GO Enrichment Analysis of Co-expressed Genes with
AT2G39450
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:1903428: positive regulation of reactive oxygen species biosynthetic process | 0.00E+00 |
| 2 | GO:1901401: regulation of tetrapyrrole metabolic process | 0.00E+00 |
| 3 | GO:0009715: chalcone biosynthetic process | 0.00E+00 |
| 4 | GO:0009768: photosynthesis, light harvesting in photosystem I | 6.55E-13 |
| 5 | GO:0018298: protein-chromophore linkage | 9.62E-11 |
| 6 | GO:0009645: response to low light intensity stimulus | 1.77E-10 |
| 7 | GO:0015979: photosynthesis | 2.50E-10 |
| 8 | GO:0009644: response to high light intensity | 6.40E-10 |
| 9 | GO:0010114: response to red light | 3.50E-08 |
| 10 | GO:0010196: nonphotochemical quenching | 6.93E-08 |
| 11 | GO:0009769: photosynthesis, light harvesting in photosystem II | 6.93E-08 |
| 12 | GO:0090391: granum assembly | 6.25E-07 |
| 13 | GO:0010136: ureide catabolic process | 6.25E-07 |
| 14 | GO:0010218: response to far red light | 8.02E-07 |
| 15 | GO:0006145: purine nucleobase catabolic process | 1.51E-06 |
| 16 | GO:0006021: inositol biosynthetic process | 2.92E-06 |
| 17 | GO:0009269: response to desiccation | 3.05E-06 |
| 18 | GO:0010189: vitamin E biosynthetic process | 1.10E-05 |
| 19 | GO:0009642: response to light intensity | 2.02E-05 |
| 20 | GO:0010206: photosystem II repair | 3.26E-05 |
| 21 | GO:0090333: regulation of stomatal closure | 3.26E-05 |
| 22 | GO:0009637: response to blue light | 4.39E-05 |
| 23 | GO:0051775: response to redox state | 5.18E-05 |
| 24 | GO:0071277: cellular response to calcium ion | 5.18E-05 |
| 25 | GO:0006790: sulfur compound metabolic process | 6.74E-05 |
| 26 | GO:0046854: phosphatidylinositol phosphorylation | 1.02E-04 |
| 27 | GO:0006833: water transport | 1.16E-04 |
| 28 | GO:0009629: response to gravity | 1.27E-04 |
| 29 | GO:0000256: allantoin catabolic process | 1.27E-04 |
| 30 | GO:0016122: xanthophyll metabolic process | 1.27E-04 |
| 31 | GO:0006729: tetrahydrobiopterin biosynthetic process | 1.27E-04 |
| 32 | GO:0009915: phloem sucrose loading | 1.27E-04 |
| 33 | GO:0034220: ion transmembrane transport | 2.50E-04 |
| 34 | GO:0006020: inositol metabolic process | 3.17E-04 |
| 35 | GO:0006107: oxaloacetate metabolic process | 3.17E-04 |
| 36 | GO:0030104: water homeostasis | 4.24E-04 |
| 37 | GO:0006734: NADH metabolic process | 4.24E-04 |
| 38 | GO:0009765: photosynthesis, light harvesting | 4.24E-04 |
| 39 | GO:0015994: chlorophyll metabolic process | 4.24E-04 |
| 40 | GO:0009416: response to light stimulus | 4.26E-04 |
| 41 | GO:0010027: thylakoid membrane organization | 4.83E-04 |
| 42 | GO:0010236: plastoquinone biosynthetic process | 5.39E-04 |
| 43 | GO:0016123: xanthophyll biosynthetic process | 5.39E-04 |
| 44 | GO:0050665: hydrogen peroxide biosynthetic process | 6.60E-04 |
| 45 | GO:0010264: myo-inositol hexakisphosphate biosynthetic process | 6.60E-04 |
| 46 | GO:0046855: inositol phosphate dephosphorylation | 6.60E-04 |
| 47 | GO:0009854: oxidative photosynthetic carbon pathway | 7.87E-04 |
| 48 | GO:0071470: cellular response to osmotic stress | 7.87E-04 |
| 49 | GO:0034599: cellular response to oxidative stress | 8.17E-04 |
| 50 | GO:0009704: de-etiolation | 1.06E-03 |
| 51 | GO:0031540: regulation of anthocyanin biosynthetic process | 1.06E-03 |
| 52 | GO:0009821: alkaloid biosynthetic process | 1.35E-03 |
| 53 | GO:0006754: ATP biosynthetic process | 1.35E-03 |
| 54 | GO:0009245: lipid A biosynthetic process | 1.35E-03 |
| 55 | GO:0009688: abscisic acid biosynthetic process | 1.67E-03 |
| 56 | GO:0043085: positive regulation of catalytic activity | 1.84E-03 |
| 57 | GO:0009698: phenylpropanoid metabolic process | 1.84E-03 |
| 58 | GO:0009773: photosynthetic electron transport in photosystem I | 1.84E-03 |
| 59 | GO:0009409: response to cold | 1.95E-03 |
| 60 | GO:0006108: malate metabolic process | 2.19E-03 |
| 61 | GO:0009735: response to cytokinin | 2.37E-03 |
| 62 | GO:0010207: photosystem II assembly | 2.38E-03 |
| 63 | GO:0009266: response to temperature stimulus | 2.38E-03 |
| 64 | GO:0019748: secondary metabolic process | 3.59E-03 |
| 65 | GO:0071215: cellular response to abscisic acid stimulus | 3.80E-03 |
| 66 | GO:0042335: cuticle development | 4.49E-03 |
| 67 | GO:0006662: glycerol ether metabolic process | 4.72E-03 |
| 68 | GO:0010182: sugar mediated signaling pathway | 4.72E-03 |
| 69 | GO:0009658: chloroplast organization | 4.91E-03 |
| 70 | GO:0006814: sodium ion transport | 4.96E-03 |
| 71 | GO:0008654: phospholipid biosynthetic process | 5.21E-03 |
| 72 | GO:0006979: response to oxidative stress | 6.55E-03 |
| 73 | GO:0051607: defense response to virus | 6.76E-03 |
| 74 | GO:0009627: systemic acquired resistance | 7.59E-03 |
| 75 | GO:0015995: chlorophyll biosynthetic process | 7.88E-03 |
| 76 | GO:0016311: dephosphorylation | 8.17E-03 |
| 77 | GO:0009813: flavonoid biosynthetic process | 8.76E-03 |
| 78 | GO:0009408: response to heat | 8.97E-03 |
| 79 | GO:0006099: tricarboxylic acid cycle | 1.03E-02 |
| 80 | GO:0006810: transport | 1.06E-02 |
| 81 | GO:0006631: fatty acid metabolic process | 1.13E-02 |
| 82 | GO:0042542: response to hydrogen peroxide | 1.16E-02 |
| 83 | GO:0009926: auxin polar transport | 1.19E-02 |
| 84 | GO:0006855: drug transmembrane transport | 1.33E-02 |
| 85 | GO:0031347: regulation of defense response | 1.37E-02 |
| 86 | GO:0006364: rRNA processing | 1.47E-02 |
| 87 | GO:0010224: response to UV-B | 1.51E-02 |
| 88 | GO:0055085: transmembrane transport | 2.03E-02 |
| 89 | GO:0009058: biosynthetic process | 2.31E-02 |
| 90 | GO:0006633: fatty acid biosynthetic process | 2.61E-02 |
| 91 | GO:0016036: cellular response to phosphate starvation | 2.66E-02 |
| 92 | GO:0006413: translational initiation | 2.66E-02 |
| 93 | GO:0006508: proteolysis | 2.68E-02 |
| 94 | GO:0007623: circadian rhythm | 2.79E-02 |
| 95 | GO:0042742: defense response to bacterium | 3.24E-02 |
| 96 | GO:0055114: oxidation-reduction process | 3.28E-02 |
| 97 | GO:0009733: response to auxin | 3.63E-02 |
| 98 | GO:0042254: ribosome biogenesis | 3.86E-02 |
| 99 | GO:0006970: response to osmotic stress | 4.02E-02 |
| 100 | GO:0080167: response to karrikin | 4.44E-02 |
| 101 | GO:0044550: secondary metabolite biosynthetic process | 4.71E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0016210: naringenin-chalcone synthase activity | 0.00E+00 |
| 2 | GO:0102550: 2-methyl-6-geranylgeranyl-1,4-benzoquinol methyltransferase activity | 0.00E+00 |
| 3 | GO:0048529: magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase activity | 0.00E+00 |
| 4 | GO:0009540: zeaxanthin epoxidase [overall] activity | 0.00E+00 |
| 5 | GO:0047652: allantoate deiminase activity | 0.00E+00 |
| 6 | GO:0046554: malate dehydrogenase (NADP+) activity | 0.00E+00 |
| 7 | GO:0016754: sinapoylglucose-malate O-sinapoyltransferase activity | 0.00E+00 |
| 8 | GO:0071522: ureidoglycine aminohydrolase activity | 0.00E+00 |
| 9 | GO:0009976: tocopherol cyclase activity | 0.00E+00 |
| 10 | GO:0016730: oxidoreductase activity, acting on iron-sulfur proteins as donors | 0.00E+00 |
| 11 | GO:0031409: pigment binding | 3.13E-13 |
| 12 | GO:0016168: chlorophyll binding | 4.74E-11 |
| 13 | GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity | 1.10E-05 |
| 14 | GO:0046872: metal ion binding | 1.77E-05 |
| 15 | GO:0008746: NAD(P)+ transhydrogenase activity | 5.18E-05 |
| 16 | GO:0051741: 2-methyl-6-phytyl-1,4-benzoquinone methyltransferase activity | 5.18E-05 |
| 17 | GO:0008124: 4-alpha-hydroxytetrahydrobiopterin dehydratase activity | 5.18E-05 |
| 18 | GO:0052832: inositol monophosphate 3-phosphatase activity | 1.27E-04 |
| 19 | GO:0047158: sinapoylglucose-sinapoylglucose O-sinapoyltransferase activity | 1.27E-04 |
| 20 | GO:0008934: inositol monophosphate 1-phosphatase activity | 1.27E-04 |
| 21 | GO:0052833: inositol monophosphate 4-phosphatase activity | 1.27E-04 |
| 22 | GO:0004512: inositol-3-phosphate synthase activity | 1.27E-04 |
| 23 | GO:0016853: isomerase activity | 2.91E-04 |
| 24 | GO:0052852: very-long-chain-(S)-2-hydroxy-acid oxidase activity | 3.17E-04 |
| 25 | GO:0008508: bile acid:sodium symporter activity | 3.17E-04 |
| 26 | GO:0052853: long-chain-(S)-2-hydroxy-long-chain-acid oxidase activity | 3.17E-04 |
| 27 | GO:0052854: medium-chain-(S)-2-hydroxy-acid oxidase activity | 3.17E-04 |
| 28 | GO:0008891: glycolate oxidase activity | 4.24E-04 |
| 29 | GO:0015250: water channel activity | 4.83E-04 |
| 30 | GO:0031177: phosphopantetheine binding | 6.60E-04 |
| 31 | GO:0016615: malate dehydrogenase activity | 6.60E-04 |
| 32 | GO:0000035: acyl binding | 7.87E-04 |
| 33 | GO:0030060: L-malate dehydrogenase activity | 7.87E-04 |
| 34 | GO:0004185: serine-type carboxypeptidase activity | 9.96E-04 |
| 35 | GO:0000036: ACP phosphopantetheine attachment site binding involved in fatty acid biosynthetic process | 1.06E-03 |
| 36 | GO:0008553: hydrogen-exporting ATPase activity, phosphorylative mechanism | 1.35E-03 |
| 37 | GO:0071949: FAD binding | 1.35E-03 |
| 38 | GO:0016844: strictosidine synthase activity | 1.50E-03 |
| 39 | GO:0008047: enzyme activator activity | 1.67E-03 |
| 40 | GO:0031072: heat shock protein binding | 2.19E-03 |
| 41 | GO:0003756: protein disulfide isomerase activity | 4.03E-03 |
| 42 | GO:0047134: protein-disulfide reductase activity | 4.26E-03 |
| 43 | GO:0004791: thioredoxin-disulfide reductase activity | 4.96E-03 |
| 44 | GO:0010181: FMN binding | 4.96E-03 |
| 45 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 5.97E-03 |
| 46 | GO:0008237: metallopeptidase activity | 6.49E-03 |
| 47 | GO:0008757: S-adenosylmethionine-dependent methyltransferase activity | 8.17E-03 |
| 48 | GO:0015238: drug transmembrane transporter activity | 8.76E-03 |
| 49 | GO:0016491: oxidoreductase activity | 9.20E-03 |
| 50 | GO:0003993: acid phosphatase activity | 1.03E-02 |
| 51 | GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups | 1.70E-02 |
| 52 | GO:0016874: ligase activity | 1.81E-02 |
| 53 | GO:0051082: unfolded protein binding | 1.89E-02 |
| 54 | GO:0015035: protein disulfide oxidoreductase activity | 1.93E-02 |
| 55 | GO:0015297: antiporter activity | 2.70E-02 |
| 56 | GO:0042802: identical protein binding | 3.31E-02 |
| 57 | GO:0005215: transporter activity | 3.58E-02 |
| 58 | GO:0008168: methyltransferase activity | 3.71E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009515: granal stacked thylakoid | 0.00E+00 |
| 2 | GO:0009535: chloroplast thylakoid membrane | 3.12E-21 |
| 3 | GO:0009507: chloroplast | 8.49E-21 |
| 4 | GO:0009534: chloroplast thylakoid | 9.69E-18 |
| 5 | GO:0009941: chloroplast envelope | 3.12E-14 |
| 6 | GO:0009579: thylakoid | 6.07E-13 |
| 7 | GO:0010287: plastoglobule | 1.29E-10 |
| 8 | GO:0009522: photosystem I | 9.65E-10 |
| 9 | GO:0009517: PSII associated light-harvesting complex II | 5.17E-09 |
| 10 | GO:0030076: light-harvesting complex | 1.03E-08 |
| 11 | GO:0009523: photosystem II | 1.26E-07 |
| 12 | GO:0009570: chloroplast stroma | 1.51E-05 |
| 13 | GO:0009782: photosystem I antenna complex | 5.18E-05 |
| 14 | GO:0009783: photosystem II antenna complex | 5.18E-05 |
| 15 | GO:0009706: chloroplast inner membrane | 1.68E-04 |
| 16 | GO:0009543: chloroplast thylakoid lumen | 2.30E-04 |
| 17 | GO:0016020: membrane | 9.16E-04 |
| 18 | GO:0031977: thylakoid lumen | 9.22E-04 |
| 19 | GO:0016021: integral component of membrane | 1.13E-03 |
| 20 | GO:0009654: photosystem II oxygen evolving complex | 3.16E-03 |
| 21 | GO:0019898: extrinsic component of membrane | 5.21E-03 |
| 22 | GO:0005783: endoplasmic reticulum | 6.77E-03 |
| 23 | GO:0005887: integral component of plasma membrane | 1.22E-02 |
| 24 | GO:0005623: cell | 2.26E-02 |
| 25 | GO:0009705: plant-type vacuole membrane | 2.79E-02 |
| 26 | GO:0046658: anchored component of plasma membrane | 3.41E-02 |
| 27 | GO:0031969: chloroplast membrane | 4.44E-02 |