co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT2G45630

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0010336: gibberellic acid homeostasis	0.00E+00
2	GO:0045747: positive regulation of Notch signaling pathway	0.00E+00
3	GO:0045740: positive regulation of DNA replication	0.00E+00
4	GO:0048870: cell motility	0.00E+00
5	GO:0048438: floral whorl development	5.94E-05
6	GO:0007163: establishment or maintenance of cell polarity	1.44E-04
7	GO:0019441: tryptophan catabolic process to kynurenine	1.44E-04
8	GO:0010476: gibberellin mediated signaling pathway	2.46E-04
9	GO:0010325: raffinose family oligosaccharide biosynthetic process	2.46E-04
10	GO:0000394: RNA splicing, via endonucleolytic cleavage and ligation	2.46E-04
11	GO:0006516: glycoprotein catabolic process	3.57E-04
12	GO:0009939: positive regulation of gibberellic acid mediated signaling pathway	4.78E-04
13	GO:0071249: cellular response to nitrate	4.78E-04
14	GO:0006221: pyrimidine nucleotide biosynthetic process	4.78E-04
15	GO:0030041: actin filament polymerization	6.05E-04
16	GO:0016070: RNA metabolic process	7.40E-04
17	GO:0045736: negative regulation of cyclin-dependent protein serine/threonine kinase activity	7.40E-04
18	GO:0031053: primary miRNA processing	7.40E-04
19	GO:0048527: lateral root development	8.51E-04
20	GO:0010076: maintenance of floral meristem identity	8.82E-04
21	GO:0010016: shoot system morphogenesis	8.82E-04
22	GO:0048444: floral organ morphogenesis	8.82E-04
23	GO:0000082: G1/S transition of mitotic cell cycle	1.03E-03
24	GO:0050790: regulation of catalytic activity	1.03E-03
25	GO:0007050: cell cycle arrest	1.03E-03
26	GO:0045010: actin nucleation	1.18E-03
27	GO:0045292: mRNA cis splicing, via spliceosome	1.18E-03
28	GO:0009821: alkaloid biosynthetic process	1.52E-03
29	GO:0009056: catabolic process	1.52E-03
30	GO:0000902: cell morphogenesis	1.52E-03
31	GO:0098656: anion transmembrane transport	1.52E-03
32	GO:0032259: methylation	1.53E-03
33	GO:0048367: shoot system development	1.91E-03
34	GO:0010582: floral meristem determinacy	2.27E-03
35	GO:0010152: pollen maturation	2.27E-03
36	GO:0010102: lateral root morphogenesis	2.47E-03
37	GO:0009266: response to temperature stimulus	2.68E-03
38	GO:0000162: tryptophan biosynthetic process	3.11E-03
39	GO:2000377: regulation of reactive oxygen species metabolic process	3.34E-03
40	GO:0006487: protein N-linked glycosylation	3.34E-03
41	GO:0007017: microtubule-based process	3.57E-03
42	GO:0048443: stamen development	4.55E-03
43	GO:0080022: primary root development	5.07E-03
44	GO:0009851: auxin biosynthetic process	5.89E-03
45	GO:0010090: trichome morphogenesis	6.75E-03
46	GO:0048366: leaf development	6.90E-03
47	GO:0016579: protein deubiquitination	7.65E-03
48	GO:0044550: secondary metabolite biosynthetic process	7.90E-03
49	GO:0042128: nitrate assimilation	8.60E-03
50	GO:0010411: xyloglucan metabolic process	8.92E-03
51	GO:0010311: lateral root formation	9.93E-03
52	GO:0010043: response to zinc ion	1.06E-02
53	GO:0009910: negative regulation of flower development	1.06E-02
54	GO:0006629: lipid metabolic process	1.07E-02
55	GO:0006260: DNA replication	1.55E-02
56	GO:0000165: MAPK cascade	1.55E-02
57	GO:0051603: proteolysis involved in cellular protein catabolic process	1.71E-02
58	GO:0006857: oligopeptide transport	1.76E-02
59	GO:0000398: mRNA splicing, via spliceosome	2.38E-02
60	GO:0009058: biosynthetic process	2.62E-02
61	GO:0010150: leaf senescence	3.17E-02
62	GO:0009739: response to gibberellin	3.44E-02
63	GO:0006470: protein dephosphorylation	3.49E-02
64	GO:0045944: positive regulation of transcription from RNA polymerase II promoter	4.10E-02
65	GO:0055114: oxidation-reduction process	4.57E-02
66	GO:0007049: cell cycle	4.68E-02

Rank	GO Term	Adjusted P value
1	GO:0019707: protein-cysteine S-acyltransferase activity	5.94E-05
2	GO:0033984: indole-3-glycerol-phosphate lyase activity	5.94E-05
3	GO:0004560: alpha-L-fucosidase activity	5.94E-05
4	GO:0004061: arylformamidase activity	1.44E-04
5	GO:0010331: gibberellin binding	1.44E-04
6	GO:0004046: aminoacylase activity	1.44E-04
7	GO:0032403: protein complex binding	2.46E-04
8	GO:0000900: translation repressor activity, nucleic acid binding	2.46E-04
9	GO:0017176: phosphatidylinositol N-acetylglucosaminyltransferase activity	2.46E-04
10	GO:0016787: hydrolase activity	2.52E-04
11	GO:0003865: 3-oxo-5-alpha-steroid 4-dehydrogenase activity	3.57E-04
12	GO:0000339: RNA cap binding	3.57E-04
13	GO:0004834: tryptophan synthase activity	4.78E-04
14	GO:0010011: auxin binding	4.78E-04
15	GO:0004806: triglyceride lipase activity	6.71E-04
16	GO:0008168: methyltransferase activity	7.31E-04
17	GO:0004861: cyclin-dependent protein serine/threonine kinase inhibitor activity	7.40E-04
18	GO:0008143: poly(A) binding	1.03E-03
19	GO:0008138: protein tyrosine/serine/threonine phosphatase activity	1.52E-03
20	GO:0016627: oxidoreductase activity, acting on the CH-CH group of donors	1.52E-03
21	GO:0047617: acyl-CoA hydrolase activity	1.69E-03
22	GO:0016844: strictosidine synthase activity	1.69E-03
23	GO:0005315: inorganic phosphate transmembrane transporter activity	2.47E-03
24	GO:0003887: DNA-directed DNA polymerase activity	3.11E-03
25	GO:0004725: protein tyrosine phosphatase activity	3.11E-03
26	GO:0008514: organic anion transmembrane transporter activity	4.55E-03
27	GO:0019825: oxygen binding	5.21E-03
28	GO:0016788: hydrolase activity, acting on ester bonds	5.98E-03
29	GO:0004843: thiol-dependent ubiquitin-specific protease activity	6.17E-03
30	GO:0004197: cysteine-type endopeptidase activity	6.46E-03
31	GO:0016413: O-acetyltransferase activity	7.65E-03
32	GO:0005506: iron ion binding	7.99E-03
33	GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	9.40E-03
34	GO:0020037: heme binding	1.46E-02
35	GO:0008234: cysteine-type peptidase activity	1.80E-02
36	GO:0003777: microtubule motor activity	1.80E-02
37	GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups	1.93E-02
38	GO:0022857: transmembrane transporter activity	2.06E-02
39	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	2.57E-02
40	GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding	2.77E-02
41	GO:0015144: carbohydrate transmembrane transporter activity	2.86E-02
42	GO:0005351: sugar:proton symporter activity	3.12E-02
43	GO:0042802: identical protein binding	3.76E-02

Rank	GO Term	Adjusted P value
1	GO:0097708: intracellular vesicle	0.00E+00
2	GO:0005845: mRNA cap binding complex	5.94E-05
3	GO:0005846: nuclear cap binding complex	1.44E-04
4	GO:0030286: dynein complex	4.78E-04
5	GO:0031209: SCAR complex	7.40E-04
6	GO:0005764: lysosome	2.68E-03
7	GO:0005875: microtubule associated complex	3.11E-03
8	GO:0005615: extracellular space	4.25E-03
9	GO:0005773: vacuole	5.77E-03
10	GO:0071944: cell periphery	6.75E-03
11	GO:0005783: endoplasmic reticulum	9.30E-03
12	GO:0005856: cytoskeleton	1.47E-02
13	GO:0005747: mitochondrial respiratory chain complex I	1.93E-02
14	GO:0016021: integral component of membrane	2.11E-02
15	GO:0005654: nucleoplasm	2.47E-02
16	GO:0005737: cytoplasm	2.74E-02
17	GO:0009536: plastid	4.72E-02