GO Enrichment Analysis of Co-expressed Genes with
AT2G41950
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0046460: neutral lipid biosynthetic process | 0.00E+00 |
| 2 | GO:0018316: peptide cross-linking via L-cystine | 0.00E+00 |
| 3 | GO:0009249: protein lipoylation | 0.00E+00 |
| 4 | GO:0090071: negative regulation of ribosome biogenesis | 0.00E+00 |
| 5 | GO:0009106: lipoate metabolic process | 0.00E+00 |
| 6 | GO:0010275: NAD(P)H dehydrogenase complex assembly | 3.44E-07 |
| 7 | GO:0034971: histone H3-R17 methylation | 7.90E-05 |
| 8 | GO:0071454: cellular response to anoxia | 7.90E-05 |
| 9 | GO:0034970: histone H3-R2 methylation | 7.90E-05 |
| 10 | GO:0034972: histone H3-R26 methylation | 7.90E-05 |
| 11 | GO:0080064: 4,4-dimethyl-9beta,19-cyclopropylsterol oxidation | 1.89E-04 |
| 12 | GO:0019919: peptidyl-arginine methylation, to asymmetrical-dimethyl arginine | 1.89E-04 |
| 13 | GO:0080153: negative regulation of reductive pentose-phosphate cycle | 1.89E-04 |
| 14 | GO:0009107: lipoate biosynthetic process | 7.72E-04 |
| 15 | GO:0010375: stomatal complex patterning | 7.72E-04 |
| 16 | GO:0042793: transcription from plastid promoter | 9.42E-04 |
| 17 | GO:0000741: karyogamy | 9.42E-04 |
| 18 | GO:0017148: negative regulation of translation | 1.12E-03 |
| 19 | GO:0010019: chloroplast-nucleus signaling pathway | 1.12E-03 |
| 20 | GO:0034389: lipid particle organization | 1.12E-03 |
| 21 | GO:0009704: de-etiolation | 1.51E-03 |
| 22 | GO:0000105: histidine biosynthetic process | 1.51E-03 |
| 23 | GO:0010928: regulation of auxin mediated signaling pathway | 1.51E-03 |
| 24 | GO:0042255: ribosome assembly | 1.51E-03 |
| 25 | GO:0006353: DNA-templated transcription, termination | 1.51E-03 |
| 26 | GO:0019430: removal of superoxide radicals | 1.72E-03 |
| 27 | GO:0010100: negative regulation of photomorphogenesis | 1.72E-03 |
| 28 | GO:0032544: plastid translation | 1.72E-03 |
| 29 | GO:0022900: electron transport chain | 1.72E-03 |
| 30 | GO:0009245: lipid A biosynthetic process | 1.95E-03 |
| 31 | GO:0019432: triglyceride biosynthetic process | 1.95E-03 |
| 32 | GO:0009098: leucine biosynthetic process | 2.18E-03 |
| 33 | GO:1900865: chloroplast RNA modification | 2.18E-03 |
| 34 | GO:0043085: positive regulation of catalytic activity | 2.66E-03 |
| 35 | GO:0045037: protein import into chloroplast stroma | 2.92E-03 |
| 36 | GO:0009767: photosynthetic electron transport chain | 3.18E-03 |
| 37 | GO:0010207: photosystem II assembly | 3.45E-03 |
| 38 | GO:0034605: cellular response to heat | 3.45E-03 |
| 39 | GO:0019253: reductive pentose-phosphate cycle | 3.45E-03 |
| 40 | GO:0006071: glycerol metabolic process | 4.02E-03 |
| 41 | GO:0000162: tryptophan biosynthetic process | 4.02E-03 |
| 42 | GO:0006289: nucleotide-excision repair | 4.31E-03 |
| 43 | GO:0070417: cellular response to cold | 6.22E-03 |
| 44 | GO:0008033: tRNA processing | 6.57E-03 |
| 45 | GO:0009958: positive gravitropism | 6.92E-03 |
| 46 | GO:0010197: polar nucleus fusion | 6.92E-03 |
| 47 | GO:0015986: ATP synthesis coupled proton transport | 7.28E-03 |
| 48 | GO:0009851: auxin biosynthetic process | 7.64E-03 |
| 49 | GO:0032502: developmental process | 8.39E-03 |
| 50 | GO:0007264: small GTPase mediated signal transduction | 8.39E-03 |
| 51 | GO:0009658: chloroplast organization | 8.55E-03 |
| 52 | GO:0042254: ribosome biogenesis | 8.71E-03 |
| 53 | GO:0016126: sterol biosynthetic process | 1.04E-02 |
| 54 | GO:0015995: chlorophyll biosynthetic process | 1.16E-02 |
| 55 | GO:0006281: DNA repair | 1.57E-02 |
| 56 | GO:0009744: response to sucrose | 1.77E-02 |
| 57 | GO:0006260: DNA replication | 2.02E-02 |
| 58 | GO:0009585: red, far-red light phototransduction | 2.19E-02 |
| 59 | GO:0051603: proteolysis involved in cellular protein catabolic process | 2.24E-02 |
| 60 | GO:0009909: regulation of flower development | 2.35E-02 |
| 61 | GO:0006417: regulation of translation | 2.35E-02 |
| 62 | GO:0006396: RNA processing | 2.87E-02 |
| 63 | GO:0006412: translation | 3.45E-02 |
| 64 | GO:0006633: fatty acid biosynthetic process | 3.88E-02 |
| 65 | GO:0009451: RNA modification | 4.21E-02 |
| 66 | GO:0010228: vegetative to reproductive phase transition of meristem | 4.28E-02 |
| 67 | GO:0008380: RNA splicing | 4.70E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0033819: lipoyl(octanoyl) transferase activity | 0.00E+00 |
| 2 | GO:0004848: ureidoglycolate hydrolase activity | 1.31E-06 |
| 3 | GO:0004424: imidazoleglycerol-phosphate dehydratase activity | 7.90E-05 |
| 4 | GO:0046906: tetrapyrrole binding | 7.90E-05 |
| 5 | GO:0033984: indole-3-glycerol-phosphate lyase activity | 7.90E-05 |
| 6 | GO:0003862: 3-isopropylmalate dehydrogenase activity | 1.89E-04 |
| 7 | GO:0016277: [myelin basic protein]-arginine N-methyltransferase activity | 1.89E-04 |
| 8 | GO:0017118: lipoyltransferase activity | 1.89E-04 |
| 9 | GO:0035242: protein-arginine omega-N asymmetric methyltransferase activity | 1.89E-04 |
| 10 | GO:0016415: octanoyltransferase activity | 1.89E-04 |
| 11 | GO:0035241: protein-arginine omega-N monomethyltransferase activity | 1.89E-04 |
| 12 | GO:0017176: phosphatidylinositol N-acetylglucosaminyltransferase activity | 3.17E-04 |
| 13 | GO:0008469: histone-arginine N-methyltransferase activity | 3.17E-04 |
| 14 | GO:0019003: GDP binding | 3.17E-04 |
| 15 | GO:0043023: ribosomal large subunit binding | 4.58E-04 |
| 16 | GO:0000254: C-4 methylsterol oxidase activity | 4.58E-04 |
| 17 | GO:0004834: tryptophan synthase activity | 6.09E-04 |
| 18 | GO:0031177: phosphopantetheine binding | 9.42E-04 |
| 19 | GO:0004784: superoxide dismutase activity | 9.42E-04 |
| 20 | GO:0000035: acyl binding | 1.12E-03 |
| 21 | GO:0004144: diacylglycerol O-acyltransferase activity | 1.12E-03 |
| 22 | GO:0019899: enzyme binding | 1.31E-03 |
| 23 | GO:0004525: ribonuclease III activity | 1.51E-03 |
| 24 | GO:0000036: ACP phosphopantetheine attachment site binding involved in fatty acid biosynthetic process | 1.51E-03 |
| 25 | GO:0001055: RNA polymerase II activity | 2.18E-03 |
| 26 | GO:0003690: double-stranded DNA binding | 2.35E-03 |
| 27 | GO:0001054: RNA polymerase I activity | 2.66E-03 |
| 28 | GO:0001056: RNA polymerase III activity | 2.92E-03 |
| 29 | GO:0019843: rRNA binding | 4.02E-03 |
| 30 | GO:0003887: DNA-directed DNA polymerase activity | 4.02E-03 |
| 31 | GO:0003727: single-stranded RNA binding | 5.89E-03 |
| 32 | GO:0046933: proton-transporting ATP synthase activity, rotational mechanism | 6.92E-03 |
| 33 | GO:0048038: quinone binding | 8.01E-03 |
| 34 | GO:0004518: nuclease activity | 8.39E-03 |
| 35 | GO:0003746: translation elongation factor activity | 1.48E-02 |
| 36 | GO:0003697: single-stranded DNA binding | 1.48E-02 |
| 37 | GO:0004712: protein serine/threonine/tyrosine kinase activity | 1.57E-02 |
| 38 | GO:0004185: serine-type carboxypeptidase activity | 1.77E-02 |
| 39 | GO:0051537: 2 iron, 2 sulfur cluster binding | 1.87E-02 |
| 40 | GO:0016491: oxidoreductase activity | 1.87E-02 |
| 41 | GO:0051287: NAD binding | 2.02E-02 |
| 42 | GO:0003723: RNA binding | 2.18E-02 |
| 43 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 2.19E-02 |
| 44 | GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups | 2.52E-02 |
| 45 | GO:0003735: structural constituent of ribosome | 3.14E-02 |
| 46 | GO:0008565: protein transporter activity | 3.75E-02 |
| 47 | GO:0008194: UDP-glycosyltransferase activity | 4.49E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0030427: site of polarized growth | 0.00E+00 |
| 2 | GO:0009507: chloroplast | 1.21E-17 |
| 3 | GO:0009535: chloroplast thylakoid membrane | 2.07E-07 |
| 4 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 6.25E-05 |
| 5 | GO:0009570: chloroplast stroma | 4.55E-04 |
| 6 | GO:0042646: plastid nucleoid | 4.58E-04 |
| 7 | GO:0009295: nucleoid | 7.35E-04 |
| 8 | GO:0009840: chloroplastic endopeptidase Clp complex | 1.12E-03 |
| 9 | GO:0009579: thylakoid | 1.30E-03 |
| 10 | GO:0005811: lipid particle | 1.72E-03 |
| 11 | GO:0042644: chloroplast nucleoid | 1.95E-03 |
| 12 | GO:0009508: plastid chromosome | 3.18E-03 |
| 13 | GO:0009706: chloroplast inner membrane | 3.21E-03 |
| 14 | GO:0000419: DNA-directed RNA polymerase V complex | 4.02E-03 |
| 15 | GO:0043234: protein complex | 4.02E-03 |
| 16 | GO:0042651: thylakoid membrane | 4.61E-03 |
| 17 | GO:0070469: respiratory chain | 4.61E-03 |
| 18 | GO:0015935: small ribosomal subunit | 4.92E-03 |
| 19 | GO:0009534: chloroplast thylakoid | 6.85E-03 |
| 20 | GO:0005819: spindle | 1.57E-02 |
| 21 | GO:0009536: plastid | 1.71E-02 |
| 22 | GO:0031966: mitochondrial membrane | 2.08E-02 |
| 23 | GO:0009543: chloroplast thylakoid lumen | 3.30E-02 |
| 24 | GO:0005623: cell | 3.36E-02 |