GO Enrichment Analysis of Co-expressed Genes with
AT2G40430
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0044843: cell cycle G1/S phase transition | 0.00E+00 |
| 2 | GO:0006412: translation | 1.60E-06 |
| 3 | GO:0006364: rRNA processing | 2.48E-05 |
| 4 | GO:0010365: positive regulation of ethylene biosynthetic process | 2.53E-05 |
| 5 | GO:0000494: box C/D snoRNA 3'-end processing | 2.53E-05 |
| 6 | GO:1990258: histone glutamine methylation | 2.53E-05 |
| 7 | GO:1901430: positive regulation of syringal lignin biosynthetic process | 2.53E-05 |
| 8 | GO:0009967: positive regulation of signal transduction | 6.44E-05 |
| 9 | GO:0071497: cellular response to freezing | 6.44E-05 |
| 10 | GO:0042744: hydrogen peroxide catabolic process | 7.43E-05 |
| 11 | GO:0008652: cellular amino acid biosynthetic process | 1.13E-04 |
| 12 | GO:0009413: response to flooding | 1.69E-04 |
| 13 | GO:0042274: ribosomal small subunit biogenesis | 2.30E-04 |
| 14 | GO:0031167: rRNA methylation | 2.95E-04 |
| 15 | GO:0006564: L-serine biosynthetic process | 2.95E-04 |
| 16 | GO:0050829: defense response to Gram-negative bacterium | 5.11E-04 |
| 17 | GO:1900057: positive regulation of leaf senescence | 5.11E-04 |
| 18 | GO:0022900: electron transport chain | 6.69E-04 |
| 19 | GO:0001510: RNA methylation | 6.69E-04 |
| 20 | GO:0001558: regulation of cell growth | 6.69E-04 |
| 21 | GO:0048367: shoot system development | 6.71E-04 |
| 22 | GO:0010162: seed dormancy process | 9.24E-04 |
| 23 | GO:0009682: induced systemic resistance | 1.01E-03 |
| 24 | GO:0006807: nitrogen compound metabolic process | 1.20E-03 |
| 25 | GO:0006413: translational initiation | 1.22E-03 |
| 26 | GO:0009944: polarity specification of adaxial/abaxial axis | 1.61E-03 |
| 27 | GO:0051302: regulation of cell division | 1.72E-03 |
| 28 | GO:0048511: rhythmic process | 1.83E-03 |
| 29 | GO:0009651: response to salt stress | 1.87E-03 |
| 30 | GO:0030245: cellulose catabolic process | 1.95E-03 |
| 31 | GO:0042254: ribosome biogenesis | 2.03E-03 |
| 32 | GO:0006979: response to oxidative stress | 2.04E-03 |
| 33 | GO:0071215: cellular response to abscisic acid stimulus | 2.06E-03 |
| 34 | GO:0009294: DNA mediated transformation | 2.06E-03 |
| 35 | GO:0040007: growth | 2.06E-03 |
| 36 | GO:0010089: xylem development | 2.18E-03 |
| 37 | GO:0009561: megagametogenesis | 2.18E-03 |
| 38 | GO:0008033: tRNA processing | 2.42E-03 |
| 39 | GO:0006869: lipid transport | 3.21E-03 |
| 40 | GO:0019760: glucosinolate metabolic process | 3.34E-03 |
| 41 | GO:0009751: response to salicylic acid | 3.56E-03 |
| 42 | GO:0048364: root development | 3.76E-03 |
| 43 | GO:0009753: response to jasmonic acid | 3.87E-03 |
| 44 | GO:0010029: regulation of seed germination | 3.91E-03 |
| 45 | GO:0007275: multicellular organism development | 4.74E-03 |
| 46 | GO:0009734: auxin-activated signaling pathway | 5.06E-03 |
| 47 | GO:0009737: response to abscisic acid | 5.24E-03 |
| 48 | GO:0006839: mitochondrial transport | 5.81E-03 |
| 49 | GO:0000154: rRNA modification | 6.85E-03 |
| 50 | GO:0009664: plant-type cell wall organization | 7.40E-03 |
| 51 | GO:0009809: lignin biosynthetic process | 7.78E-03 |
| 52 | GO:0009620: response to fungus | 9.34E-03 |
| 53 | GO:0042545: cell wall modification | 9.74E-03 |
| 54 | GO:0009058: biosynthetic process | 1.21E-02 |
| 55 | GO:0009845: seed germination | 1.23E-02 |
| 56 | GO:0040008: regulation of growth | 1.42E-02 |
| 57 | GO:0045490: pectin catabolic process | 1.46E-02 |
| 58 | GO:0010150: leaf senescence | 1.46E-02 |
| 59 | GO:0009617: response to bacterium | 1.66E-02 |
| 60 | GO:0055114: oxidation-reduction process | 1.71E-02 |
| 61 | GO:0009723: response to ethylene | 2.21E-02 |
| 62 | GO:0045892: negative regulation of transcription, DNA-templated | 2.67E-02 |
| 63 | GO:0009793: embryo development ending in seed dormancy | 3.00E-02 |
| 64 | GO:0016042: lipid catabolic process | 3.01E-02 |
| 65 | GO:0009873: ethylene-activated signaling pathway | 3.68E-02 |
| 66 | GO:0050832: defense response to fungus | 3.84E-02 |
| 67 | GO:0009735: response to cytokinin | 4.33E-02 |
| 68 | GO:0009555: pollen development | 4.62E-02 |
| 69 | GO:0009611: response to wounding | 4.69E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0003735: structural constituent of ribosome | 3.93E-08 |
| 2 | GO:0030515: snoRNA binding | 4.77E-06 |
| 3 | GO:0004128: cytochrome-b5 reductase activity, acting on NAD(P)H | 2.53E-05 |
| 4 | GO:1990259: histone-glutamine methyltransferase activity | 2.53E-05 |
| 5 | GO:0004617: phosphoglycerate dehydrogenase activity | 6.44E-05 |
| 6 | GO:0005078: MAP-kinase scaffold activity | 6.44E-05 |
| 7 | GO:0008649: rRNA methyltransferase activity | 1.13E-04 |
| 8 | GO:0019201: nucleotide kinase activity | 1.69E-04 |
| 9 | GO:0004601: peroxidase activity | 1.84E-04 |
| 10 | GO:0004069: L-aspartate:2-oxoglutarate aminotransferase activity | 3.65E-04 |
| 11 | GO:0080130: L-phenylalanine:2-oxoglutarate aminotransferase activity | 3.65E-04 |
| 12 | GO:0004017: adenylate kinase activity | 4.36E-04 |
| 13 | GO:0008235: metalloexopeptidase activity | 5.11E-04 |
| 14 | GO:0003729: mRNA binding | 5.53E-04 |
| 15 | GO:0008135: translation factor activity, RNA binding | 6.69E-04 |
| 16 | GO:0015114: phosphate ion transmembrane transporter activity | 1.20E-03 |
| 17 | GO:0003743: translation initiation factor activity | 1.51E-03 |
| 18 | GO:0003723: RNA binding | 1.58E-03 |
| 19 | GO:0004407: histone deacetylase activity | 1.61E-03 |
| 20 | GO:0008810: cellulase activity | 2.06E-03 |
| 21 | GO:0005199: structural constituent of cell wall | 2.55E-03 |
| 22 | GO:0020037: heme binding | 3.59E-03 |
| 23 | GO:0016597: amino acid binding | 3.63E-03 |
| 24 | GO:0008289: lipid binding | 5.00E-03 |
| 25 | GO:0003746: translation elongation factor activity | 5.31E-03 |
| 26 | GO:0051287: NAD binding | 7.22E-03 |
| 27 | GO:0045330: aspartyl esterase activity | 8.35E-03 |
| 28 | GO:0030599: pectinesterase activity | 9.54E-03 |
| 29 | GO:0008026: ATP-dependent helicase activity | 1.04E-02 |
| 30 | GO:0019843: rRNA binding | 1.17E-02 |
| 31 | GO:0030170: pyridoxal phosphate binding | 1.25E-02 |
| 32 | GO:0046910: pectinesterase inhibitor activity | 1.39E-02 |
| 33 | GO:0016788: hydrolase activity, acting on ester bonds | 2.02E-02 |
| 34 | GO:0052689: carboxylic ester hydrolase activity | 2.50E-02 |
| 35 | GO:0004871: signal transducer activity | 2.73E-02 |
| 36 | GO:0003924: GTPase activity | 3.07E-02 |
| 37 | GO:0009055: electron carrier activity | 3.23E-02 |
| 38 | GO:0000166: nucleotide binding | 4.62E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0005730: nucleolus | 2.70E-11 |
| 2 | GO:0022627: cytosolic small ribosomal subunit | 1.59E-07 |
| 3 | GO:0005618: cell wall | 5.70E-07 |
| 4 | GO:0031428: box C/D snoRNP complex | 2.33E-06 |
| 5 | GO:0022626: cytosolic ribosome | 4.72E-06 |
| 6 | GO:0032040: small-subunit processome | 2.30E-05 |
| 7 | GO:0009530: primary cell wall | 1.13E-04 |
| 8 | GO:0022625: cytosolic large ribosomal subunit | 2.64E-04 |
| 9 | GO:0005840: ribosome | 3.21E-04 |
| 10 | GO:0015030: Cajal body | 8.38E-04 |
| 11 | GO:0005852: eukaryotic translation initiation factor 3 complex | 1.01E-03 |
| 12 | GO:0016020: membrane | 1.67E-03 |
| 13 | GO:0005741: mitochondrial outer membrane | 1.83E-03 |
| 14 | GO:0005829: cytosol | 2.11E-03 |
| 15 | GO:0009505: plant-type cell wall | 2.68E-03 |
| 16 | GO:0016592: mediator complex | 3.07E-03 |
| 17 | GO:0071944: cell periphery | 3.21E-03 |
| 18 | GO:0030529: intracellular ribonucleoprotein complex | 3.77E-03 |
| 19 | GO:0009506: plasmodesma | 3.98E-03 |
| 20 | GO:0009707: chloroplast outer membrane | 4.52E-03 |
| 21 | GO:0005576: extracellular region | 7.16E-03 |
| 22 | GO:0005834: heterotrimeric G-protein complex | 9.13E-03 |
| 23 | GO:0009536: plastid | 1.59E-02 |
| 24 | GO:0046658: anchored component of plasma membrane | 1.79E-02 |
| 25 | GO:0005743: mitochondrial inner membrane | 2.91E-02 |
| 26 | GO:0005774: vacuolar membrane | 4.47E-02 |