co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT2G41630

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0032953: regulation of (1->3)-beta-D-glucan biosynthetic process	0.00E+00
2	GO:0070328: triglyceride homeostasis	0.00E+00
3	GO:0071475: cellular hyperosmotic salinity response	0.00E+00
4	GO:0055091: phospholipid homeostasis	0.00E+00
5	GO:0035024: negative regulation of Rho protein signal transduction	0.00E+00
6	GO:0080021: response to benzoic acid	0.00E+00
7	GO:0051180: vitamin transport	1.08E-04
8	GO:0030974: thiamine pyrophosphate transport	1.08E-04
9	GO:0009865: pollen tube adhesion	1.08E-04
10	GO:0010507: negative regulation of autophagy	2.52E-04
11	GO:0031407: oxylipin metabolic process	2.52E-04
12	GO:0055088: lipid homeostasis	2.52E-04
13	GO:0015893: drug transport	2.52E-04
14	GO:0015786: UDP-glucose transport	2.52E-04
15	GO:0090630: activation of GTPase activity	4.19E-04
16	GO:0009961: response to 1-aminocyclopropane-1-carboxylic acid	4.19E-04
17	GO:0015783: GDP-fucose transport	4.19E-04
18	GO:0046786: viral replication complex formation and maintenance	4.19E-04
19	GO:0044210: 'de novo' CTP biosynthetic process	4.19E-04
20	GO:0055089: fatty acid homeostasis	6.01E-04
21	GO:0010371: regulation of gibberellin biosynthetic process	6.01E-04
22	GO:0070301: cellular response to hydrogen peroxide	6.01E-04
23	GO:0072334: UDP-galactose transmembrane transport	6.01E-04
24	GO:0080024: indolebutyric acid metabolic process	6.01E-04
25	GO:0022622: root system development	7.98E-04
26	GO:0006221: pyrimidine nucleotide biosynthetic process	7.98E-04
27	GO:0009790: embryo development	9.73E-04
28	GO:0032957: inositol trisphosphate metabolic process	1.01E-03
29	GO:0009247: glycolipid biosynthetic process	1.01E-03
30	GO:0006656: phosphatidylcholine biosynthetic process	1.01E-03
31	GO:0009697: salicylic acid biosynthetic process	1.01E-03
32	GO:0006873: cellular ion homeostasis	1.01E-03
33	GO:0019760: glucosinolate metabolic process	1.03E-03
34	GO:0047484: regulation of response to osmotic stress	1.23E-03
35	GO:0010337: regulation of salicylic acid metabolic process	1.23E-03
36	GO:1901001: negative regulation of response to salt stress	1.47E-03
37	GO:0010016: shoot system morphogenesis	1.47E-03
38	GO:0032880: regulation of protein localization	1.73E-03
39	GO:0006955: immune response	1.73E-03
40	GO:0006207: 'de novo' pyrimidine nucleobase biosynthetic process	1.73E-03
41	GO:0006811: ion transport	1.74E-03
42	GO:0009611: response to wounding	1.94E-03
43	GO:0009061: anaerobic respiration	2.00E-03
44	GO:0019375: galactolipid biosynthetic process	2.00E-03
45	GO:0051707: response to other organism	2.56E-03
46	GO:0010200: response to chitin	2.83E-03
47	GO:2000280: regulation of root development	2.88E-03
48	GO:0007346: regulation of mitotic cell cycle	2.88E-03
49	GO:0009641: shade avoidance	3.20E-03
50	GO:0042538: hyperosmotic salinity response	3.20E-03
51	GO:0055062: phosphate ion homeostasis	3.20E-03
52	GO:0030148: sphingolipid biosynthetic process	3.53E-03
53	GO:0050826: response to freezing	4.23E-03
54	GO:0018107: peptidyl-threonine phosphorylation	4.23E-03
55	GO:2000012: regulation of auxin polar transport	4.23E-03
56	GO:0009751: response to salicylic acid	4.36E-03
57	GO:0048467: gynoecium development	4.59E-03
58	GO:0009624: response to nematode	4.86E-03
59	GO:0010167: response to nitrate	4.96E-03
60	GO:0070588: calcium ion transmembrane transport	4.96E-03
61	GO:0009833: plant-type primary cell wall biogenesis	5.35E-03
62	GO:0000398: mRNA splicing, via spliceosome	5.61E-03
63	GO:0009873: ethylene-activated signaling pathway	6.13E-03
64	GO:0031408: oxylipin biosynthetic process	6.56E-03
65	GO:0051321: meiotic cell cycle	6.56E-03
66	GO:0071215: cellular response to abscisic acid stimulus	7.42E-03
67	GO:0001944: vasculature development	7.42E-03
68	GO:0006355: regulation of transcription, DNA-templated	7.58E-03
69	GO:0010584: pollen exine formation	7.87E-03
70	GO:0008284: positive regulation of cell proliferation	8.32E-03
71	GO:0042631: cellular response to water deprivation	8.79E-03
72	GO:0016567: protein ubiquitination	8.96E-03
73	GO:0048868: pollen tube development	9.26E-03
74	GO:0009958: positive gravitropism	9.26E-03
75	GO:0006470: protein dephosphorylation	9.60E-03
76	GO:0010468: regulation of gene expression	1.00E-02
77	GO:0008654: phospholipid biosynthetic process	1.02E-02
78	GO:0048510: regulation of timing of transition from vegetative to reproductive phase	1.07E-02
79	GO:0051607: defense response to virus	1.34E-02
80	GO:0010027: thylakoid membrane organization	1.39E-02
81	GO:0010029: regulation of seed germination	1.45E-02
82	GO:0009627: systemic acquired resistance	1.51E-02
83	GO:0016049: cell growth	1.62E-02
84	GO:0048481: plant ovule development	1.68E-02
85	GO:0048527: lateral root development	1.86E-02
86	GO:0045087: innate immune response	1.99E-02
87	GO:0006351: transcription, DNA-templated	2.03E-02
88	GO:0006839: mitochondrial transport	2.18E-02
89	GO:0009414: response to water deprivation	2.18E-02
90	GO:0006631: fatty acid metabolic process	2.25E-02
91	GO:0010114: response to red light	2.38E-02
92	GO:0009753: response to jasmonic acid	2.56E-02
93	GO:0000165: MAPK cascade	2.73E-02
94	GO:0009846: pollen germination	2.80E-02
95	GO:0009809: lignin biosynthetic process	2.94E-02
96	GO:0009626: plant-type hypersensitive response	3.47E-02
97	GO:0006396: RNA processing	3.86E-02
98	GO:0018105: peptidyl-serine phosphorylation	3.86E-02
99	GO:0035556: intracellular signal transduction	4.46E-02
100	GO:0009058: biosynthetic process	4.61E-02

Rank	GO Term	Adjusted P value
1	GO:0017048: Rho GTPase binding	0.00E+00
2	GO:0008419: RNA lariat debranching enzyme activity	0.00E+00
3	GO:0042171: lysophosphatidic acid acyltransferase activity	0.00E+00
4	GO:0003883: CTP synthase activity	5.42E-06
5	GO:0090422: thiamine pyrophosphate transporter activity	1.08E-04
6	GO:0004105: choline-phosphate cytidylyltransferase activity	1.08E-04
7	GO:0052638: indole-3-butyrate beta-glucosyltransferase activity	1.08E-04
8	GO:0005096: GTPase activator activity	1.42E-04
9	GO:0001047: core promoter binding	2.52E-04
10	GO:0046509: 1,2-diacylglycerol 3-beta-galactosyltransferase activity	2.52E-04
11	GO:0004127: cytidylate kinase activity	2.52E-04
12	GO:0045140: inositol phosphoceramide synthase activity	2.52E-04
13	GO:0016629: 12-oxophytodienoate reductase activity	2.52E-04
14	GO:0017022: myosin binding	2.52E-04
15	GO:0044212: transcription regulatory region DNA binding	2.82E-04
16	GO:0005457: GDP-fucose transmembrane transporter activity	4.19E-04
17	GO:0047325: inositol tetrakisphosphate 1-kinase activity	4.19E-04
18	GO:0052726: inositol-1,3,4-trisphosphate 5-kinase activity	4.19E-04
19	GO:0004383: guanylate cyclase activity	4.19E-04
20	GO:0052725: inositol-1,3,4-trisphosphate 6-kinase activity	6.01E-04
21	GO:0019201: nucleotide kinase activity	6.01E-04
22	GO:0001653: peptide receptor activity	6.01E-04
23	GO:0009041: uridylate kinase activity	6.01E-04
24	GO:0035250: UDP-galactosyltransferase activity	6.01E-04
25	GO:0005460: UDP-glucose transmembrane transporter activity	6.01E-04
26	GO:0003841: 1-acylglycerol-3-phosphate O-acyltransferase activity	7.98E-04
27	GO:0070696: transmembrane receptor protein serine/threonine kinase binding	1.01E-03
28	GO:0005459: UDP-galactose transmembrane transporter activity	1.01E-03
29	GO:0004623: phospholipase A2 activity	1.01E-03
30	GO:0016621: cinnamoyl-CoA reductase activity	1.73E-03
31	GO:0004842: ubiquitin-protein transferase activity	2.26E-03
32	GO:0008308: voltage-gated anion channel activity	2.28E-03
33	GO:0004722: protein serine/threonine phosphatase activity	3.82E-03
34	GO:0005262: calcium channel activity	4.23E-03
35	GO:0008083: growth factor activity	4.59E-03
36	GO:0042973: glucan endo-1,3-beta-D-glucosidase activity	4.59E-03
37	GO:0004867: serine-type endopeptidase inhibitor activity	4.96E-03
38	GO:0035251: UDP-glucosyltransferase activity	6.56E-03
39	GO:0004707: MAP kinase activity	6.56E-03
40	GO:0043565: sequence-specific DNA binding	7.25E-03
41	GO:0003700: transcription factor activity, sequence-specific DNA binding	8.81E-03
42	GO:0008194: UDP-glycosyltransferase activity	9.39E-03
43	GO:0010181: FMN binding	9.74E-03
44	GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity	1.28E-02
45	GO:0004004: ATP-dependent RNA helicase activity	1.56E-02
46	GO:0004693: cyclin-dependent protein serine/threonine kinase activity	1.80E-02
47	GO:0035091: phosphatidylinositol binding	2.52E-02
48	GO:0016301: kinase activity	2.89E-02
49	GO:0016298: lipase activity	3.02E-02
50	GO:0008234: cysteine-type peptidase activity	3.17E-02
51	GO:0080043: quercetin 3-O-glucosyltransferase activity	3.55E-02
52	GO:0080044: quercetin 7-O-glucosyltransferase activity	3.55E-02
53	GO:0022857: transmembrane transporter activity	3.63E-02
54	GO:0016746: transferase activity, transferring acyl groups	3.86E-02
55	GO:0004386: helicase activity	4.02E-02
56	GO:0016758: transferase activity, transferring hexosyl groups	4.35E-02

Rank	GO Term	Adjusted P value
1	GO:0070382: exocytic vesicle	1.08E-04
2	GO:0030133: transport vesicle	2.52E-04
3	GO:0045177: apical part of cell	6.01E-04
4	GO:0031463: Cul3-RING ubiquitin ligase complex	1.23E-03
5	GO:0016607: nuclear speck	4.18E-03
6	GO:0005938: cell cortex	4.23E-03
7	GO:0005634: nucleus	8.64E-03
8	GO:0031225: anchored component of membrane	1.62E-02
9	GO:0005622: intracellular	1.91E-02
10	GO:0005743: mitochondrial inner membrane	2.22E-02
11	GO:0090406: pollen tube	2.38E-02
12	GO:0005681: spliceosomal complex	3.32E-02
13	GO:0009706: chloroplast inner membrane	3.78E-02