02
158GO:0009817: defense response to fungus, incompatible interaction3.93E-02
159GO:0010311: lateral root formation4.08E-02
160GO:0006811: ion transport4.22E-02
161GO:0010218: response to far red light4.22E-02
162GO:0009407: toxin catabolic process4.22E-02
163GO:0009631: cold acclimation4.36E-02
164GO:0010043: response to zinc ion4.36E-02
165GO:0007568: aging4.36E-02
166GO:0045087: innate immune response4.66E-02
167GO:0034599: cellular response to oxidative stress4.80E-02
RankGO TermAdjusted P value
1GO:0004151: dihydroorotase activity0.00E+00
2GO:0047886: farnesol dehydrogenase activity0.00E+00
3GO:0010471: GDP-galactose:mannose-1-phosphate guanylyltransferase activity0.00E+00
4GO:0008777: acetylornithine deacetylase activity0.00E+00
5GO:0016852: sirohydrochlorin cobaltochelatase activity0.00E+00
6GO:0008928: mannose-1-phosphate guanylyltransferase (GDP) activity0.00E+00
7GO:0080007: S-nitrosoglutathione reductase activity0.00E+00
8GO:0017168: 5-oxoprolinase (ATP-hydrolyzing) activity0.00E+00
9GO:0010474: glucose-1-phosphate guanylyltransferase (GDP) activity0.00E+00
10GO:0010473: GDP-galactose:myoinositol-1-phosphate guanylyltransferase activity0.00E+00
11GO:0008824: cyanate hydratase activity0.00E+00
12GO:0015930: glutamate synthase activity0.00E+00
13GO:0050152: omega-amidase activity0.00E+00
14GO:0004637: phosphoribosylamine-glycine ligase activity0.00E+00
15GO:0018738: S-formylglutathione hydrolase activity0.00E+00
16GO:0051266: sirohydrochlorin ferrochelatase activity0.00E+00
17GO:0010472: GDP-galactose:glucose-1-phosphate guanylyltransferase activity0.00E+00
18GO:0051903: S-(hydroxymethyl)glutathione dehydrogenase activity0.00E+00
19GO:0016788: hydrolase activity, acting on ester bonds5.98E-05
20GO:0046933: proton-transporting ATP synthase activity, rotational mechanism2.10E-04
21GO:0052594: aminoacetone:oxygen oxidoreductase(deaminating) activity2.53E-04
22GO:0030611: arsenate reductase activity2.53E-04
23GO:0016041: glutamate synthase (ferredoxin) activity2.53E-04
24GO:1902417: (+)-abscisic acid D-glucopyranosyl ester transmembrane transporter activity2.53E-04
25GO:0080048: GDP-D-glucose phosphorylase activity2.53E-04
26GO:0010179: IAA-Ala conjugate hydrolase activity2.53E-04
27GO:0003864: 3-methyl-2-oxobutanoate hydroxymethyltransferase activity2.53E-04
28GO:0010475: galactose-1-phosphate guanylyltransferase (GDP) activity2.53E-04
29GO:0080047: GDP-L-galactose phosphorylase activity2.53E-04
30GO:0052596: phenethylamine:oxygen oxidoreductase (deaminating) activity2.53E-04
31GO:0052593: tryptamine:oxygen oxidoreductase (deaminating) activity2.53E-04
32GO:0004591: oxoglutarate dehydrogenase (succinyl-transferring) activity2.53E-04
33GO:0052595: aliphatic-amine oxidase activity2.53E-04
34GO:0015446: ATPase-coupled arsenite transmembrane transporter activity2.53E-04
35GO:0071992: phytochelatin transmembrane transporter activity2.53E-04
36GO:0016787: hydrolase activity5.33E-04
37GO:0004450: isocitrate dehydrogenase (NADP+) activity5.59E-04
38GO:0051980: iron-nicotianamine transmembrane transporter activity5.59E-04
39GO:0047364: desulfoglucosinolate sulfotransferase activity5.59E-04
40GO:0046537: 2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity5.59E-04
41GO:0004061: arylformamidase activity5.59E-04
42GO:0004614: phosphoglucomutase activity5.59E-04
43GO:0004826: phenylalanine-tRNA ligase activity5.59E-04
44GO:0008794: arsenate reductase (glutaredoxin) activity5.62E-04
45GO:0004129: cytochrome-c oxidase activity5.62E-04
46GO:0052689: carboxylic ester hydrolase activity6.76E-04
47GO:0004022: alcohol dehydrogenase (NAD) activity7.28E-04
48GO:0004089: carbonate dehydratase activity7.28E-04
49GO:0050897: cobalt ion binding7.70E-04
50GO:0004557: alpha-galactosidase activity9.07E-04
51GO:0016805: dipeptidase activity9.07E-04
52GO:0052692: raffinose alpha-galactosidase activity9.07E-04
53GO:0051539: 4 iron, 4 sulfur cluster binding1.01E-03
54GO:0051536: iron-sulfur cluster binding1.12E-03
55GO:0004185: serine-type carboxypeptidase activity1.18E-03
56GO:0010178: IAA-amino acid conjugate hydrolase activity1.29E-03
57GO:0004365: glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity1.29E-03
58GO:0035529: NADH pyrophosphatase activity1.29E-03
59GO:0004576: oligosaccharyl transferase activity1.73E-03
60GO:0010011: auxin binding1.73E-03
61GO:0016810: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds1.73E-03
62GO:0016820: hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances1.73E-03
63GO:0004579: dolichyl-diphosphooligosaccharide-protein glycotransferase activity2.21E-03
64GO:0004040: amidase activity2.21E-03
65GO:0051538: 3 iron, 4 sulfur cluster binding2.21E-03
66GO:0008177: succinate dehydrogenase (ubiquinone) activity2.21E-03
67GO:0080130: L-phenylalanine:2-oxoglutarate aminotransferase activity2.72E-03
68GO:0030976: thiamine pyrophosphate binding2.72E-03
69GO:0080046: quercetin 4'-O-glucosyltransferase activity2.72E-03
70GO:0008137: NADH dehydrogenase (ubiquinone) activity2.72E-03
71GO:0051117: ATPase binding2.72E-03
72GO:0004069: L-aspartate:2-oxoglutarate aminotransferase activity2.72E-03
73GO:0015035: protein disulfide oxidoreductase activity2.80E-03
74GO:0004197: cysteine-type endopeptidase activity2.90E-03
75GO:0004602: glutathione peroxidase activity3.27E-03
76GO:0005261: cation channel activity3.27E-03
77GO:0051920: peroxiredoxin activity3.27E-03
78GO:0008237: metallopeptidase activity3.49E-03
79GO:0000150: recombinase activity3.86E-03
80GO:0005085: guanyl-nucleotide exchange factor activity3.86E-03
81GO:0008235: metalloexopeptidase activity3.86E-03
82GO:0042162: telomeric DNA binding3.86E-03
83GO:0004427: inorganic diphosphatase activity3.86E-03
84GO:0008121: ubiquinol-cytochrome-c reductase activity3.86E-03
85GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen3.98E-03
86GO:0004869: cysteine-type endopeptidase inhibitor activity4.48E-03
87GO:0004520: endodeoxyribonuclease activity4.48E-03
88GO:0016209: antioxidant activity4.48E-03
89GO:0000400: four-way junction DNA binding4.48E-03
90GO:0004034: aldose 1-epimerase activity4.48E-03
91GO:0052747: sinapyl alcohol dehydrogenase activity4.48E-03
92GO:0030247: polysaccharide binding4.61E-03
93GO:0008236: serine-type peptidase activity4.86E-03
94GO:0008271: secondary active sulfate transmembrane transporter activity5.13E-03
95GO:0005507: copper ion binding5.70E-03
96GO:0008553: hydrogen-exporting ATPase activity, phosphorylative mechanism5.81E-03
97GO:0009815: 1-aminocyclopropane-1-carboxylate oxidase activity5.81E-03
98GO:0008889: glycerophosphodiester phosphodiesterase activity5.81E-03
99GO:0030145: manganese ion binding5.91E-03
100GO:0003697: single-stranded DNA binding6.48E-03
101GO:0016844: strictosidine synthase activity6.52E-03
102GO:0045309: protein phosphorylated amino acid binding6.52E-03
103GO:0046872: metal ion binding7.66E-03
104GO:0004177: aminopeptidase activity8.04E-03
105GO:0008559: xenobiotic-transporting ATPase activity8.04E-03
106GO:0019904: protein domain specific binding8.04E-03
107GO:0046961: proton-transporting ATPase activity, rotational mechanism8.04E-03
108GO:0000049: tRNA binding8.83E-03
109GO:0045551: cinnamyl-alcohol dehydrogenase activity8.83E-03
110GO:0015198: oligopeptide transporter activity8.83E-03
111GO:0015116: sulfate transmembrane transporter activity8.83E-03
112GO:0000287: magnesium ion binding9.19E-03
113GO:0005315: inorganic phosphate transmembrane transporter activity9.66E-03
114GO:0051287: NAD binding1.01E-02
115GO:0005506: iron ion binding1.02E-02
116GO:0008131: primary amine oxidase activity1.05E-02
117GO:0008266: poly(U) RNA binding1.05E-02
118GO:0004175: endopeptidase activity1.05E-02
119GO:0030552: cAMP binding1.14E-02
120GO:0030553: cGMP binding1.14E-02
121GO:0008061: chitin binding1.14E-02
122GO:0003712: transcription cofactor activity1.14E-02
123GO:0008146: sulfotransferase activity1.14E-02
124GO:0003690: double-stranded DNA binding1.17E-02
125GO:0016298: lipase activity1.17E-02
126GO:0004725: protein tyrosine phosphatase activity1.23E-02
127GO:0008234: cysteine-type peptidase activity1.25E-02
128GO:0043130: ubiquitin binding1.32E-02
129GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups1.38E-02
130GO:0005216: ion channel activity1.42E-02
131GO:0008094: DNA-dependent ATPase activity1.52E-02
132GO:0004540: ribonuclease activity1.52E-02
133GO:0047134: protein-disulfide reductase activity1.94E-02
134GO:0019825: oxygen binding1.98E-02
135GO:0005249: voltage-gated potassium channel activity2.05E-02
136GO:0030551: cyclic nucleotide binding2.05E-02
137GO:0004791: thioredoxin-disulfide reductase activity2.27E-02
138GO:0016853: isomerase activity2.27E-02
139GO:0050662: coenzyme binding2.27E-02
140GO:0004872: receptor activity2.39E-02
141GO:0048038: quinone binding2.51E-02
142GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor2.75E-02
143GO:0015250: water channel activity3.26E-02
144GO:0042802: identical protein binding3.54E-02
145GO:0004806: triglyceride lipase activity3.66E-02
146GO:0015238: drug transmembrane transporter activity4.08E-02
RankGO TermAdjusted P value
1GO:0000221: vacuolar proton-transporting V-type ATPase, V1 domain0.00E+00
2GO:0016469: proton-transporting two-sector ATPase complex0.00E+00
3GO:0005773: vacuole8.07E-11
4GO:0005747: mitochondrial respiratory chain complex I4.28E-09
5GO:0045271: respiratory chain complex I2.90E-06
6GO:0045273: respiratory chain complex II5.16E-06
7GO:0005749: mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone)5.16E-06
8GO:0000275: mitochondrial proton-transporting ATP synthase complex, catalytic core F(1)4.39E-05
9GO:0005774: vacuolar membrane2.14E-04
10GO:0005829: cytosol2.16E-04
11GO:0031966: mitochondrial membrane2.19E-04
12GO:0005697: telomerase holoenzyme complex5.59E-04
13GO:0000325: plant-type vacuole7.70E-04
14GO:0005764: lysosome8.19E-04
15GO:0005753: mitochondrial proton-transporting ATP synthase complex9.14E-04
16GO:0005849: mRNA cleavage factor complex1.29E-03
17GO:0000323: lytic vacuole1.29E-03
18GO:0016471: vacuolar proton-transporting V-type ATPase complex1.73E-03
19GO:0008250: oligosaccharyltransferase complex2.21E-03
20GO:0005746: mitochondrial respiratory chain2.21E-03
21GO:0031463: Cul3-RING ubiquitin ligase complex2.72E-03
22GO:0010319: stromule3.49E-03
23GO:0005788: endoplasmic reticulum lumen4.15E-03
24GO:0009501: amyloplast4.48E-03
25GO:0005783: endoplasmic reticulum4.53E-03
26GO:0009536: plastid4.73E-03
27GO:0009507: chloroplast8.56E-03
28GO:0009570: chloroplast stroma9.36E-03
29GO:0009508: plastid chromosome9.66E-03
30GO:0005750: mitochondrial respiratory chain complex III1.05E-02
31GO:0005739: mitochondrion1.14E-02
32GO:0009505: plant-type cell wall1.55E-02
33GO:0005759: mitochondrial matrix2.54E-02
34GO:0071944: cell periphery2.75E-02
35GO:0005576: extracellular region2.93E-02
36GO:0005887: integral component of plasma membrane2.97E-02
37GO:0009295: nucleoid3.00E-02
38GO:0005615: extracellular space3.12E-02
39GO:0048046: apoplast3.77E-02
40GO:0005618: cell wall4.41E-02
41GO:0016020: membrane4.87E-02
<
Gene type



Gene DE type