co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT2G45680

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:1990569: UDP-N-acetylglucosamine transmembrane transport	0.00E+00
2	GO:0015789: UDP-N-acetylgalactosamine transport	0.00E+00
3	GO:0001881: receptor recycling	0.00E+00
4	GO:1903070: negative regulation of ER-associated ubiquitin-dependent protein catabolic process	0.00E+00
5	GO:1903857: negative regulation of cytokinin dehydrogenase activity	0.00E+00
6	GO:0023052: signaling	0.00E+00
7	GO:0042362: fat-soluble vitamin biosynthetic process	0.00E+00
8	GO:0042430: indole-containing compound metabolic process	0.00E+00
9	GO:0080184: response to phenylpropanoid	0.00E+00
10	GO:0030149: sphingolipid catabolic process	0.00E+00
11	GO:0006412: translation	4.57E-10
12	GO:0042254: ribosome biogenesis	5.82E-06
13	GO:0015798: myo-inositol transport	2.51E-04
14	GO:1990542: mitochondrial transmembrane transport	2.51E-04
15	GO:1901349: glucosinolate transport	2.51E-04
16	GO:0090449: phloem glucosinolate loading	2.51E-04
17	GO:0015786: UDP-glucose transport	5.53E-04
18	GO:0019752: carboxylic acid metabolic process	5.53E-04
19	GO:0045905: positive regulation of translational termination	5.53E-04
20	GO:1990069: stomatal opening	5.53E-04
21	GO:0045901: positive regulation of translational elongation	5.53E-04
22	GO:0006123: mitochondrial electron transport, cytochrome c to oxygen	5.53E-04
23	GO:0006452: translational frameshifting	5.53E-04
24	GO:0009915: phloem sucrose loading	5.53E-04
25	GO:0042744: hydrogen peroxide catabolic process	7.34E-04
26	GO:0009853: photorespiration	8.49E-04
27	GO:0006869: lipid transport	8.93E-04
28	GO:0045793: positive regulation of cell size	8.99E-04
29	GO:0015783: GDP-fucose transport	8.99E-04
30	GO:0034227: tRNA thio-modification	8.99E-04
31	GO:0008333: endosome to lysosome transport	8.99E-04
32	GO:1902626: assembly of large subunit precursor of preribosome	8.99E-04
33	GO:0006168: adenine salvage	1.28E-03
34	GO:0001676: long-chain fatty acid metabolic process	1.28E-03
35	GO:0046513: ceramide biosynthetic process	1.28E-03
36	GO:0032877: positive regulation of DNA endoreduplication	1.28E-03
37	GO:0046836: glycolipid transport	1.28E-03
38	GO:0006166: purine ribonucleoside salvage	1.28E-03
39	GO:0006107: oxaloacetate metabolic process	1.28E-03
40	GO:0072334: UDP-galactose transmembrane transport	1.28E-03
41	GO:0009963: positive regulation of flavonoid biosynthetic process	1.28E-03
42	GO:0048511: rhythmic process	1.34E-03
43	GO:0061077: chaperone-mediated protein folding	1.34E-03
44	GO:0032968: positive regulation of transcription elongation from RNA polymerase II promoter	1.71E-03
45	GO:0051781: positive regulation of cell division	1.71E-03
46	GO:0010363: regulation of plant-type hypersensitive response	1.71E-03
47	GO:0015991: ATP hydrolysis coupled proton transport	2.02E-03
48	GO:0006564: L-serine biosynthetic process	2.19E-03
49	GO:0097428: protein maturation by iron-sulfur cluster transfer	2.19E-03
50	GO:1902183: regulation of shoot apical meristem development	2.19E-03
51	GO:0044209: AMP salvage	2.19E-03
52	GO:0045116: protein neddylation	2.19E-03
53	GO:0009697: salicylic acid biosynthetic process	2.19E-03
54	GO:0009735: response to cytokinin	2.56E-03
55	GO:0009635: response to herbicide	2.70E-03
56	GO:0010189: vitamin E biosynthetic process	3.24E-03
57	GO:0009648: photoperiodism	3.24E-03
58	GO:1901001: negative regulation of response to salt stress	3.24E-03
59	GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response	3.24E-03
60	GO:0006122: mitochondrial electron transport, ubiquinol to cytochrome c	3.82E-03
61	GO:0009690: cytokinin metabolic process	4.44E-03
62	GO:0048658: anther wall tapetum development	4.44E-03
63	GO:0006102: isocitrate metabolic process	4.44E-03
64	GO:0009642: response to light intensity	4.44E-03
65	GO:0006506: GPI anchor biosynthetic process	4.44E-03
66	GO:0006367: transcription initiation from RNA polymerase II promoter	5.08E-03
67	GO:0006754: ATP biosynthetic process	5.75E-03
68	GO:0015780: nucleotide-sugar transport	5.75E-03
69	GO:0098656: anion transmembrane transport	5.75E-03
70	GO:0009245: lipid A biosynthetic process	5.75E-03
71	GO:0080144: amino acid homeostasis	5.75E-03
72	GO:0010043: response to zinc ion	5.83E-03
73	GO:0042761: very long-chain fatty acid biosynthetic process	6.46E-03
74	GO:0006099: tricarboxylic acid cycle	6.68E-03
75	GO:0006032: chitin catabolic process	7.20E-03
76	GO:0006631: fatty acid metabolic process	7.59E-03
77	GO:0000272: polysaccharide catabolic process	7.96E-03
78	GO:0072593: reactive oxygen species metabolic process	7.96E-03
79	GO:0009926: auxin polar transport	8.24E-03
80	GO:0016925: protein sumoylation	8.75E-03
81	GO:0006820: anion transport	8.75E-03
82	GO:0015706: nitrate transport	8.75E-03
83	GO:0008643: carbohydrate transport	8.92E-03
84	GO:0006108: malate metabolic process	9.57E-03
85	GO:0006006: glucose metabolic process	9.57E-03
86	GO:0006807: nitrogen compound metabolic process	9.57E-03
87	GO:0006855: drug transmembrane transport	9.62E-03
88	GO:0031347: regulation of defense response	9.99E-03
89	GO:0007034: vacuolar transport	1.04E-02
90	GO:0010223: secondary shoot formation	1.04E-02
91	GO:0009266: response to temperature stimulus	1.04E-02
92	GO:0009934: regulation of meristem structural organization	1.04E-02
93	GO:0006979: response to oxidative stress	1.04E-02
94	GO:0002237: response to molecule of bacterial origin	1.04E-02
95	GO:0010167: response to nitrate	1.13E-02
96	GO:0051603: proteolysis involved in cellular protein catabolic process	1.15E-02
97	GO:0006857: oligopeptide transport	1.19E-02
98	GO:0006636: unsaturated fatty acid biosynthetic process	1.22E-02
99	GO:0006071: glycerol metabolic process	1.22E-02
100	GO:0080167: response to karrikin	1.22E-02
101	GO:0006289: nucleotide-excision repair	1.31E-02
102	GO:0009116: nucleoside metabolic process	1.31E-02
103	GO:0000027: ribosomal large subunit assembly	1.31E-02
104	GO:0015992: proton transport	1.50E-02
105	GO:0055114: oxidation-reduction process	1.54E-02
106	GO:0035428: hexose transmembrane transport	1.60E-02
107	GO:0006511: ubiquitin-dependent protein catabolic process	1.80E-02
108	GO:0010089: xylem development	1.81E-02
109	GO:0010584: pollen exine formation	1.81E-02
110	GO:0016117: carotenoid biosynthetic process	1.92E-02
111	GO:0042147: retrograde transport, endosome to Golgi	1.92E-02
112	GO:0080022: primary root development	2.02E-02
113	GO:0000413: protein peptidyl-prolyl isomerization	2.02E-02
114	GO:0010118: stomatal movement	2.02E-02
115	GO:0042631: cellular response to water deprivation	2.02E-02
116	GO:0046323: glucose import	2.14E-02
117	GO:0006520: cellular amino acid metabolic process	2.14E-02
118	GO:0006623: protein targeting to vacuole	2.36E-02
119	GO:0010183: pollen tube guidance	2.36E-02
120	GO:0000302: response to reactive oxygen species	2.48E-02
121	GO:0080156: mitochondrial mRNA modification	2.48E-02
122	GO:0010193: response to ozone	2.48E-02
123	GO:0006413: translational initiation	2.56E-02
124	GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process	3.08E-02
125	GO:0000910: cytokinesis	3.10E-02
126	GO:0009414: response to water deprivation	3.14E-02
127	GO:0009651: response to salt stress	3.17E-02
128	GO:0009607: response to biotic stimulus	3.36E-02
129	GO:0042128: nitrate assimilation	3.49E-02
130	GO:0006950: response to stress	3.62E-02
131	GO:0009407: toxin catabolic process	4.18E-02
132	GO:0010119: regulation of stomatal movement	4.32E-02
133	GO:0045087: innate immune response	4.61E-02

Rank	GO Term	Adjusted P value
1	GO:0010176: homogentisate phytyltransferase activity	0.00E+00
2	GO:0003796: lysozyme activity	0.00E+00
3	GO:0008670: 2,4-dienoyl-CoA reductase (NADPH) activity	0.00E+00
4	GO:0005463: UDP-N-acetylgalactosamine transmembrane transporter activity	0.00E+00
5	GO:0016881: acid-amino acid ligase activity	0.00E+00
6	GO:0008117: sphinganine-1-phosphate aldolase activity	0.00E+00
7	GO:0050152: omega-amidase activity	0.00E+00
8	GO:0003735: structural constituent of ribosome	8.29E-15
9	GO:0003729: mRNA binding	1.84E-04
10	GO:0090448: glucosinolate:proton symporter activity	2.51E-04
11	GO:0008440: inositol-1,4,5-trisphosphate 3-kinase activity	2.51E-04
12	GO:0000824: inositol tetrakisphosphate 3-kinase activity	2.51E-04
13	GO:0047326: inositol tetrakisphosphate 5-kinase activity	2.51E-04
14	GO:0000823: inositol-1,4,5-trisphosphate 6-kinase activity	2.51E-04
15	GO:0005366: myo-inositol:proton symporter activity	5.53E-04
16	GO:0008517: folic acid transporter activity	5.53E-04
17	GO:0050291: sphingosine N-acyltransferase activity	5.53E-04
18	GO:0019781: NEDD8 activating enzyme activity	5.53E-04
19	GO:0004617: phosphoglycerate dehydrogenase activity	5.53E-04
20	GO:0018708: thiol S-methyltransferase activity	5.53E-04
21	GO:0005457: GDP-fucose transmembrane transporter activity	8.99E-04
22	GO:0052692: raffinose alpha-galactosidase activity	8.99E-04
23	GO:0004557: alpha-galactosidase activity	8.99E-04
24	GO:0005528: FK506 binding	1.11E-03
25	GO:0005460: UDP-glucose transmembrane transporter activity	1.28E-03
26	GO:0004365: glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity	1.28E-03
27	GO:0017077: oxidative phosphorylation uncoupler activity	1.28E-03
28	GO:0017089: glycolipid transporter activity	1.28E-03
29	GO:0004449: isocitrate dehydrogenase (NAD+) activity	1.28E-03
30	GO:0003999: adenine phosphoribosyltransferase activity	1.28E-03
31	GO:0004298: threonine-type endopeptidase activity	1.34E-03
32	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	1.41E-03
33	GO:0051287: NAD binding	1.48E-03
34	GO:0008022: protein C-terminus binding	1.71E-03
35	GO:0004659: prenyltransferase activity	1.71E-03
36	GO:0010011: auxin binding	1.71E-03
37	GO:0051861: glycolipid binding	1.71E-03
38	GO:0016810: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds	1.71E-03
39	GO:0070628: proteasome binding	1.71E-03
40	GO:0008514: organic anion transmembrane transporter activity	1.73E-03
41	GO:0004601: peroxidase activity	1.90E-03
42	GO:0008289: lipid binding	1.95E-03
43	GO:0031386: protein tag	2.19E-03
44	GO:0005459: UDP-galactose transmembrane transporter activity	2.19E-03
45	GO:0008641: small protein activating enzyme activity	2.19E-03
46	GO:0004040: amidase activity	2.19E-03
47	GO:0020037: heme binding	2.43E-03
48	GO:0031177: phosphopantetheine binding	2.70E-03
49	GO:0031593: polyubiquitin binding	2.70E-03
50	GO:0000035: acyl binding	3.24E-03
51	GO:0102391: decanoate--CoA ligase activity	3.24E-03
52	GO:0004467: long-chain fatty acid-CoA ligase activity	3.82E-03
53	GO:0016831: carboxy-lyase activity	3.82E-03
54	GO:0005338: nucleotide-sugar transmembrane transporter activity	3.82E-03
55	GO:0043022: ribosome binding	4.44E-03
56	GO:0015288: porin activity	4.44E-03
57	GO:0000036: ACP phosphopantetheine attachment site binding involved in fatty acid biosynthetic process	4.44E-03
58	GO:0052747: sinapyl alcohol dehydrogenase activity	4.44E-03
59	GO:0008308: voltage-gated anion channel activity	5.08E-03
60	GO:0005507: copper ion binding	5.56E-03
61	GO:0000989: transcription factor activity, transcription factor binding	5.75E-03
62	GO:0008553: hydrogen-exporting ATPase activity, phosphorylative mechanism	5.75E-03
63	GO:0008889: glycerophosphodiester phosphodiesterase activity	5.75E-03
64	GO:0015112: nitrate transmembrane transporter activity	6.46E-03
65	GO:0004568: chitinase activity	7.20E-03
66	GO:0004364: glutathione transferase activity	7.91E-03
67	GO:0046961: proton-transporting ATPase activity, rotational mechanism	7.96E-03
68	GO:0008559: xenobiotic-transporting ATPase activity	7.96E-03
69	GO:0004129: cytochrome-c oxidase activity	7.96E-03
70	GO:0008794: arsenate reductase (glutaredoxin) activity	7.96E-03
71	GO:0045551: cinnamyl-alcohol dehydrogenase activity	8.75E-03
72	GO:0016887: ATPase activity	9.26E-03
73	GO:0043130: ubiquitin binding	1.31E-02
74	GO:0019843: rRNA binding	1.99E-02
75	GO:0005199: structural constituent of cell wall	2.14E-02
76	GO:0005355: glucose transmembrane transporter activity	2.25E-02
77	GO:0004872: receptor activity	2.36E-02
78	GO:0005351: sugar:proton symporter activity	2.69E-02
79	GO:0003684: damaged DNA binding	2.85E-02
80	GO:0016597: amino acid binding	3.10E-02
81	GO:0003743: translation initiation factor activity	3.21E-02
82	GO:0004721: phosphoprotein phosphatase activity	3.62E-02
83	GO:0015238: drug transmembrane transporter activity	4.04E-02
84	GO:0000287: magnesium ion binding	4.16E-02
85	GO:0016788: hydrolase activity, acting on ester bonds	4.32E-02
86	GO:0030145: manganese ion binding	4.32E-02
87	GO:0050897: cobalt ion binding	4.32E-02
88	GO:0003746: translation elongation factor activity	4.61E-02
89	GO:0003697: single-stranded DNA binding	4.61E-02
90	GO:0003993: acid phosphatase activity	4.76E-02
91	GO:0008422: beta-glucosidase activity	4.90E-02

Rank	GO Term	Adjusted P value
1	GO:0022625: cytosolic large ribosomal subunit	5.98E-13
2	GO:0005840: ribosome	9.16E-13
3	GO:0005774: vacuolar membrane	5.57E-08
4	GO:0005773: vacuole	1.58E-07
5	GO:0022626: cytosolic ribosome	3.05E-07
6	GO:0015934: large ribosomal subunit	4.34E-06
7	GO:0005783: endoplasmic reticulum	4.95E-06
8	GO:0005829: cytosol	1.16E-05
9	GO:0005886: plasma membrane	1.38E-05
10	GO:0000502: proteasome complex	2.19E-05
11	GO:0022627: cytosolic small ribosomal subunit	3.68E-05
12	GO:0016020: membrane	4.34E-05
13	GO:0009506: plasmodesma	3.89E-04
14	GO:0005788: endoplasmic reticulum lumen	4.83E-04
15	GO:0009530: primary cell wall	8.99E-04
16	GO:0046861: glyoxysomal membrane	8.99E-04
17	GO:0005618: cell wall	9.21E-04
18	GO:0045271: respiratory chain complex I	1.22E-03
19	GO:0070469: respiratory chain	1.22E-03
20	GO:0033180: proton-transporting V-type ATPase, V1 domain	1.28E-03
21	GO:0005839: proteasome core complex	1.34E-03
22	GO:0005746: mitochondrial respiratory chain	2.19E-03
23	GO:0005794: Golgi apparatus	2.63E-03
24	GO:0005771: multivesicular body	2.70E-03
25	GO:0030904: retromer complex	2.70E-03
26	GO:0005737: cytoplasm	4.22E-03
27	GO:0045273: respiratory chain complex II	4.44E-03
28	GO:0005749: mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone)	4.44E-03
29	GO:0046930: pore complex	5.08E-03
30	GO:0009514: glyoxysome	5.08E-03
31	GO:0031090: organelle membrane	5.75E-03
32	GO:0000325: plant-type vacuole	5.83E-03
33	GO:0090406: pollen tube	8.24E-03
34	GO:0031966: mitochondrial membrane	1.04E-02
35	GO:0005750: mitochondrial respiratory chain complex III	1.04E-02
36	GO:0005758: mitochondrial intermembrane space	1.31E-02
37	GO:0005747: mitochondrial respiratory chain complex I	1.36E-02
38	GO:0016021: integral component of membrane	1.49E-02
39	GO:0005741: mitochondrial outer membrane	1.50E-02
40	GO:0005730: nucleolus	2.52E-02
41	GO:0009707: chloroplast outer membrane	3.90E-02
42	GO:0009507: chloroplast	4.57E-02