GO Enrichment Analysis of Co-expressed Genes with
AT2G43780
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0000740: nuclear membrane fusion | 0.00E+00 |
| 2 | GO:0032211: negative regulation of telomere maintenance via telomerase | 0.00E+00 |
| 3 | GO:0007530: sex determination | 0.00E+00 |
| 4 | GO:0006412: translation | 4.89E-128 |
| 5 | GO:0042254: ribosome biogenesis | 3.28E-53 |
| 6 | GO:0000027: ribosomal large subunit assembly | 3.43E-14 |
| 7 | GO:0006626: protein targeting to mitochondrion | 6.65E-06 |
| 8 | GO:0000028: ribosomal small subunit assembly | 2.62E-05 |
| 9 | GO:0002181: cytoplasmic translation | 3.55E-05 |
| 10 | GO:1902626: assembly of large subunit precursor of preribosome | 3.55E-05 |
| 11 | GO:0006241: CTP biosynthetic process | 7.62E-05 |
| 12 | GO:0006165: nucleoside diphosphate phosphorylation | 7.62E-05 |
| 13 | GO:0006228: UTP biosynthetic process | 7.62E-05 |
| 14 | GO:0009735: response to cytokinin | 9.94E-05 |
| 15 | GO:0006820: anion transport | 1.31E-04 |
| 16 | GO:0006183: GTP biosynthetic process | 1.32E-04 |
| 17 | GO:0009955: adaxial/abaxial pattern specification | 3.85E-04 |
| 18 | GO:0006414: translational elongation | 4.25E-04 |
| 19 | GO:0000398: mRNA splicing, via spliceosome | 4.86E-04 |
| 20 | GO:0015801: aromatic amino acid transport | 4.87E-04 |
| 21 | GO:2001006: regulation of cellulose biosynthetic process | 4.87E-04 |
| 22 | GO:0000461: endonucleolytic cleavage to generate mature 3'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 4.87E-04 |
| 23 | GO:0000447: endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 4.87E-04 |
| 24 | GO:0006407: rRNA export from nucleus | 4.87E-04 |
| 25 | GO:0009651: response to salt stress | 6.63E-04 |
| 26 | GO:0098656: anion transmembrane transport | 8.99E-04 |
| 27 | GO:0009245: lipid A biosynthetic process | 8.99E-04 |
| 28 | GO:0006432: phenylalanyl-tRNA aminoacylation | 1.05E-03 |
| 29 | GO:0080064: 4,4-dimethyl-9beta,19-cyclopropylsterol oxidation | 1.05E-03 |
| 30 | GO:0045905: positive regulation of translational termination | 1.05E-03 |
| 31 | GO:0071668: plant-type cell wall assembly | 1.05E-03 |
| 32 | GO:0034243: regulation of transcription elongation from RNA polymerase II promoter | 1.05E-03 |
| 33 | GO:0045901: positive regulation of translational elongation | 1.05E-03 |
| 34 | GO:0045041: protein import into mitochondrial intermembrane space | 1.05E-03 |
| 35 | GO:0006452: translational frameshifting | 1.05E-03 |
| 36 | GO:0010198: synergid death | 1.05E-03 |
| 37 | GO:0000387: spliceosomal snRNP assembly | 1.06E-03 |
| 38 | GO:0009793: embryo development ending in seed dormancy | 1.30E-03 |
| 39 | GO:0045793: positive regulation of cell size | 1.71E-03 |
| 40 | GO:0034227: tRNA thio-modification | 1.71E-03 |
| 41 | GO:0042256: mature ribosome assembly | 1.71E-03 |
| 42 | GO:0008216: spermidine metabolic process | 1.71E-03 |
| 43 | GO:0032786: positive regulation of DNA-templated transcription, elongation | 1.71E-03 |
| 44 | GO:0009558: embryo sac cellularization | 2.48E-03 |
| 45 | GO:0032877: positive regulation of DNA endoreduplication | 2.48E-03 |
| 46 | GO:0070301: cellular response to hydrogen peroxide | 2.48E-03 |
| 47 | GO:0051085: chaperone mediated protein folding requiring cofactor | 2.48E-03 |
| 48 | GO:0006107: oxaloacetate metabolic process | 2.48E-03 |
| 49 | GO:0043433: negative regulation of sequence-specific DNA binding transcription factor activity | 2.48E-03 |
| 50 | GO:0006164: purine nucleotide biosynthetic process | 2.48E-03 |
| 51 | GO:0030150: protein import into mitochondrial matrix | 2.90E-03 |
| 52 | GO:0009165: nucleotide biosynthetic process | 3.34E-03 |
| 53 | GO:1900864: mitochondrial RNA modification | 3.34E-03 |
| 54 | GO:0051781: positive regulation of cell division | 3.34E-03 |
| 55 | GO:0042274: ribosomal small subunit biogenesis | 3.34E-03 |
| 56 | GO:0032366: intracellular sterol transport | 3.34E-03 |
| 57 | GO:0061077: chaperone-mediated protein folding | 3.52E-03 |
| 58 | GO:0071493: cellular response to UV-B | 4.28E-03 |
| 59 | GO:0009965: leaf morphogenesis | 4.70E-03 |
| 60 | GO:0045040: protein import into mitochondrial outer membrane | 5.30E-03 |
| 61 | GO:0009409: response to cold | 5.68E-03 |
| 62 | GO:0000911: cytokinesis by cell plate formation | 6.40E-03 |
| 63 | GO:0042026: protein refolding | 6.40E-03 |
| 64 | GO:0006120: mitochondrial electron transport, NADH to ubiquinone | 6.40E-03 |
| 65 | GO:0000054: ribosomal subunit export from nucleus | 6.40E-03 |
| 66 | GO:0006458: 'de novo' protein folding | 6.40E-03 |
| 67 | GO:0080156: mitochondrial mRNA modification | 7.16E-03 |
| 68 | GO:0032880: regulation of protein localization | 7.57E-03 |
| 69 | GO:0006826: iron ion transport | 7.57E-03 |
| 70 | GO:0006122: mitochondrial electron transport, ubiquinol to cytochrome c | 7.57E-03 |
| 71 | GO:0050821: protein stabilization | 8.81E-03 |
| 72 | GO:0009231: riboflavin biosynthetic process | 8.81E-03 |
| 73 | GO:0006526: arginine biosynthetic process | 1.01E-02 |
| 74 | GO:0009808: lignin metabolic process | 1.01E-02 |
| 75 | GO:0006189: 'de novo' IMP biosynthetic process | 1.15E-02 |
| 76 | GO:0048589: developmental growth | 1.15E-02 |
| 77 | GO:0009060: aerobic respiration | 1.15E-02 |
| 78 | GO:0006325: chromatin organization | 1.45E-02 |
| 79 | GO:0010015: root morphogenesis | 1.60E-02 |
| 80 | GO:0006913: nucleocytoplasmic transport | 1.60E-02 |
| 81 | GO:0015770: sucrose transport | 1.60E-02 |
| 82 | GO:0006413: translational initiation | 1.71E-02 |
| 83 | GO:0016925: protein sumoylation | 1.76E-02 |
| 84 | GO:0010628: positive regulation of gene expression | 1.93E-02 |
| 85 | GO:0006108: malate metabolic process | 1.93E-02 |
| 86 | GO:0010102: lateral root morphogenesis | 1.93E-02 |
| 87 | GO:0006807: nitrogen compound metabolic process | 1.93E-02 |
| 88 | GO:0006446: regulation of translational initiation | 2.11E-02 |
| 89 | GO:0048467: gynoecium development | 2.11E-02 |
| 90 | GO:0010020: chloroplast fission | 2.11E-02 |
| 91 | GO:0008283: cell proliferation | 2.23E-02 |
| 92 | GO:0010039: response to iron ion | 2.28E-02 |
| 93 | GO:0009644: response to high light intensity | 2.42E-02 |
| 94 | GO:0006071: glycerol metabolic process | 2.47E-02 |
| 95 | GO:0006289: nucleotide-excision repair | 2.66E-02 |
| 96 | GO:0006487: protein N-linked glycosylation | 2.66E-02 |
| 97 | GO:0009116: nucleoside metabolic process | 2.66E-02 |
| 98 | GO:0003333: amino acid transmembrane transport | 3.05E-02 |
| 99 | GO:0015992: proton transport | 3.05E-02 |
| 100 | GO:0051260: protein homooligomerization | 3.05E-02 |
| 101 | GO:0010431: seed maturation | 3.05E-02 |
| 102 | GO:0007005: mitochondrion organization | 3.25E-02 |
| 103 | GO:0080092: regulation of pollen tube growth | 3.25E-02 |
| 104 | GO:0016226: iron-sulfur cluster assembly | 3.25E-02 |
| 105 | GO:0015031: protein transport | 3.33E-02 |
| 106 | GO:0040007: growth | 3.46E-02 |
| 107 | GO:0010089: xylem development | 3.67E-02 |
| 108 | GO:0006606: protein import into nucleus | 4.11E-02 |
| 109 | GO:0015991: ATP hydrolysis coupled proton transport | 4.11E-02 |
| 110 | GO:0006662: glycerol ether metabolic process | 4.33E-02 |
| 111 | GO:0010197: polar nucleus fusion | 4.33E-02 |
| 112 | GO:0015986: ATP synthesis coupled proton transport | 4.56E-02 |
| 113 | GO:0010183: pollen tube guidance | 4.80E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0004055: argininosuccinate synthase activity | 0.00E+00 |
| 2 | GO:0004056: argininosuccinate lyase activity | 0.00E+00 |
| 3 | GO:0050152: omega-amidase activity | 0.00E+00 |
| 4 | GO:0004641: phosphoribosylformylglycinamidine cyclo-ligase activity | 0.00E+00 |
| 5 | GO:0004746: riboflavin synthase activity | 0.00E+00 |
| 6 | GO:0003735: structural constituent of ribosome | 2.53E-163 |
| 7 | GO:0003729: mRNA binding | 1.16E-35 |
| 8 | GO:0019843: rRNA binding | 1.97E-10 |
| 9 | GO:0015288: porin activity | 2.62E-05 |
| 10 | GO:0008308: voltage-gated anion channel activity | 3.69E-05 |
| 11 | GO:0004550: nucleoside diphosphate kinase activity | 7.62E-05 |
| 12 | GO:0008097: 5S rRNA binding | 7.62E-05 |
| 13 | GO:0031177: phosphopantetheine binding | 2.88E-04 |
| 14 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 3.27E-04 |
| 15 | GO:0000035: acyl binding | 3.85E-04 |
| 16 | GO:0072549: monocoumaroyl dicaffeoyl spermidine meta-hydroxylase activity | 4.87E-04 |
| 17 | GO:0072548: dicoumaroyl monocaffeoyl spermidine meta-hydroxylase activity | 4.87E-04 |
| 18 | GO:0035614: snRNA stem-loop binding | 4.87E-04 |
| 19 | GO:0072547: tricoumaroylspermidine meta-hydroxylase activity | 4.87E-04 |
| 20 | GO:0008121: ubiquinol-cytochrome-c reductase activity | 4.95E-04 |
| 21 | GO:0043022: ribosome binding | 6.17E-04 |
| 22 | GO:0000036: ACP phosphopantetheine attachment site binding involved in fatty acid biosynthetic process | 6.17E-04 |
| 23 | GO:0030619: U1 snRNA binding | 1.05E-03 |
| 24 | GO:0047364: desulfoglucosinolate sulfotransferase activity | 1.05E-03 |
| 25 | GO:0015173: aromatic amino acid transmembrane transporter activity | 1.05E-03 |
| 26 | GO:0004826: phenylalanine-tRNA ligase activity | 1.05E-03 |
| 27 | GO:0003723: RNA binding | 1.06E-03 |
| 28 | GO:0044183: protein binding involved in protein folding | 1.42E-03 |
| 29 | GO:0070180: large ribosomal subunit rRNA binding | 1.71E-03 |
| 30 | GO:0070181: small ribosomal subunit rRNA binding | 1.71E-03 |
| 31 | GO:0015266: protein channel activity | 1.85E-03 |
| 32 | GO:0004749: ribose phosphate diphosphokinase activity | 2.48E-03 |
| 33 | GO:0000254: C-4 methylsterol oxidase activity | 2.48E-03 |
| 34 | GO:0050897: cobalt ion binding | 2.60E-03 |
| 35 | GO:0003746: translation elongation factor activity | 2.92E-03 |
| 36 | GO:0004576: oligosaccharyl transferase activity | 3.34E-03 |
| 37 | GO:0010011: auxin binding | 3.34E-03 |
| 38 | GO:0016820: hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances | 3.34E-03 |
| 39 | GO:0000993: RNA polymerase II core binding | 3.34E-03 |
| 40 | GO:0016810: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds | 3.34E-03 |
| 41 | GO:0005275: amine transmembrane transporter activity | 4.28E-03 |
| 42 | GO:0031386: protein tag | 4.28E-03 |
| 43 | GO:0004579: dolichyl-diphosphooligosaccharide-protein glycotransferase activity | 4.28E-03 |
| 44 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 4.93E-03 |
| 45 | GO:0046933: proton-transporting ATP synthase activity, rotational mechanism | 5.79E-03 |
| 46 | GO:0051920: peroxiredoxin activity | 6.40E-03 |
| 47 | GO:0042162: telomeric DNA binding | 7.57E-03 |
| 48 | GO:0016209: antioxidant activity | 8.81E-03 |
| 49 | GO:0051082: unfolded protein binding | 9.30E-03 |
| 50 | GO:0008889: glycerophosphodiester phosphodiesterase activity | 1.15E-02 |
| 51 | GO:0001055: RNA polymerase II activity | 1.29E-02 |
| 52 | GO:0008047: enzyme activator activity | 1.45E-02 |
| 53 | GO:0001054: RNA polymerase I activity | 1.60E-02 |
| 54 | GO:0004129: cytochrome-c oxidase activity | 1.60E-02 |
| 55 | GO:0008794: arsenate reductase (glutaredoxin) activity | 1.60E-02 |
| 56 | GO:0008515: sucrose transmembrane transporter activity | 1.60E-02 |
| 57 | GO:0005089: Rho guanyl-nucleotide exchange factor activity | 1.60E-02 |
| 58 | GO:0003697: single-stranded DNA binding | 1.73E-02 |
| 59 | GO:0001056: RNA polymerase III activity | 1.76E-02 |
| 60 | GO:0000049: tRNA binding | 1.76E-02 |
| 61 | GO:0031072: heat shock protein binding | 1.93E-02 |
| 62 | GO:0008146: sulfotransferase activity | 2.28E-02 |
| 63 | GO:0051119: sugar transmembrane transporter activity | 2.28E-02 |
| 64 | GO:0005528: FK506 binding | 2.66E-02 |
| 65 | GO:0051087: chaperone binding | 2.85E-02 |
| 66 | GO:0003727: single-stranded RNA binding | 3.67E-02 |
| 67 | GO:0047134: protein-disulfide reductase activity | 3.89E-02 |
| 68 | GO:0022857: transmembrane transporter activity | 4.03E-02 |
| 69 | GO:0015035: protein disulfide oxidoreductase activity | 4.40E-02 |
| 70 | GO:0004791: thioredoxin-disulfide reductase activity | 4.56E-02 |
| 71 | GO:0004872: receptor activity | 4.80E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0016469: proton-transporting two-sector ATPase complex | 0.00E+00 |
| 2 | GO:0043186: P granule | 0.00E+00 |
| 3 | GO:0005675: holo TFIIH complex | 0.00E+00 |
| 4 | GO:0005840: ribosome | 1.62E-120 |
| 5 | GO:0022625: cytosolic large ribosomal subunit | 1.40E-102 |
| 6 | GO:0022626: cytosolic ribosome | 1.69E-93 |
| 7 | GO:0022627: cytosolic small ribosomal subunit | 9.52E-61 |
| 8 | GO:0005829: cytosol | 3.93E-31 |
| 9 | GO:0005730: nucleolus | 8.25E-31 |
| 10 | GO:0005737: cytoplasm | 1.06E-26 |
| 11 | GO:0009506: plasmodesma | 4.86E-18 |
| 12 | GO:0005774: vacuolar membrane | 3.44E-17 |
| 13 | GO:0015934: large ribosomal subunit | 1.71E-13 |
| 14 | GO:0016020: membrane | 5.36E-12 |
| 15 | GO:0005773: vacuole | 6.26E-10 |
| 16 | GO:0015935: small ribosomal subunit | 9.85E-07 |
| 17 | GO:0005618: cell wall | 4.24E-06 |
| 18 | GO:0005758: mitochondrial intermembrane space | 1.80E-05 |
| 19 | GO:0046930: pore complex | 3.69E-05 |
| 20 | GO:0005742: mitochondrial outer membrane translocase complex | 3.69E-05 |
| 21 | GO:0009507: chloroplast | 4.04E-05 |
| 22 | GO:0005732: small nucleolar ribonucleoprotein complex | 6.80E-05 |
| 23 | GO:0005741: mitochondrial outer membrane | 3.90E-04 |
| 24 | GO:0005886: plasma membrane | 4.31E-04 |
| 25 | GO:0032044: DSIF complex | 4.87E-04 |
| 26 | GO:0030686: 90S preribosome | 4.87E-04 |
| 27 | GO:0009536: plastid | 5.70E-04 |
| 28 | GO:0005685: U1 snRNP | 8.99E-04 |
| 29 | GO:0035145: exon-exon junction complex | 1.05E-03 |
| 30 | GO:0005697: telomerase holoenzyme complex | 1.05E-03 |
| 31 | GO:0071011: precatalytic spliceosome | 1.06E-03 |
| 32 | GO:0071013: catalytic step 2 spliceosome | 1.42E-03 |
| 33 | GO:0048471: perinuclear region of cytoplasm | 1.42E-03 |
| 34 | GO:0034719: SMN-Sm protein complex | 1.71E-03 |
| 35 | GO:0005853: eukaryotic translation elongation factor 1 complex | 1.71E-03 |
| 36 | GO:0000439: core TFIIH complex | 1.71E-03 |
| 37 | GO:0019013: viral nucleocapsid | 1.85E-03 |
| 38 | GO:0005750: mitochondrial respiratory chain complex III | 2.09E-03 |
| 39 | GO:1990726: Lsm1-7-Pat1 complex | 2.48E-03 |
| 40 | GO:0070469: respiratory chain | 3.20E-03 |
| 41 | GO:0016471: vacuolar proton-transporting V-type ATPase complex | 3.34E-03 |
| 42 | GO:0000275: mitochondrial proton-transporting ATP synthase complex, catalytic core F(1) | 3.34E-03 |
| 43 | GO:0005682: U5 snRNP | 3.34E-03 |
| 44 | GO:0005687: U4 snRNP | 4.28E-03 |
| 45 | GO:0097526: spliceosomal tri-snRNP complex | 4.28E-03 |
| 46 | GO:0005746: mitochondrial respiratory chain | 4.28E-03 |
| 47 | GO:0008250: oligosaccharyltransferase complex | 4.28E-03 |
| 48 | GO:0005743: mitochondrial inner membrane | 5.49E-03 |
| 49 | GO:0005689: U12-type spliceosomal complex | 6.40E-03 |
| 50 | GO:0016272: prefoldin complex | 6.40E-03 |
| 51 | GO:0005762: mitochondrial large ribosomal subunit | 6.40E-03 |
| 52 | GO:0005681: spliceosomal complex | 7.34E-03 |
| 53 | GO:0071004: U2-type prespliceosome | 8.81E-03 |
| 54 | GO:0045273: respiratory chain complex II | 8.81E-03 |
| 55 | GO:0005749: mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone) | 8.81E-03 |
| 56 | GO:0005688: U6 snRNP | 8.81E-03 |
| 57 | GO:0009706: chloroplast inner membrane | 9.30E-03 |
| 58 | GO:0046540: U4/U6 x U5 tri-snRNP complex | 1.01E-02 |
| 59 | GO:0005788: endoplasmic reticulum lumen | 1.10E-02 |
| 60 | GO:0005736: DNA-directed RNA polymerase I complex | 1.15E-02 |
| 61 | GO:0005666: DNA-directed RNA polymerase III complex | 1.29E-02 |
| 62 | GO:0015030: Cajal body | 1.29E-02 |
| 63 | GO:0005686: U2 snRNP | 1.45E-02 |
| 64 | GO:0000418: DNA-directed RNA polymerase IV complex | 1.45E-02 |
| 65 | GO:0005852: eukaryotic translation initiation factor 3 complex | 1.60E-02 |
| 66 | GO:0005759: mitochondrial matrix | 1.66E-02 |
| 67 | GO:0031307: integral component of mitochondrial outer membrane | 1.76E-02 |
| 68 | GO:0005739: mitochondrion | 1.76E-02 |
| 69 | GO:0005665: DNA-directed RNA polymerase II, core complex | 1.76E-02 |
| 70 | GO:0009508: plastid chromosome | 1.93E-02 |
| 71 | GO:0005753: mitochondrial proton-transporting ATP synthase complex | 2.28E-02 |
| 72 | GO:0000419: DNA-directed RNA polymerase V complex | 2.47E-02 |
| 73 | GO:0005622: intracellular | 4.41E-02 |