GO Enrichment Analysis of Co-expressed Genes with
AT2G46100
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0032928: regulation of superoxide anion generation | 0.00E+00 |
| 2 | GO:0006720: isoprenoid metabolic process | 0.00E+00 |
| 3 | GO:0036172: thiamine salvage | 0.00E+00 |
| 4 | GO:0006285: base-excision repair, AP site formation | 4.31E-05 |
| 5 | GO:0080065: 4-alpha-methyl-delta7-sterol oxidation | 4.31E-05 |
| 6 | GO:0097502: mannosylation | 4.31E-05 |
| 7 | GO:0016487: farnesol metabolic process | 4.31E-05 |
| 8 | GO:0016031: tRNA import into mitochondrion | 4.31E-05 |
| 9 | GO:0016122: xanthophyll metabolic process | 1.07E-04 |
| 10 | GO:0009150: purine ribonucleotide metabolic process | 1.84E-04 |
| 11 | GO:0006296: nucleotide-excision repair, DNA incision, 5'-to lesion | 1.84E-04 |
| 12 | GO:0009647: skotomorphogenesis | 2.70E-04 |
| 13 | GO:0009399: nitrogen fixation | 2.70E-04 |
| 14 | GO:0009963: positive regulation of flavonoid biosynthetic process | 2.70E-04 |
| 15 | GO:0034613: cellular protein localization | 3.64E-04 |
| 16 | GO:0006542: glutamine biosynthetic process | 3.64E-04 |
| 17 | GO:0009649: entrainment of circadian clock | 3.64E-04 |
| 18 | GO:0010117: photoprotection | 4.63E-04 |
| 19 | GO:0046283: anthocyanin-containing compound metabolic process | 4.63E-04 |
| 20 | GO:0009229: thiamine diphosphate biosynthetic process | 4.63E-04 |
| 21 | GO:0033365: protein localization to organelle | 5.67E-04 |
| 22 | GO:0009117: nucleotide metabolic process | 5.67E-04 |
| 23 | GO:0009228: thiamine biosynthetic process | 5.67E-04 |
| 24 | GO:0009704: de-etiolation | 9.08E-04 |
| 25 | GO:0009231: riboflavin biosynthetic process | 9.08E-04 |
| 26 | GO:1900865: chloroplast RNA modification | 1.29E-03 |
| 27 | GO:0006535: cysteine biosynthetic process from serine | 1.43E-03 |
| 28 | GO:0000103: sulfate assimilation | 1.43E-03 |
| 29 | GO:0009688: abscisic acid biosynthetic process | 1.43E-03 |
| 30 | GO:0009641: shade avoidance | 1.43E-03 |
| 31 | GO:0006790: sulfur compound metabolic process | 1.72E-03 |
| 32 | GO:0048440: carpel development | 2.03E-03 |
| 33 | GO:0019344: cysteine biosynthetic process | 2.52E-03 |
| 34 | GO:0016226: iron-sulfur cluster assembly | 3.06E-03 |
| 35 | GO:0007005: mitochondrion organization | 3.06E-03 |
| 36 | GO:0006284: base-excision repair | 3.43E-03 |
| 37 | GO:0009658: chloroplast organization | 3.88E-03 |
| 38 | GO:0008654: phospholipid biosynthetic process | 4.43E-03 |
| 39 | GO:0030163: protein catabolic process | 5.07E-03 |
| 40 | GO:0016126: sterol biosynthetic process | 5.98E-03 |
| 41 | GO:0042128: nitrate assimilation | 6.45E-03 |
| 42 | GO:0048573: photoperiodism, flowering | 6.69E-03 |
| 43 | GO:0008152: metabolic process | 7.80E-03 |
| 44 | GO:0010119: regulation of stomatal movement | 7.95E-03 |
| 45 | GO:0009640: photomorphogenesis | 1.01E-02 |
| 46 | GO:0009809: lignin biosynthetic process | 1.25E-02 |
| 47 | GO:0006486: protein glycosylation | 1.25E-02 |
| 48 | GO:0009585: red, far-red light phototransduction | 1.25E-02 |
| 49 | GO:0010224: response to UV-B | 1.28E-02 |
| 50 | GO:0006417: regulation of translation | 1.34E-02 |
| 51 | GO:0009739: response to gibberellin | 2.56E-02 |
| 52 | GO:0009723: response to ethylene | 3.58E-02 |
| 53 | GO:0010200: response to chitin | 3.85E-02 |
| 54 | GO:0009751: response to salicylic acid | 4.90E-02 |
| 55 | GO:0006281: DNA repair | 4.95E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0047710: bis(5'-adenosyl)-triphosphatase activity | 0.00E+00 |
| 2 | GO:0052669: CTP:2-trans,-6-trans-farnesol kinase activity | 0.00E+00 |
| 3 | GO:0004417: hydroxyethylthiazole kinase activity | 0.00E+00 |
| 4 | GO:0052670: geraniol kinase activity | 0.00E+00 |
| 5 | GO:0052668: farnesol kinase activity | 0.00E+00 |
| 6 | GO:0052925: dol-P-Man:Man(5)GlcNAc(2)-PP-Dol alpha-1,3-mannosyltransferase activity | 0.00E+00 |
| 7 | GO:0043530: adenosine 5'-monophosphoramidase activity | 0.00E+00 |
| 8 | GO:0000033: alpha-1,3-mannosyltransferase activity | 0.00E+00 |
| 9 | GO:0052671: geranylgeraniol kinase activity | 0.00E+00 |
| 10 | GO:0047627: adenylylsulfatase activity | 1.10E-06 |
| 11 | GO:0000703: oxidized pyrimidine nucleobase lesion DNA N-glycosylase activity | 4.31E-05 |
| 12 | GO:0052917: dol-P-Man:Man(7)GlcNAc(2)-PP-Dol alpha-1,6-mannosyltransferase activity | 4.31E-05 |
| 13 | GO:0008686: 3,4-dihydroxy-2-butanone-4-phosphate synthase activity | 1.07E-04 |
| 14 | GO:0004848: ureidoglycolate hydrolase activity | 1.84E-04 |
| 15 | GO:0003935: GTP cyclohydrolase II activity | 1.84E-04 |
| 16 | GO:0009001: serine O-acetyltransferase activity | 2.70E-04 |
| 17 | GO:0000254: C-4 methylsterol oxidase activity | 2.70E-04 |
| 18 | GO:0019104: DNA N-glycosylase activity | 3.64E-04 |
| 19 | GO:0005496: steroid binding | 4.63E-04 |
| 20 | GO:0004356: glutamate-ammonia ligase activity | 4.63E-04 |
| 21 | GO:0016407: acetyltransferase activity | 4.63E-04 |
| 22 | GO:0004605: phosphatidate cytidylyltransferase activity | 5.67E-04 |
| 23 | GO:0016621: cinnamoyl-CoA reductase activity | 7.90E-04 |
| 24 | GO:0003824: catalytic activity | 9.91E-04 |
| 25 | GO:0071949: FAD binding | 1.16E-03 |
| 26 | GO:0016491: oxidoreductase activity | 1.30E-03 |
| 27 | GO:0004386: helicase activity | 1.61E-03 |
| 28 | GO:0015266: protein channel activity | 1.87E-03 |
| 29 | GO:0050662: coenzyme binding | 4.23E-03 |
| 30 | GO:0048038: quinone binding | 4.64E-03 |
| 31 | GO:0016597: amino acid binding | 5.75E-03 |
| 32 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 7.19E-03 |
| 33 | GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors | 8.47E-03 |
| 34 | GO:0051537: 2 iron, 2 sulfur cluster binding | 1.07E-02 |
| 35 | GO:0043621: protein self-association | 1.07E-02 |
| 36 | GO:0005198: structural molecule activity | 1.10E-02 |
| 37 | GO:0005506: iron ion binding | 2.52E-02 |
| 38 | GO:0042802: identical protein binding | 2.80E-02 |
| 39 | GO:0008233: peptidase activity | 3.71E-02 |
| 40 | GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting | 4.27E-02 |
| 41 | GO:0000981: RNA polymerase II transcription factor activity, sequence-specific DNA binding | 4.61E-02 |
| 42 | GO:0005515: protein binding | 4.81E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0000152: nuclear ubiquitin ligase complex | 4.31E-05 |
| 2 | GO:0009507: chloroplast | 4.61E-05 |
| 3 | GO:0009570: chloroplast stroma | 2.45E-04 |
| 4 | GO:0009517: PSII associated light-harvesting complex II | 3.64E-04 |
| 5 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 1.16E-03 |
| 6 | GO:0042644: chloroplast nucleoid | 1.16E-03 |
| 7 | GO:0016604: nuclear body | 1.29E-03 |
| 8 | GO:0005744: mitochondrial inner membrane presequence translocase complex | 3.43E-03 |
| 9 | GO:0031969: chloroplast membrane | 4.80E-03 |
| 10 | GO:0009941: chloroplast envelope | 8.93E-03 |
| 11 | GO:0009535: chloroplast thylakoid membrane | 1.33E-02 |
| 12 | GO:0016607: nuclear speck | 1.44E-02 |
| 13 | GO:0005777: peroxisome | 1.45E-02 |
| 14 | GO:0012505: endomembrane system | 1.57E-02 |
| 15 | GO:0080008: Cul4-RING E3 ubiquitin ligase complex | 3.44E-02 |
| 16 | GO:0005789: endoplasmic reticulum membrane | 3.90E-02 |