GO Enrichment Analysis of Co-expressed Genes with
AT2G44120
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:1990258: histone glutamine methylation | 0.00E+00 |
| 2 | GO:1990569: UDP-N-acetylglucosamine transmembrane transport | 0.00E+00 |
| 3 | GO:0015789: UDP-N-acetylgalactosamine transport | 0.00E+00 |
| 4 | GO:0044843: cell cycle G1/S phase transition | 0.00E+00 |
| 5 | GO:1903070: negative regulation of ER-associated ubiquitin-dependent protein catabolic process | 0.00E+00 |
| 6 | GO:1903857: negative regulation of cytokinin dehydrogenase activity | 0.00E+00 |
| 7 | GO:0000494: box C/D snoRNA 3'-end processing | 0.00E+00 |
| 8 | GO:0006412: translation | 3.40E-140 |
| 9 | GO:0042254: ribosome biogenesis | 5.79E-49 |
| 10 | GO:0000027: ribosomal large subunit assembly | 5.87E-15 |
| 11 | GO:0000028: ribosomal small subunit assembly | 1.83E-07 |
| 12 | GO:0006626: protein targeting to mitochondrion | 2.95E-06 |
| 13 | GO:0006458: 'de novo' protein folding | 5.89E-06 |
| 14 | GO:0009955: adaxial/abaxial pattern specification | 5.89E-06 |
| 15 | GO:0045041: protein import into mitochondrial intermembrane space | 6.42E-06 |
| 16 | GO:0009967: positive regulation of signal transduction | 6.42E-06 |
| 17 | GO:0006364: rRNA processing | 7.36E-06 |
| 18 | GO:1902626: assembly of large subunit precursor of preribosome | 2.24E-05 |
| 19 | GO:0002181: cytoplasmic translation | 2.24E-05 |
| 20 | GO:0009735: response to cytokinin | 2.71E-05 |
| 21 | GO:0042274: ribosomal small subunit biogenesis | 8.71E-05 |
| 22 | GO:0031167: rRNA methylation | 1.36E-04 |
| 23 | GO:0061077: chaperone-mediated protein folding | 2.36E-04 |
| 24 | GO:0042026: protein refolding | 2.63E-04 |
| 25 | GO:0006407: rRNA export from nucleus | 3.78E-04 |
| 26 | GO:0097056: selenocysteinyl-tRNA(Sec) biosynthetic process | 3.78E-04 |
| 27 | GO:0030490: maturation of SSU-rRNA | 3.78E-04 |
| 28 | GO:0006434: seryl-tRNA aminoacylation | 3.78E-04 |
| 29 | GO:0000461: endonucleolytic cleavage to generate mature 3'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 3.78E-04 |
| 30 | GO:0000447: endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 3.78E-04 |
| 31 | GO:0008033: tRNA processing | 4.16E-04 |
| 32 | GO:0001510: RNA methylation | 5.22E-04 |
| 33 | GO:0015786: UDP-glucose transport | 8.22E-04 |
| 34 | GO:0045859: regulation of protein kinase activity | 8.22E-04 |
| 35 | GO:2000072: regulation of defense response to fungus, incompatible interaction | 8.22E-04 |
| 36 | GO:0019919: peptidyl-arginine methylation, to asymmetrical-dimethyl arginine | 8.22E-04 |
| 37 | GO:0048569: post-embryonic animal organ development | 8.22E-04 |
| 38 | GO:0010162: seed dormancy process | 8.60E-04 |
| 39 | GO:0006820: anion transport | 1.13E-03 |
| 40 | GO:0008652: cellular amino acid biosynthetic process | 1.33E-03 |
| 41 | GO:0006954: inflammatory response | 1.33E-03 |
| 42 | GO:0009150: purine ribonucleotide metabolic process | 1.33E-03 |
| 43 | GO:0015783: GDP-fucose transport | 1.33E-03 |
| 44 | GO:0010476: gibberellin mediated signaling pathway | 1.33E-03 |
| 45 | GO:0042256: mature ribosome assembly | 1.33E-03 |
| 46 | GO:0006414: translational elongation | 1.75E-03 |
| 47 | GO:0006165: nucleoside diphosphate phosphorylation | 1.92E-03 |
| 48 | GO:0006228: UTP biosynthetic process | 1.92E-03 |
| 49 | GO:0006164: purine nucleotide biosynthetic process | 1.92E-03 |
| 50 | GO:0046513: ceramide biosynthetic process | 1.92E-03 |
| 51 | GO:0070301: cellular response to hydrogen peroxide | 1.92E-03 |
| 52 | GO:0006241: CTP biosynthetic process | 1.92E-03 |
| 53 | GO:0072334: UDP-galactose transmembrane transport | 1.92E-03 |
| 54 | GO:0030150: protein import into mitochondrial matrix | 1.99E-03 |
| 55 | GO:0008283: cell proliferation | 2.50E-03 |
| 56 | GO:0006183: GTP biosynthetic process | 2.58E-03 |
| 57 | GO:0071215: cellular response to abscisic acid stimulus | 2.89E-03 |
| 58 | GO:0040007: growth | 2.89E-03 |
| 59 | GO:1902183: regulation of shoot apical meristem development | 3.30E-03 |
| 60 | GO:0000741: karyogamy | 4.08E-03 |
| 61 | GO:0001731: formation of translation preinitiation complex | 4.08E-03 |
| 62 | GO:0000470: maturation of LSU-rRNA | 4.08E-03 |
| 63 | GO:0009749: response to glucose | 4.57E-03 |
| 64 | GO:0000245: spliceosomal complex assembly | 4.92E-03 |
| 65 | GO:0016444: somatic cell DNA recombination | 4.92E-03 |
| 66 | GO:0009648: photoperiodism | 4.92E-03 |
| 67 | GO:0050821: protein stabilization | 6.75E-03 |
| 68 | GO:0001558: regulation of cell growth | 7.75E-03 |
| 69 | GO:0043562: cellular response to nitrogen levels | 7.75E-03 |
| 70 | GO:0009793: embryo development ending in seed dormancy | 8.11E-03 |
| 71 | GO:0048507: meristem development | 8.79E-03 |
| 72 | GO:0006189: 'de novo' IMP biosynthetic process | 8.79E-03 |
| 73 | GO:0015780: nucleotide-sugar transport | 8.79E-03 |
| 74 | GO:0098656: anion transmembrane transport | 8.79E-03 |
| 75 | GO:0007338: single fertilization | 8.79E-03 |
| 76 | GO:0009051: pentose-phosphate shunt, oxidative branch | 8.79E-03 |
| 77 | GO:0009245: lipid A biosynthetic process | 8.79E-03 |
| 78 | GO:0006098: pentose-phosphate shunt | 8.79E-03 |
| 79 | GO:0046686: response to cadmium ion | 8.92E-03 |
| 80 | GO:0042761: very long-chain fatty acid biosynthetic process | 9.89E-03 |
| 81 | GO:0006413: translational initiation | 1.05E-02 |
| 82 | GO:0030422: production of siRNA involved in RNA interference | 1.10E-02 |
| 83 | GO:0006259: DNA metabolic process | 1.10E-02 |
| 84 | GO:0006913: nucleocytoplasmic transport | 1.22E-02 |
| 85 | GO:0015770: sucrose transport | 1.22E-02 |
| 86 | GO:0010015: root morphogenesis | 1.22E-02 |
| 87 | GO:0006790: sulfur compound metabolic process | 1.34E-02 |
| 88 | GO:0010102: lateral root morphogenesis | 1.47E-02 |
| 89 | GO:0006006: glucose metabolic process | 1.47E-02 |
| 90 | GO:0006094: gluconeogenesis | 1.47E-02 |
| 91 | GO:0002237: response to molecule of bacterial origin | 1.60E-02 |
| 92 | GO:0006446: regulation of translational initiation | 1.60E-02 |
| 93 | GO:0048467: gynoecium development | 1.60E-02 |
| 94 | GO:0009644: response to high light intensity | 1.65E-02 |
| 95 | GO:0009965: leaf morphogenesis | 1.71E-02 |
| 96 | GO:0009944: polarity specification of adaxial/abaxial axis | 2.02E-02 |
| 97 | GO:0051302: regulation of cell division | 2.17E-02 |
| 98 | GO:0051260: protein homooligomerization | 2.32E-02 |
| 99 | GO:0010431: seed maturation | 2.32E-02 |
| 100 | GO:0006334: nucleosome assembly | 2.32E-02 |
| 101 | GO:0006096: glycolytic process | 2.43E-02 |
| 102 | GO:0007005: mitochondrion organization | 2.48E-02 |
| 103 | GO:0048367: shoot system development | 2.51E-02 |
| 104 | GO:0009294: DNA mediated transformation | 2.64E-02 |
| 105 | GO:0010584: pollen exine formation | 2.80E-02 |
| 106 | GO:0010197: polar nucleus fusion | 3.30E-02 |
| 107 | GO:0000302: response to reactive oxygen species | 3.83E-02 |
| 108 | GO:0006635: fatty acid beta-oxidation | 3.83E-02 |
| 109 | GO:0080156: mitochondrial mRNA modification | 3.83E-02 |
| 110 | GO:0009845: seed germination | 3.96E-02 |
| 111 | GO:0009567: double fertilization forming a zygote and endosperm | 4.40E-02 |
| 112 | GO:0006633: fatty acid biosynthetic process | 4.59E-02 |
| 113 | GO:0016579: protein deubiquitination | 4.78E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0004641: phosphoribosylformylglycinamidine cyclo-ligase activity | 0.00E+00 |
| 2 | GO:1990259: histone-glutamine methyltransferase activity | 0.00E+00 |
| 3 | GO:0005463: UDP-N-acetylgalactosamine transmembrane transporter activity | 0.00E+00 |
| 4 | GO:0003735: structural constituent of ribosome | 8.34E-168 |
| 5 | GO:0003729: mRNA binding | 5.25E-31 |
| 6 | GO:0019843: rRNA binding | 3.47E-17 |
| 7 | GO:0003746: translation elongation factor activity | 1.38E-06 |
| 8 | GO:0044183: protein binding involved in protein folding | 1.57E-06 |
| 9 | GO:0005078: MAP-kinase scaffold activity | 6.42E-06 |
| 10 | GO:0030515: snoRNA binding | 9.38E-06 |
| 11 | GO:0008649: rRNA methyltransferase activity | 2.24E-05 |
| 12 | GO:0003723: RNA binding | 2.53E-05 |
| 13 | GO:0008097: 5S rRNA binding | 4.92E-05 |
| 14 | GO:0004679: AMP-activated protein kinase activity | 3.78E-04 |
| 15 | GO:0005080: protein kinase C binding | 3.78E-04 |
| 16 | GO:0004828: serine-tRNA ligase activity | 3.78E-04 |
| 17 | GO:0015288: porin activity | 4.26E-04 |
| 18 | GO:0008308: voltage-gated anion channel activity | 5.22E-04 |
| 19 | GO:0001055: RNA polymerase II activity | 7.38E-04 |
| 20 | GO:0035241: protein-arginine omega-N monomethyltransferase activity | 8.22E-04 |
| 21 | GO:0043141: ATP-dependent 5'-3' DNA helicase activity | 8.22E-04 |
| 22 | GO:0016277: [myelin basic protein]-arginine N-methyltransferase activity | 8.22E-04 |
| 23 | GO:0035242: protein-arginine omega-N asymmetric methyltransferase activity | 8.22E-04 |
| 24 | GO:0050291: sphingosine N-acyltransferase activity | 8.22E-04 |
| 25 | GO:0004618: phosphoglycerate kinase activity | 8.22E-04 |
| 26 | GO:0001054: RNA polymerase I activity | 9.90E-04 |
| 27 | GO:0051082: unfolded protein binding | 1.07E-03 |
| 28 | GO:0001056: RNA polymerase III activity | 1.13E-03 |
| 29 | GO:0032947: protein complex scaffold | 1.33E-03 |
| 30 | GO:0005457: GDP-fucose transmembrane transporter activity | 1.33E-03 |
| 31 | GO:0008469: histone-arginine N-methyltransferase activity | 1.33E-03 |
| 32 | GO:0015462: ATPase-coupled protein transmembrane transporter activity | 1.33E-03 |
| 33 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 1.34E-03 |
| 34 | GO:0005460: UDP-glucose transmembrane transporter activity | 1.92E-03 |
| 35 | GO:0004550: nucleoside diphosphate kinase activity | 1.92E-03 |
| 36 | GO:0047627: adenylylsulfatase activity | 1.92E-03 |
| 37 | GO:0019201: nucleotide kinase activity | 1.92E-03 |
| 38 | GO:0004407: histone deacetylase activity | 1.99E-03 |
| 39 | GO:0004345: glucose-6-phosphate dehydrogenase activity | 2.58E-03 |
| 40 | GO:0005459: UDP-galactose transmembrane transporter activity | 3.30E-03 |
| 41 | GO:0031369: translation initiation factor binding | 4.08E-03 |
| 42 | GO:0031177: phosphopantetheine binding | 4.08E-03 |
| 43 | GO:0003860: 3-hydroxyisobutyryl-CoA hydrolase activity | 4.08E-03 |
| 44 | GO:0004332: fructose-bisphosphate aldolase activity | 4.08E-03 |
| 45 | GO:0004017: adenylate kinase activity | 4.92E-03 |
| 46 | GO:0000035: acyl binding | 4.92E-03 |
| 47 | GO:0019887: protein kinase regulator activity | 4.92E-03 |
| 48 | GO:0005338: nucleotide-sugar transmembrane transporter activity | 5.81E-03 |
| 49 | GO:0008235: metalloexopeptidase activity | 5.81E-03 |
| 50 | GO:0000036: ACP phosphopantetheine attachment site binding involved in fatty acid biosynthetic process | 6.75E-03 |
| 51 | GO:0008135: translation factor activity, RNA binding | 7.75E-03 |
| 52 | GO:0003678: DNA helicase activity | 8.79E-03 |
| 53 | GO:0050897: cobalt ion binding | 1.07E-02 |
| 54 | GO:0008515: sucrose transmembrane transporter activity | 1.22E-02 |
| 55 | GO:0000049: tRNA binding | 1.34E-02 |
| 56 | GO:0003743: translation initiation factor activity | 1.40E-02 |
| 57 | GO:0015266: protein channel activity | 1.47E-02 |
| 58 | GO:0051119: sugar transmembrane transporter activity | 1.74E-02 |
| 59 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 2.05E-02 |
| 60 | GO:0051087: chaperone binding | 2.17E-02 |
| 61 | GO:0036459: thiol-dependent ubiquitinyl hydrolase activity | 2.32E-02 |
| 62 | GO:0008514: organic anion transmembrane transporter activity | 2.80E-02 |
| 63 | GO:0000166: nucleotide binding | 2.83E-02 |
| 64 | GO:0010181: FMN binding | 3.48E-02 |
| 65 | GO:0008237: metallopeptidase activity | 4.59E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0005832: chaperonin-containing T-complex | 0.00E+00 |
| 2 | GO:0005840: ribosome | 3.21E-115 |
| 3 | GO:0022625: cytosolic large ribosomal subunit | 1.47E-108 |
| 4 | GO:0022626: cytosolic ribosome | 8.18E-102 |
| 5 | GO:0022627: cytosolic small ribosomal subunit | 1.75E-66 |
| 6 | GO:0005730: nucleolus | 2.39E-39 |
| 7 | GO:0005737: cytoplasm | 3.03E-34 |
| 8 | GO:0005829: cytosol | 7.36E-30 |
| 9 | GO:0009506: plasmodesma | 7.89E-26 |
| 10 | GO:0005774: vacuolar membrane | 1.72E-16 |
| 11 | GO:0015934: large ribosomal subunit | 4.09E-16 |
| 12 | GO:0015935: small ribosomal subunit | 1.58E-12 |
| 13 | GO:0016020: membrane | 3.16E-11 |
| 14 | GO:0005773: vacuole | 7.66E-11 |
| 15 | GO:0005618: cell wall | 2.13E-10 |
| 16 | GO:0031428: box C/D snoRNP complex | 3.42E-06 |
| 17 | GO:0009507: chloroplast | 1.21E-05 |
| 18 | GO:0005886: plasma membrane | 2.11E-05 |
| 19 | GO:0032040: small-subunit processome | 7.50E-05 |
| 20 | GO:0030686: 90S preribosome | 3.78E-04 |
| 21 | GO:0046930: pore complex | 5.22E-04 |
| 22 | GO:0005736: DNA-directed RNA polymerase I complex | 6.25E-04 |
| 23 | GO:0005666: DNA-directed RNA polymerase III complex | 7.38E-04 |
| 24 | GO:0015030: Cajal body | 7.38E-04 |
| 25 | GO:0000418: DNA-directed RNA polymerase IV complex | 8.60E-04 |
| 26 | GO:0005665: DNA-directed RNA polymerase II, core complex | 1.13E-03 |
| 27 | GO:0005853: eukaryotic translation elongation factor 1 complex | 1.33E-03 |
| 28 | GO:0005758: mitochondrial intermembrane space | 1.99E-03 |
| 29 | GO:0005741: mitochondrial outer membrane | 2.42E-03 |
| 30 | GO:0016282: eukaryotic 43S preinitiation complex | 4.08E-03 |
| 31 | GO:0033290: eukaryotic 48S preinitiation complex | 4.92E-03 |
| 32 | GO:0016272: prefoldin complex | 4.92E-03 |
| 33 | GO:0005742: mitochondrial outer membrane translocase complex | 7.75E-03 |
| 34 | GO:0005622: intracellular | 7.93E-03 |
| 35 | GO:0005743: mitochondrial inner membrane | 1.08E-02 |
| 36 | GO:0005852: eukaryotic translation initiation factor 3 complex | 1.22E-02 |
| 37 | GO:0048471: perinuclear region of cytoplasm | 1.22E-02 |
| 38 | GO:0000419: DNA-directed RNA polymerase V complex | 1.88E-02 |
| 39 | GO:0070469: respiratory chain | 2.17E-02 |
| 40 | GO:0005834: heterotrimeric G-protein complex | 2.59E-02 |
| 41 | GO:0005744: mitochondrial inner membrane presequence translocase complex | 2.80E-02 |
| 42 | GO:0016592: mediator complex | 4.02E-02 |
| 43 | GO:0005759: mitochondrial matrix | 4.59E-02 |
| 44 | GO:0030529: intracellular ribonucleoprotein complex | 4.98E-02 |