GO Enrichment Analysis of Co-expressed Genes with
AT2G42130
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:1905421: regulation of plant organ morphogenesis | 0.00E+00 |
| 2 | GO:0002184: cytoplasmic translational termination | 0.00E+00 |
| 3 | GO:0030155: regulation of cell adhesion | 0.00E+00 |
| 4 | GO:0061635: regulation of protein complex stability | 0.00E+00 |
| 5 | GO:0006428: isoleucyl-tRNA aminoacylation | 0.00E+00 |
| 6 | GO:2000042: negative regulation of double-strand break repair via homologous recombination | 0.00E+00 |
| 7 | GO:0005996: monosaccharide metabolic process | 0.00E+00 |
| 8 | GO:0018023: peptidyl-lysine trimethylation | 0.00E+00 |
| 9 | GO:0016553: base conversion or substitution editing | 0.00E+00 |
| 10 | GO:0006412: translation | 1.77E-15 |
| 11 | GO:0032544: plastid translation | 1.08E-14 |
| 12 | GO:0015979: photosynthesis | 5.79E-14 |
| 13 | GO:0042254: ribosome biogenesis | 8.70E-11 |
| 14 | GO:0010027: thylakoid membrane organization | 1.10E-09 |
| 15 | GO:0009735: response to cytokinin | 1.97E-09 |
| 16 | GO:0009773: photosynthetic electron transport in photosystem I | 5.01E-09 |
| 17 | GO:0009658: chloroplast organization | 4.70E-07 |
| 18 | GO:0009409: response to cold | 7.84E-07 |
| 19 | GO:0015995: chlorophyll biosynthetic process | 2.51E-06 |
| 20 | GO:0030388: fructose 1,6-bisphosphate metabolic process | 3.07E-06 |
| 21 | GO:0010206: photosystem II repair | 1.09E-05 |
| 22 | GO:0006000: fructose metabolic process | 1.11E-05 |
| 23 | GO:0019464: glycine decarboxylation via glycine cleavage system | 4.54E-05 |
| 24 | GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway | 1.05E-04 |
| 25 | GO:0010196: nonphotochemical quenching | 1.90E-04 |
| 26 | GO:0005978: glycogen biosynthetic process | 2.41E-04 |
| 27 | GO:0080093: regulation of photorespiration | 2.57E-04 |
| 28 | GO:0043007: maintenance of rDNA | 2.57E-04 |
| 29 | GO:0031998: regulation of fatty acid beta-oxidation | 2.57E-04 |
| 30 | GO:1902458: positive regulation of stomatal opening | 2.57E-04 |
| 31 | GO:0019294: keto-3-deoxy-D-manno-octulosonic acid biosynthetic process | 2.57E-04 |
| 32 | GO:0043489: RNA stabilization | 2.57E-04 |
| 33 | GO:0006002: fructose 6-phosphate metabolic process | 2.98E-04 |
| 34 | GO:0006782: protoporphyrinogen IX biosynthetic process | 4.99E-04 |
| 35 | GO:0018026: peptidyl-lysine monomethylation | 5.68E-04 |
| 36 | GO:1903426: regulation of reactive oxygen species biosynthetic process | 5.68E-04 |
| 37 | GO:0019388: galactose catabolic process | 5.68E-04 |
| 38 | GO:0043085: positive regulation of catalytic activity | 5.76E-04 |
| 39 | GO:0006094: gluconeogenesis | 7.47E-04 |
| 40 | GO:0009767: photosynthetic electron transport chain | 7.47E-04 |
| 41 | GO:0005986: sucrose biosynthetic process | 7.47E-04 |
| 42 | GO:0016050: vesicle organization | 9.22E-04 |
| 43 | GO:0048281: inflorescence morphogenesis | 9.22E-04 |
| 44 | GO:0006518: peptide metabolic process | 9.22E-04 |
| 45 | GO:0034599: cellular response to oxidative stress | 9.43E-04 |
| 46 | GO:0042742: defense response to bacterium | 9.80E-04 |
| 47 | GO:0009590: detection of gravity | 1.32E-03 |
| 48 | GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly | 1.32E-03 |
| 49 | GO:0051085: chaperone mediated protein folding requiring cofactor | 1.32E-03 |
| 50 | GO:0006241: CTP biosynthetic process | 1.32E-03 |
| 51 | GO:0006165: nucleoside diphosphate phosphorylation | 1.32E-03 |
| 52 | GO:0006228: UTP biosynthetic process | 1.32E-03 |
| 53 | GO:0010148: transpiration | 1.32E-03 |
| 54 | GO:0010306: rhamnogalacturonan II biosynthetic process | 1.32E-03 |
| 55 | GO:0010731: protein glutathionylation | 1.32E-03 |
| 56 | GO:0061077: chaperone-mediated protein folding | 1.39E-03 |
| 57 | GO:0010021: amylopectin biosynthetic process | 1.76E-03 |
| 58 | GO:0010037: response to carbon dioxide | 1.76E-03 |
| 59 | GO:0006808: regulation of nitrogen utilization | 1.76E-03 |
| 60 | GO:0015976: carbon utilization | 1.76E-03 |
| 61 | GO:0006109: regulation of carbohydrate metabolic process | 1.76E-03 |
| 62 | GO:0006183: GTP biosynthetic process | 1.76E-03 |
| 63 | GO:0045727: positive regulation of translation | 1.76E-03 |
| 64 | GO:2000122: negative regulation of stomatal complex development | 1.76E-03 |
| 65 | GO:0006546: glycine catabolic process | 1.76E-03 |
| 66 | GO:0045038: protein import into chloroplast thylakoid membrane | 2.25E-03 |
| 67 | GO:0006097: glyoxylate cycle | 2.25E-03 |
| 68 | GO:0006461: protein complex assembly | 2.25E-03 |
| 69 | GO:0000304: response to singlet oxygen | 2.25E-03 |
| 70 | GO:0006662: glycerol ether metabolic process | 2.26E-03 |
| 71 | GO:0006810: transport | 2.27E-03 |
| 72 | GO:0019252: starch biosynthetic process | 2.61E-03 |
| 73 | GO:0042549: photosystem II stabilization | 2.77E-03 |
| 74 | GO:0000470: maturation of LSU-rRNA | 2.77E-03 |
| 75 | GO:0010190: cytochrome b6f complex assembly | 2.77E-03 |
| 76 | GO:0009955: adaxial/abaxial pattern specification | 3.33E-03 |
| 77 | GO:0042026: protein refolding | 3.33E-03 |
| 78 | GO:1901259: chloroplast rRNA processing | 3.33E-03 |
| 79 | GO:0045454: cell redox homeostasis | 3.69E-03 |
| 80 | GO:0010103: stomatal complex morphogenesis | 3.93E-03 |
| 81 | GO:0070370: cellular heat acclimation | 3.93E-03 |
| 82 | GO:0009645: response to low light intensity stimulus | 3.93E-03 |
| 83 | GO:0009790: embryo development | 4.52E-03 |
| 84 | GO:2000070: regulation of response to water deprivation | 4.56E-03 |
| 85 | GO:0015996: chlorophyll catabolic process | 5.22E-03 |
| 86 | GO:0007186: G-protein coupled receptor signaling pathway | 5.22E-03 |
| 87 | GO:0001558: regulation of cell growth | 5.22E-03 |
| 88 | GO:0009657: plastid organization | 5.22E-03 |
| 89 | GO:0009817: defense response to fungus, incompatible interaction | 5.25E-03 |
| 90 | GO:0006783: heme biosynthetic process | 5.92E-03 |
| 91 | GO:0005982: starch metabolic process | 6.64E-03 |
| 92 | GO:0006779: porphyrin-containing compound biosynthetic process | 6.64E-03 |
| 93 | GO:0000272: polysaccharide catabolic process | 8.19E-03 |
| 94 | GO:0009750: response to fructose | 8.19E-03 |
| 95 | GO:0018119: peptidyl-cysteine S-nitrosylation | 8.19E-03 |
| 96 | GO:0019684: photosynthesis, light reaction | 8.19E-03 |
| 97 | GO:0006415: translational termination | 8.19E-03 |
| 98 | GO:0009089: lysine biosynthetic process via diaminopimelate | 8.19E-03 |
| 99 | GO:0009073: aromatic amino acid family biosynthetic process | 8.19E-03 |
| 100 | GO:0055114: oxidation-reduction process | 8.98E-03 |
| 101 | GO:0005983: starch catabolic process | 9.00E-03 |
| 102 | GO:0045037: protein import into chloroplast stroma | 9.00E-03 |
| 103 | GO:0006108: malate metabolic process | 9.85E-03 |
| 104 | GO:0006006: glucose metabolic process | 9.85E-03 |
| 105 | GO:0010102: lateral root morphogenesis | 9.85E-03 |
| 106 | GO:0010020: chloroplast fission | 1.07E-02 |
| 107 | GO:0010207: photosystem II assembly | 1.07E-02 |
| 108 | GO:0019253: reductive pentose-phosphate cycle | 1.07E-02 |
| 109 | GO:0005985: sucrose metabolic process | 1.16E-02 |
| 110 | GO:0006364: rRNA processing | 1.16E-02 |
| 111 | GO:0006289: nucleotide-excision repair | 1.35E-02 |
| 112 | GO:0000027: ribosomal large subunit assembly | 1.35E-02 |
| 113 | GO:0009944: polarity specification of adaxial/abaxial axis | 1.35E-02 |
| 114 | GO:0009768: photosynthesis, light harvesting in photosystem I | 1.45E-02 |
| 115 | GO:0051302: regulation of cell division | 1.45E-02 |
| 116 | GO:0006418: tRNA aminoacylation for protein translation | 1.45E-02 |
| 117 | GO:0007017: microtubule-based process | 1.45E-02 |
| 118 | GO:0031408: oxylipin biosynthetic process | 1.55E-02 |
| 119 | GO:0016114: terpenoid biosynthetic process | 1.55E-02 |
| 120 | GO:0007005: mitochondrion organization | 1.65E-02 |
| 121 | GO:0009411: response to UV | 1.76E-02 |
| 122 | GO:0001944: vasculature development | 1.76E-02 |
| 123 | GO:0009686: gibberellin biosynthetic process | 1.76E-02 |
| 124 | GO:0009561: megagametogenesis | 1.86E-02 |
| 125 | GO:0042631: cellular response to water deprivation | 2.09E-02 |
| 126 | GO:0010182: sugar mediated signaling pathway | 2.20E-02 |
| 127 | GO:0048868: pollen tube development | 2.20E-02 |
| 128 | GO:0000302: response to reactive oxygen species | 2.56E-02 |
| 129 | GO:0030163: protein catabolic process | 2.80E-02 |
| 130 | GO:0006979: response to oxidative stress | 3.49E-02 |
| 131 | GO:0009627: systemic acquired resistance | 3.59E-02 |
| 132 | GO:0016311: dephosphorylation | 3.87E-02 |
| 133 | GO:0018298: protein-chromophore linkage | 4.01E-02 |
| 134 | GO:0008219: cell death | 4.01E-02 |
| 135 | GO:0048481: plant ovule development | 4.01E-02 |
| 136 | GO:0009813: flavonoid biosynthetic process | 4.16E-02 |
| 137 | GO:0006499: N-terminal protein myristoylation | 4.30E-02 |
| 138 | GO:0009631: cold acclimation | 4.45E-02 |
| 139 | GO:0010119: regulation of stomatal movement | 4.45E-02 |
| 140 | GO:0009793: embryo development ending in seed dormancy | 4.53E-02 |
| 141 | GO:0009853: photorespiration | 4.75E-02 |
| 142 | GO:0045087: innate immune response | 4.75E-02 |
| 143 | GO:0006099: tricarboxylic acid cycle | 4.90E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009899: ent-kaurene synthase activity | 0.00E+00 |
| 2 | GO:0102193: protein-ribulosamine 3-kinase activity | 0.00E+00 |
| 3 | GO:0051738: xanthophyll binding | 0.00E+00 |
| 4 | GO:0033728: divinyl chlorophyllide a 8-vinyl-reductase activity | 0.00E+00 |
| 5 | GO:0050515: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity | 0.00E+00 |
| 6 | GO:0047538: 2-carboxy-D-arabinitol-1-phosphatase activity | 0.00E+00 |
| 7 | GO:0050518: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity | 0.00E+00 |
| 8 | GO:0051744: 3,8-divinyl protochlorophyllide a 8-vinyl reductase activity | 0.00E+00 |
| 9 | GO:0004822: isoleucine-tRNA ligase activity | 0.00E+00 |
| 10 | GO:0019843: rRNA binding | 3.45E-24 |
| 11 | GO:0003735: structural constituent of ribosome | 5.29E-18 |
| 12 | GO:0005528: FK506 binding | 4.40E-08 |
| 13 | GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity | 3.07E-06 |
| 14 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 1.70E-05 |
| 15 | GO:0004375: glycine dehydrogenase (decarboxylating) activity | 2.51E-05 |
| 16 | GO:0051920: peroxiredoxin activity | 1.45E-04 |
| 17 | GO:0016209: antioxidant activity | 2.41E-04 |
| 18 | GO:0030785: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity | 2.57E-04 |
| 19 | GO:0042286: glutamate-1-semialdehyde 2,1-aminomutase activity | 2.57E-04 |
| 20 | GO:0004801: sedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glyceronetransferase activity | 2.57E-04 |
| 21 | GO:0008676: 3-deoxy-8-phosphooctulonate synthase activity | 2.57E-04 |
| 22 | GO:0047066: phospholipid-hydroperoxide glutathione peroxidase activity | 2.57E-04 |
| 23 | GO:0004856: xylulokinase activity | 2.57E-04 |
| 24 | GO:0009496: plastoquinol--plastocyanin reductase activity | 2.57E-04 |
| 25 | GO:0004853: uroporphyrinogen decarboxylase activity | 2.57E-04 |
| 26 | GO:0046028: electron transporter, transferring electrons from cytochrome b6/f complex of photosystem II activity | 2.57E-04 |
| 27 | GO:0045157: electron transporter, transferring electrons within the noncyclic electron transport pathway of photosynthesis activity | 2.57E-04 |
| 28 | GO:0051082: unfolded protein binding | 4.54E-04 |
| 29 | GO:0008047: enzyme activator activity | 4.99E-04 |
| 30 | GO:0010297: heteropolysaccharide binding | 5.68E-04 |
| 31 | GO:0003844: 1,4-alpha-glucan branching enzyme activity | 5.68E-04 |
| 32 | GO:0008967: phosphoglycolate phosphatase activity | 5.68E-04 |
| 33 | GO:0004614: phosphoglucomutase activity | 5.68E-04 |
| 34 | GO:0008839: 4-hydroxy-tetrahydrodipicolinate reductase | 5.68E-04 |
| 35 | GO:0008236: serine-type peptidase activity | 6.23E-04 |
| 36 | GO:0031072: heat shock protein binding | 7.47E-04 |
| 37 | GO:0004252: serine-type endopeptidase activity | 7.52E-04 |
| 38 | GO:0008266: poly(U) RNA binding | 8.40E-04 |
| 39 | GO:0045174: glutathione dehydrogenase (ascorbate) activity | 9.22E-04 |
| 40 | GO:0004324: ferredoxin-NADP+ reductase activity | 9.22E-04 |
| 41 | GO:0043169: cation binding | 9.22E-04 |
| 42 | GO:0017150: tRNA dihydrouridine synthase activity | 9.22E-04 |
| 43 | GO:0002161: aminoacyl-tRNA editing activity | 9.22E-04 |
| 44 | GO:0045158: electron transporter, transferring electrons within cytochrome b6/f complex of photosystem II activity | 9.22E-04 |
| 45 | GO:0005504: fatty acid binding | 9.22E-04 |
| 46 | GO:0004550: nucleoside diphosphate kinase activity | 1.32E-03 |
| 47 | GO:0043023: ribosomal large subunit binding | 1.32E-03 |
| 48 | GO:0004742: dihydrolipoyllysine-residue acetyltransferase activity | 1.32E-03 |
| 49 | GO:0016851: magnesium chelatase activity | 1.32E-03 |
| 50 | GO:0016149: translation release factor activity, codon specific | 1.32E-03 |
| 51 | GO:0042277: peptide binding | 1.76E-03 |
| 52 | GO:0016279: protein-lysine N-methyltransferase activity | 1.76E-03 |
| 53 | GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | 1.76E-03 |
| 54 | GO:0019199: transmembrane receptor protein kinase activity | 1.76E-03 |
| 55 | GO:0045430: chalcone isomerase activity | 1.76E-03 |
| 56 | GO:0016491: oxidoreductase activity | 1.79E-03 |
| 57 | GO:0047134: protein-disulfide reductase activity | 1.95E-03 |
| 58 | GO:0000287: magnesium ion binding | 1.96E-03 |
| 59 | GO:0016773: phosphotransferase activity, alcohol group as acceptor | 2.25E-03 |
| 60 | GO:0003959: NADPH dehydrogenase activity | 2.25E-03 |
| 61 | GO:0004791: thioredoxin-disulfide reductase activity | 2.43E-03 |
| 62 | GO:0050662: coenzyme binding | 2.43E-03 |
| 63 | GO:0016615: malate dehydrogenase activity | 2.77E-03 |
| 64 | GO:0004130: cytochrome-c peroxidase activity | 2.77E-03 |
| 65 | GO:0048038: quinone binding | 2.79E-03 |
| 66 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 3.18E-03 |
| 67 | GO:0004602: glutathione peroxidase activity | 3.33E-03 |
| 68 | GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity | 3.33E-03 |
| 69 | GO:0030060: L-malate dehydrogenase activity | 3.33E-03 |
| 70 | GO:0016168: chlorophyll binding | 4.26E-03 |
| 71 | GO:0004033: aldo-keto reductase (NADP) activity | 4.56E-03 |
| 72 | GO:0004222: metalloendopeptidase activity | 5.79E-03 |
| 73 | GO:0003747: translation release factor activity | 5.92E-03 |
| 74 | GO:0044183: protein binding involved in protein folding | 8.19E-03 |
| 75 | GO:0000049: tRNA binding | 9.00E-03 |
| 76 | GO:0051537: 2 iron, 2 sulfur cluster binding | 9.29E-03 |
| 77 | GO:0004601: peroxidase activity | 9.74E-03 |
| 78 | GO:0004089: carbonate dehydratase activity | 9.85E-03 |
| 79 | GO:0031409: pigment binding | 1.25E-02 |
| 80 | GO:0004857: enzyme inhibitor activity | 1.35E-02 |
| 81 | GO:0015035: protein disulfide oxidoreductase activity | 1.70E-02 |
| 82 | GO:0022891: substrate-specific transmembrane transporter activity | 1.76E-02 |
| 83 | GO:0004812: aminoacyl-tRNA ligase activity | 1.97E-02 |
| 84 | GO:0005200: structural constituent of cytoskeleton | 3.06E-02 |
| 85 | GO:0008483: transaminase activity | 3.06E-02 |
| 86 | GO:0008237: metallopeptidase activity | 3.06E-02 |
| 87 | GO:0005509: calcium ion binding | 3.07E-02 |
| 88 | GO:0003723: RNA binding | 3.45E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0042579: microbody | 0.00E+00 |
| 2 | GO:0005943: phosphatidylinositol 3-kinase complex, class IA | 0.00E+00 |
| 3 | GO:0044391: ribosomal subunit | 0.00E+00 |
| 4 | GO:0009507: chloroplast | 1.09E-96 |
| 5 | GO:0009570: chloroplast stroma | 4.46E-66 |
| 6 | GO:0009941: chloroplast envelope | 2.69E-61 |
| 7 | GO:0009535: chloroplast thylakoid membrane | 8.95E-50 |
| 8 | GO:0009579: thylakoid | 2.86E-39 |
| 9 | GO:0009534: chloroplast thylakoid | 3.39E-39 |
| 10 | GO:0009543: chloroplast thylakoid lumen | 1.96E-22 |
| 11 | GO:0031977: thylakoid lumen | 1.64E-20 |
| 12 | GO:0005840: ribosome | 7.91E-20 |
| 13 | GO:0010319: stromule | 1.29E-11 |
| 14 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 1.37E-07 |
| 15 | GO:0010287: plastoglobule | 3.88E-07 |
| 16 | GO:0009654: photosystem II oxygen evolving complex | 3.08E-06 |
| 17 | GO:0009533: chloroplast stromal thylakoid | 3.56E-06 |
| 18 | GO:0009706: chloroplast inner membrane | 4.03E-06 |
| 19 | GO:0019898: extrinsic component of membrane | 1.55E-05 |
| 20 | GO:0005960: glycine cleavage complex | 2.51E-05 |
| 21 | GO:0009295: nucleoid | 3.00E-05 |
| 22 | GO:0009508: plastid chromosome | 3.88E-05 |
| 23 | GO:0030095: chloroplast photosystem II | 4.73E-05 |
| 24 | GO:0009536: plastid | 1.15E-04 |
| 25 | GO:0016020: membrane | 1.44E-04 |
| 26 | GO:0009538: photosystem I reaction center | 2.41E-04 |
| 27 | GO:0009782: photosystem I antenna complex | 2.57E-04 |
| 28 | GO:0048046: apoplast | 2.76E-04 |
| 29 | GO:0000427: plastid-encoded plastid RNA polymerase complex | 5.68E-04 |
| 30 | GO:0030093: chloroplast photosystem I | 5.68E-04 |
| 31 | GO:0000311: plastid large ribosomal subunit | 6.59E-04 |
| 32 | GO:0015934: large ribosomal subunit | 7.97E-04 |
| 33 | GO:0009528: plastid inner membrane | 9.22E-04 |
| 34 | GO:0010007: magnesium chelatase complex | 9.22E-04 |
| 35 | GO:0015935: small ribosomal subunit | 1.39E-03 |
| 36 | GO:0009532: plastid stroma | 1.39E-03 |
| 37 | GO:0009527: plastid outer membrane | 1.76E-03 |
| 38 | GO:0009517: PSII associated light-harvesting complex II | 1.76E-03 |
| 39 | GO:0009512: cytochrome b6f complex | 2.25E-03 |
| 40 | GO:0009523: photosystem II | 2.61E-03 |
| 41 | GO:0022625: cytosolic large ribosomal subunit | 3.03E-03 |
| 42 | GO:0016272: prefoldin complex | 3.33E-03 |
| 43 | GO:0009840: chloroplastic endopeptidase Clp complex | 3.33E-03 |
| 44 | GO:0009501: amyloplast | 4.56E-03 |
| 45 | GO:0005763: mitochondrial small ribosomal subunit | 5.92E-03 |
| 46 | GO:0045298: tubulin complex | 5.92E-03 |
| 47 | GO:0000312: plastid small ribosomal subunit | 1.07E-02 |
| 48 | GO:0022626: cytosolic ribosome | 1.13E-02 |
| 49 | GO:0030076: light-harvesting complex | 1.16E-02 |
| 50 | GO:0043234: protein complex | 1.25E-02 |
| 51 | GO:0031969: chloroplast membrane | 1.28E-02 |
| 52 | GO:0042651: thylakoid membrane | 1.45E-02 |
| 53 | GO:0009522: photosystem I | 2.32E-02 |
| 54 | GO:0030529: intracellular ribonucleoprotein complex | 3.32E-02 |
| 55 | GO:0009707: chloroplast outer membrane | 4.01E-02 |