GO Enrichment Analysis of Co-expressed Genes with
AT2G42530
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009667: plastid inner membrane organization | 0.00E+00 |
| 2 | GO:1904526: regulation of microtubule binding | 0.00E+00 |
| 3 | GO:0009631: cold acclimation | 3.16E-10 |
| 4 | GO:0009409: response to cold | 1.25E-06 |
| 5 | GO:0009737: response to abscisic acid | 8.78E-06 |
| 6 | GO:0010025: wax biosynthetic process | 2.01E-05 |
| 7 | GO:0070417: cellular response to cold | 5.70E-05 |
| 8 | GO:0042335: cuticle development | 6.44E-05 |
| 9 | GO:0000302: response to reactive oxygen species | 9.94E-05 |
| 10 | GO:0009415: response to water | 1.06E-04 |
| 11 | GO:0071588: hydrogen peroxide mediated signaling pathway | 1.50E-04 |
| 12 | GO:0009609: response to symbiotic bacterium | 1.50E-04 |
| 13 | GO:0015812: gamma-aminobutyric acid transport | 1.50E-04 |
| 14 | GO:0080051: cutin transport | 1.50E-04 |
| 15 | GO:0000038: very long-chain fatty acid metabolic process | 2.70E-04 |
| 16 | GO:0005983: starch catabolic process | 3.11E-04 |
| 17 | GO:0015709: thiosulfate transport | 3.42E-04 |
| 18 | GO:0071422: succinate transmembrane transport | 3.42E-04 |
| 19 | GO:0071712: ER-associated misfolded protein catabolic process | 3.42E-04 |
| 20 | GO:0032527: protein exit from endoplasmic reticulum | 3.42E-04 |
| 21 | GO:0015908: fatty acid transport | 3.42E-04 |
| 22 | GO:0046168: glycerol-3-phosphate catabolic process | 5.61E-04 |
| 23 | GO:0032940: secretion by cell | 5.61E-04 |
| 24 | GO:0009414: response to water deprivation | 6.85E-04 |
| 25 | GO:0006970: response to osmotic stress | 7.06E-04 |
| 26 | GO:0009413: response to flooding | 8.03E-04 |
| 27 | GO:0051259: protein oligomerization | 8.03E-04 |
| 28 | GO:1901000: regulation of response to salt stress | 8.03E-04 |
| 29 | GO:0015729: oxaloacetate transport | 8.03E-04 |
| 30 | GO:0006072: glycerol-3-phosphate metabolic process | 8.03E-04 |
| 31 | GO:0030100: regulation of endocytosis | 8.03E-04 |
| 32 | GO:0042631: cellular response to water deprivation | 9.99E-04 |
| 33 | GO:0010222: stem vascular tissue pattern formation | 1.06E-03 |
| 34 | GO:0045727: positive regulation of translation | 1.06E-03 |
| 35 | GO:0022622: root system development | 1.06E-03 |
| 36 | GO:1901409: positive regulation of phosphorylation of RNA polymerase II C-terminal domain | 1.06E-03 |
| 37 | GO:0006552: leucine catabolic process | 1.06E-03 |
| 38 | GO:0071585: detoxification of cadmium ion | 1.06E-03 |
| 39 | GO:0048868: pollen tube development | 1.07E-03 |
| 40 | GO:0006461: protein complex assembly | 1.35E-03 |
| 41 | GO:0071423: malate transmembrane transport | 1.35E-03 |
| 42 | GO:0005975: carbohydrate metabolic process | 1.63E-03 |
| 43 | GO:0035435: phosphate ion transmembrane transport | 1.65E-03 |
| 44 | GO:1900425: negative regulation of defense response to bacterium | 1.65E-03 |
| 45 | GO:0006574: valine catabolic process | 1.65E-03 |
| 46 | GO:0010286: heat acclimation | 1.68E-03 |
| 47 | GO:0006633: fatty acid biosynthetic process | 1.86E-03 |
| 48 | GO:0010019: chloroplast-nucleus signaling pathway | 1.98E-03 |
| 49 | GO:0010555: response to mannitol | 1.98E-03 |
| 50 | GO:0071470: cellular response to osmotic stress | 1.98E-03 |
| 51 | GO:0045737: positive regulation of cyclin-dependent protein serine/threonine kinase activity | 1.98E-03 |
| 52 | GO:0045926: negative regulation of growth | 1.98E-03 |
| 53 | GO:0009082: branched-chain amino acid biosynthetic process | 1.98E-03 |
| 54 | GO:0000462: maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 1.98E-03 |
| 55 | GO:0006974: cellular response to DNA damage stimulus | 2.10E-03 |
| 56 | GO:0007623: circadian rhythm | 2.10E-03 |
| 57 | GO:1902074: response to salt | 2.33E-03 |
| 58 | GO:0032880: regulation of protein localization | 2.33E-03 |
| 59 | GO:0009610: response to symbiotic fungus | 2.33E-03 |
| 60 | GO:0030497: fatty acid elongation | 2.33E-03 |
| 61 | GO:0008272: sulfate transport | 2.33E-03 |
| 62 | GO:0050821: protein stabilization | 2.70E-03 |
| 63 | GO:0019827: stem cell population maintenance | 2.70E-03 |
| 64 | GO:0008610: lipid biosynthetic process | 2.70E-03 |
| 65 | GO:0009787: regulation of abscisic acid-activated signaling pathway | 2.70E-03 |
| 66 | GO:0009819: drought recovery | 2.70E-03 |
| 67 | GO:0051276: chromosome organization | 2.70E-03 |
| 68 | GO:0032544: plastid translation | 3.08E-03 |
| 69 | GO:0009735: response to cytokinin | 3.26E-03 |
| 70 | GO:0010345: suberin biosynthetic process | 3.49E-03 |
| 71 | GO:0006631: fatty acid metabolic process | 3.67E-03 |
| 72 | GO:0009611: response to wounding | 3.86E-03 |
| 73 | GO:0042761: very long-chain fatty acid biosynthetic process | 3.91E-03 |
| 74 | GO:2000280: regulation of root development | 3.91E-03 |
| 75 | GO:0009644: response to high light intensity | 4.30E-03 |
| 76 | GO:0042538: hyperosmotic salinity response | 4.99E-03 |
| 77 | GO:0016024: CDP-diacylglycerol biosynthetic process | 5.27E-03 |
| 78 | GO:0045037: protein import into chloroplast stroma | 5.27E-03 |
| 79 | GO:0050826: response to freezing | 5.75E-03 |
| 80 | GO:0010588: cotyledon vascular tissue pattern formation | 5.75E-03 |
| 81 | GO:2000012: regulation of auxin polar transport | 5.75E-03 |
| 82 | GO:0010143: cutin biosynthetic process | 6.25E-03 |
| 83 | GO:0043086: negative regulation of catalytic activity | 6.32E-03 |
| 84 | GO:0016042: lipid catabolic process | 7.58E-03 |
| 85 | GO:0009651: response to salt stress | 7.77E-03 |
| 86 | GO:0030150: protein import into mitochondrial matrix | 7.84E-03 |
| 87 | GO:0051017: actin filament bundle assembly | 7.84E-03 |
| 88 | GO:0007017: microtubule-based process | 8.40E-03 |
| 89 | GO:0051260: protein homooligomerization | 8.97E-03 |
| 90 | GO:0009269: response to desiccation | 8.97E-03 |
| 91 | GO:0003333: amino acid transmembrane transport | 8.97E-03 |
| 92 | GO:0016998: cell wall macromolecule catabolic process | 8.97E-03 |
| 93 | GO:0010017: red or far-red light signaling pathway | 9.56E-03 |
| 94 | GO:0001944: vasculature development | 1.02E-02 |
| 95 | GO:0009831: plant-type cell wall modification involved in multidimensional cell growth | 1.02E-02 |
| 96 | GO:0071215: cellular response to abscisic acid stimulus | 1.02E-02 |
| 97 | GO:0019722: calcium-mediated signaling | 1.08E-02 |
| 98 | GO:0071555: cell wall organization | 1.09E-02 |
| 99 | GO:0008284: positive regulation of cell proliferation | 1.14E-02 |
| 100 | GO:0000413: protein peptidyl-prolyl isomerization | 1.20E-02 |
| 101 | GO:0009958: positive gravitropism | 1.27E-02 |
| 102 | GO:0010150: leaf senescence | 1.32E-02 |
| 103 | GO:0009749: response to glucose | 1.41E-02 |
| 104 | GO:0019252: starch biosynthetic process | 1.41E-02 |
| 105 | GO:0010583: response to cyclopentenone | 1.55E-02 |
| 106 | GO:0010090: trichome morphogenesis | 1.62E-02 |
| 107 | GO:0009416: response to light stimulus | 1.63E-02 |
| 108 | GO:0009828: plant-type cell wall loosening | 1.69E-02 |
| 109 | GO:0006310: DNA recombination | 1.69E-02 |
| 110 | GO:0019760: glucosinolate metabolic process | 1.69E-02 |
| 111 | GO:0007267: cell-cell signaling | 1.76E-02 |
| 112 | GO:0010411: xyloglucan metabolic process | 2.15E-02 |
| 113 | GO:0000160: phosphorelay signal transduction system | 2.40E-02 |
| 114 | GO:0006811: ion transport | 2.48E-02 |
| 115 | GO:0048527: lateral root development | 2.56E-02 |
| 116 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 2.63E-02 |
| 117 | GO:0010200: response to chitin | 2.63E-02 |
| 118 | GO:0000724: double-strand break repair via homologous recombination | 2.65E-02 |
| 119 | GO:0016051: carbohydrate biosynthetic process | 2.74E-02 |
| 120 | GO:0034599: cellular response to oxidative stress | 2.83E-02 |
| 121 | GO:0006839: mitochondrial transport | 3.00E-02 |
| 122 | GO:0009744: response to sucrose | 3.28E-02 |
| 123 | GO:0006869: lipid transport | 3.33E-02 |
| 124 | GO:0000209: protein polyubiquitination | 3.37E-02 |
| 125 | GO:0042546: cell wall biogenesis | 3.37E-02 |
| 126 | GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process | 3.76E-02 |
| 127 | GO:0006260: DNA replication | 3.76E-02 |
| 128 | GO:0009664: plant-type cell wall organization | 3.85E-02 |
| 129 | GO:0009809: lignin biosynthetic process | 4.05E-02 |
| 130 | GO:0006364: rRNA processing | 4.05E-02 |
| 131 | GO:0009736: cytokinin-activated signaling pathway | 4.05E-02 |
| 132 | GO:0008152: metabolic process | 4.12E-02 |
| 133 | GO:0006857: oligopeptide transport | 4.26E-02 |
| 134 | GO:0048367: shoot system development | 4.67E-02 |
| 135 | GO:0009873: ethylene-activated signaling pathway | 4.81E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0010303: limit dextrinase activity | 0.00E+00 |
| 2 | GO:0047538: 2-carboxy-D-arabinitol-1-phosphatase activity | 0.00E+00 |
| 3 | GO:0051060: pullulanase activity | 0.00E+00 |
| 4 | GO:0009922: fatty acid elongase activity | 1.61E-07 |
| 5 | GO:0070330: aromatase activity | 4.13E-06 |
| 6 | GO:0102336: 3-oxo-arachidoyl-CoA synthase activity | 2.01E-05 |
| 7 | GO:0102337: 3-oxo-cerotoyl-CoA synthase activity | 2.01E-05 |
| 8 | GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity | 2.01E-05 |
| 9 | GO:0018685: alkane 1-monooxygenase activity | 2.93E-05 |
| 10 | GO:0004556: alpha-amylase activity | 4.37E-05 |
| 11 | GO:0005534: galactose binding | 1.50E-04 |
| 12 | GO:0015185: gamma-aminobutyric acid transmembrane transporter activity | 1.50E-04 |
| 13 | GO:0015245: fatty acid transporter activity | 1.50E-04 |
| 14 | GO:0044390: ubiquitin-like protein conjugating enzyme binding | 3.42E-04 |
| 15 | GO:0015117: thiosulfate transmembrane transporter activity | 3.42E-04 |
| 16 | GO:1901677: phosphate transmembrane transporter activity | 3.42E-04 |
| 17 | GO:0015180: L-alanine transmembrane transporter activity | 3.42E-04 |
| 18 | GO:0004367: glycerol-3-phosphate dehydrogenase [NAD+] activity | 5.61E-04 |
| 19 | GO:0005310: dicarboxylic acid transmembrane transporter activity | 5.61E-04 |
| 20 | GO:0015141: succinate transmembrane transporter activity | 5.61E-04 |
| 21 | GO:0052654: L-leucine transaminase activity | 8.03E-04 |
| 22 | GO:0052655: L-valine transaminase activity | 8.03E-04 |
| 23 | GO:0015189: L-lysine transmembrane transporter activity | 8.03E-04 |
| 24 | GO:0015181: arginine transmembrane transporter activity | 8.03E-04 |
| 25 | GO:0015131: oxaloacetate transmembrane transporter activity | 8.03E-04 |
| 26 | GO:0052656: L-isoleucine transaminase activity | 8.03E-04 |
| 27 | GO:1904264: ubiquitin protein ligase activity involved in ERAD pathway | 1.06E-03 |
| 28 | GO:0005313: L-glutamate transmembrane transporter activity | 1.06E-03 |
| 29 | GO:0004084: branched-chain-amino-acid transaminase activity | 1.06E-03 |
| 30 | GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity | 1.65E-03 |
| 31 | GO:0043140: ATP-dependent 3'-5' DNA helicase activity | 1.65E-03 |
| 32 | GO:0004130: cytochrome-c peroxidase activity | 1.65E-03 |
| 33 | GO:0004366: glycerol-3-phosphate O-acyltransferase activity | 1.65E-03 |
| 34 | GO:0016688: L-ascorbate peroxidase activity | 1.65E-03 |
| 35 | GO:0009378: four-way junction helicase activity | 1.65E-03 |
| 36 | GO:0043138: 3'-5' DNA helicase activity | 1.98E-03 |
| 37 | GO:0015140: malate transmembrane transporter activity | 2.33E-03 |
| 38 | GO:0004620: phospholipase activity | 2.33E-03 |
| 39 | GO:0015288: porin activity | 2.70E-03 |
| 40 | GO:0052747: sinapyl alcohol dehydrogenase activity | 2.70E-03 |
| 41 | GO:0016788: hydrolase activity, acting on ester bonds | 3.74E-03 |
| 42 | GO:0015020: glucuronosyltransferase activity | 4.35E-03 |
| 43 | GO:0004864: protein phosphatase inhibitor activity | 4.35E-03 |
| 44 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 4.64E-03 |
| 45 | GO:0045551: cinnamyl-alcohol dehydrogenase activity | 5.27E-03 |
| 46 | GO:0015116: sulfate transmembrane transporter activity | 5.27E-03 |
| 47 | GO:0052689: carboxylic ester hydrolase activity | 5.44E-03 |
| 48 | GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds | 5.70E-03 |
| 49 | GO:0015266: protein channel activity | 5.75E-03 |
| 50 | GO:0015171: amino acid transmembrane transporter activity | 5.92E-03 |
| 51 | GO:0008266: poly(U) RNA binding | 6.25E-03 |
| 52 | GO:0008083: growth factor activity | 6.25E-03 |
| 53 | GO:0042973: glucan endo-1,3-beta-D-glucosidase activity | 6.25E-03 |
| 54 | GO:0005528: FK506 binding | 7.84E-03 |
| 55 | GO:0016746: transferase activity, transferring acyl groups | 7.84E-03 |
| 56 | GO:0019843: rRNA binding | 9.54E-03 |
| 57 | GO:0018024: histone-lysine N-methyltransferase activity | 1.14E-02 |
| 58 | GO:0046910: pectinesterase inhibitor activity | 1.23E-02 |
| 59 | GO:0015297: antiporter activity | 1.26E-02 |
| 60 | GO:0016538: cyclin-dependent protein serine/threonine kinase regulator activity | 1.27E-02 |
| 61 | GO:0050662: coenzyme binding | 1.34E-02 |
| 62 | GO:0016762: xyloglucan:xyloglucosyl transferase activity | 1.47E-02 |
| 63 | GO:0051015: actin filament binding | 1.62E-02 |
| 64 | GO:0000156: phosphorelay response regulator activity | 1.62E-02 |
| 65 | GO:0042626: ATPase activity, coupled to transmembrane movement of substances | 1.68E-02 |
| 66 | GO:0016791: phosphatase activity | 1.69E-02 |
| 67 | GO:0005200: structural constituent of cytoskeleton | 1.76E-02 |
| 68 | GO:0008375: acetylglucosaminyltransferase activity | 2.07E-02 |
| 69 | GO:0016798: hydrolase activity, acting on glycosyl bonds | 2.15E-02 |
| 70 | GO:0008757: S-adenosylmethionine-dependent methyltransferase activity | 2.23E-02 |
| 71 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 2.31E-02 |
| 72 | GO:0005096: GTPase activator activity | 2.40E-02 |
| 73 | GO:0004693: cyclin-dependent protein serine/threonine kinase activity | 2.48E-02 |
| 74 | GO:0061630: ubiquitin protein ligase activity | 2.67E-02 |
| 75 | GO:0003993: acid phosphatase activity | 2.83E-02 |
| 76 | GO:0042803: protein homodimerization activity | 3.18E-02 |
| 77 | GO:0005198: structural molecule activity | 3.56E-02 |
| 78 | GO:0003924: GTPase activity | 3.74E-02 |
| 79 | GO:0051287: NAD binding | 3.76E-02 |
| 80 | GO:0031625: ubiquitin protein ligase binding | 4.36E-02 |
| 81 | GO:0045330: aspartyl esterase activity | 4.36E-02 |
| 82 | GO:0003824: catalytic activity | 4.41E-02 |
| 83 | GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups | 4.67E-02 |
| 84 | GO:0030599: pectinesterase activity | 4.99E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0034426: etioplast membrane | 0.00E+00 |
| 2 | GO:0031357: integral component of chloroplast inner membrane | 1.11E-06 |
| 3 | GO:0016020: membrane | 1.43E-04 |
| 4 | GO:0009941: chloroplast envelope | 1.66E-04 |
| 5 | GO:0009534: chloroplast thylakoid | 2.47E-04 |
| 6 | GO:0046658: anchored component of plasma membrane | 4.97E-04 |
| 7 | GO:0009897: external side of plasma membrane | 5.61E-04 |
| 8 | GO:0036513: Derlin-1 retrotranslocation complex | 8.03E-04 |
| 9 | GO:0009331: glycerol-3-phosphate dehydrogenase complex | 8.03E-04 |
| 10 | GO:0009527: plastid outer membrane | 1.06E-03 |
| 11 | GO:0009579: thylakoid | 1.13E-03 |
| 12 | GO:0005618: cell wall | 1.16E-03 |
| 13 | GO:0009570: chloroplast stroma | 1.35E-03 |
| 14 | GO:0005694: chromosome | 1.40E-03 |
| 15 | GO:0005798: Golgi-associated vesicle | 1.65E-03 |
| 16 | GO:0031305: integral component of mitochondrial inner membrane | 2.70E-03 |
| 17 | GO:0046930: pore complex | 3.08E-03 |
| 18 | GO:0000307: cyclin-dependent protein kinase holoenzyme complex | 3.08E-03 |
| 19 | GO:0045298: tubulin complex | 3.49E-03 |
| 20 | GO:0031977: thylakoid lumen | 3.67E-03 |
| 21 | GO:0009505: plant-type cell wall | 4.22E-03 |
| 22 | GO:0000312: plastid small ribosomal subunit | 6.25E-03 |
| 23 | GO:0005875: microtubule associated complex | 7.30E-03 |
| 24 | GO:0005769: early endosome | 7.30E-03 |
| 25 | GO:0031225: anchored component of membrane | 7.34E-03 |
| 26 | GO:0010287: plastoglobule | 9.03E-03 |
| 27 | GO:0048046: apoplast | 9.08E-03 |
| 28 | GO:0009543: chloroplast thylakoid lumen | 9.54E-03 |
| 29 | GO:0015629: actin cytoskeleton | 1.02E-02 |
| 30 | GO:0005744: mitochondrial inner membrane presequence translocase complex | 1.08E-02 |
| 31 | GO:0005576: extracellular region | 1.11E-02 |
| 32 | GO:0009535: chloroplast thylakoid membrane | 1.16E-02 |
| 33 | GO:0016021: integral component of membrane | 1.43E-02 |
| 34 | GO:0009707: chloroplast outer membrane | 2.31E-02 |
| 35 | GO:0005783: endoplasmic reticulum | 3.14E-02 |
| 36 | GO:0005856: cytoskeleton | 3.56E-02 |
| 37 | GO:0031966: mitochondrial membrane | 3.85E-02 |
| 38 | GO:0009506: plasmodesma | 4.47E-02 |