Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT2G38500

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0090627: plant epidermal cell differentiation0.00E+00
2GO:0019323: pentose catabolic process0.00E+00
3GO:0010378: temperature compensation of the circadian clock0.00E+00
4GO:0010025: wax biosynthetic process2.58E-06
5GO:0042761: very long-chain fatty acid biosynthetic process5.14E-05
6GO:0044262: cellular carbohydrate metabolic process6.10E-05
7GO:0000023: maltose metabolic process6.10E-05
8GO:0000025: maltose catabolic process6.10E-05
9GO:0005976: polysaccharide metabolic process1.48E-04
10GO:0009052: pentose-phosphate shunt, non-oxidative branch3.65E-04
11GO:1902358: sulfate transmembrane transport3.65E-04
12GO:0043481: anthocyanin accumulation in tissues in response to UV light3.65E-04
13GO:0048825: cotyledon development3.87E-04
14GO:2000122: negative regulation of stomatal complex development4.88E-04
15GO:0042991: transcription factor import into nucleus4.88E-04
16GO:0010021: amylopectin biosynthetic process4.88E-04
17GO:0010037: response to carbon dioxide4.88E-04
18GO:0015976: carbon utilization4.88E-04
19GO:0010023: proanthocyanidin biosynthetic process4.88E-04
20GO:0006749: glutathione metabolic process4.88E-04
21GO:0006461: protein complex assembly6.19E-04
22GO:0048578: positive regulation of long-day photoperiodism, flowering6.19E-04
23GO:0006656: phosphatidylcholine biosynthetic process6.19E-04
24GO:0009913: epidermal cell differentiation7.57E-04
25GO:0000470: maturation of LSU-rRNA7.57E-04
26GO:0009407: toxin catabolic process8.40E-04
27GO:0008272: sulfate transport1.05E-03
28GO:0030091: protein repair1.21E-03
29GO:0015979: photosynthesis1.22E-03
30GO:0009636: response to toxic substance1.36E-03
31GO:0009827: plant-type cell wall modification1.38E-03
32GO:0009657: plastid organization1.38E-03
33GO:0006783: heme biosynthetic process1.55E-03
34GO:0006979: response to oxidative stress1.73E-03
35GO:0006782: protoporphyrinogen IX biosynthetic process1.92E-03
36GO:0048765: root hair cell differentiation2.12E-03
37GO:0030148: sphingolipid biosynthetic process2.12E-03
38GO:0005983: starch catabolic process2.32E-03
39GO:0016024: CDP-diacylglycerol biosynthetic process2.32E-03
40GO:0009718: anthocyanin-containing compound biosynthetic process2.52E-03
41GO:0010102: lateral root morphogenesis2.52E-03
42GO:0009409: response to cold2.70E-03
43GO:0009266: response to temperature stimulus2.74E-03
44GO:0010143: cutin biosynthetic process2.74E-03
45GO:0046686: response to cadmium ion3.34E-03
46GO:0051260: protein homooligomerization3.89E-03
47GO:0007623: circadian rhythm3.93E-03
48GO:0010017: red or far-red light signaling pathway4.15E-03
49GO:0070417: cellular response to cold4.92E-03
50GO:0042335: cuticle development5.19E-03
51GO:0042752: regulation of circadian rhythm5.74E-03
52GO:0019252: starch biosynthetic process6.03E-03
53GO:0000302: response to reactive oxygen species6.32E-03
54GO:0006355: regulation of transcription, DNA-templated6.80E-03
55GO:0006310: DNA recombination7.21E-03
56GO:0019760: glucosinolate metabolic process7.21E-03
57GO:0015995: chlorophyll biosynthetic process9.14E-03
58GO:0009817: defense response to fungus, incompatible interaction9.82E-03
59GO:0000160: phosphorelay signal transduction system1.02E-02
60GO:0010218: response to far red light1.05E-02
61GO:0010119: regulation of stomatal movement1.09E-02
62GO:0009631: cold acclimation1.09E-02
63GO:0006629: lipid metabolic process1.11E-02
64GO:0009637: response to blue light1.16E-02
65GO:0034599: cellular response to oxidative stress1.20E-02
66GO:0006631: fatty acid metabolic process1.31E-02
67GO:0042542: response to hydrogen peroxide1.35E-02
68GO:0009640: photomorphogenesis1.39E-02
69GO:0009644: response to high light intensity1.47E-02
70GO:0009736: cytokinin-activated signaling pathway1.71E-02
71GO:0009585: red, far-red light phototransduction1.71E-02
72GO:0006813: potassium ion transport1.71E-02
73GO:0009735: response to cytokinin1.81E-02
74GO:0009624: response to nematode2.20E-02
75GO:0016310: phosphorylation2.65E-02
76GO:0009058: biosynthetic process2.68E-02
77GO:0009845: seed germination2.73E-02
78GO:0042744: hydrogen peroxide catabolic process2.83E-02
79GO:0016567: protein ubiquitination3.46E-02
80GO:0009739: response to gibberellin3.52E-02
81GO:0006470: protein dephosphorylation3.57E-02
82GO:0010468: regulation of gene expression3.68E-02
83GO:0071555: cell wall organization4.00E-02
84GO:0009723: response to ethylene4.91E-02
85GO:0048366: leaf development4.97E-02
RankGO TermAdjusted P value
1GO:0102193: protein-ribulosamine 3-kinase activity0.00E+00
2GO:0052631: sphingolipid delta-8 desaturase activity6.10E-05
3GO:0004134: 4-alpha-glucanotransferase activity6.10E-05
4GO:0004105: choline-phosphate cytidylyltransferase activity6.10E-05
5GO:0047066: phospholipid-hydroperoxide glutathione peroxidase activity6.10E-05
6GO:0004853: uroporphyrinogen decarboxylase activity6.10E-05
7GO:0010297: heteropolysaccharide binding1.48E-04
8GO:0033201: alpha-1,4-glucan synthase activity1.48E-04
9GO:0004750: ribulose-phosphate 3-epimerase activity1.48E-04
10GO:0017108: 5'-flap endonuclease activity2.51E-04
11GO:0004373: glycogen (starch) synthase activity2.51E-04
12GO:0009011: starch synthase activity4.88E-04
13GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity7.57E-04
14GO:2001070: starch binding7.57E-04
15GO:0004130: cytochrome-c peroxidase activity7.57E-04
16GO:0004366: glycerol-3-phosphate O-acyltransferase activity7.57E-04
17GO:0004602: glutathione peroxidase activity9.01E-04
18GO:0033743: peptide-methionine (R)-S-oxide reductase activity9.01E-04
19GO:0004364: glutathione transferase activity1.17E-03
20GO:0016209: antioxidant activity1.21E-03
21GO:0008271: secondary active sulfate transmembrane transporter activity1.38E-03
22GO:0043565: sequence-specific DNA binding1.57E-03
23GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups1.97E-03
24GO:0047372: acylglycerol lipase activity2.12E-03
25GO:0015116: sulfate transmembrane transporter activity2.32E-03
26GO:0004089: carbonate dehydratase activity2.52E-03
27GO:0003700: transcription factor activity, sequence-specific DNA binding4.89E-03
28GO:0005249: voltage-gated potassium channel activity5.19E-03
29GO:0008536: Ran GTPase binding5.46E-03
30GO:0004518: nuclease activity6.61E-03
31GO:0000156: phosphorelay response regulator activity6.91E-03
32GO:0016791: phosphatase activity7.21E-03
33GO:0008375: acetylglucosaminyltransferase activity8.81E-03
34GO:0015293: symporter activity1.51E-02
35GO:0008289: lipid binding1.55E-02
36GO:0016874: ligase activity2.11E-02
37GO:0016746: transferase activity, transferring acyl groups2.25E-02
38GO:0016740: transferase activity2.41E-02
39GO:0019843: rRNA binding2.58E-02
40GO:0042626: ATPase activity, coupled to transmembrane movement of substances3.85E-02
41GO:0003677: DNA binding3.97E-02
42GO:0044212: transcription regulatory region DNA binding4.00E-02
43GO:0004601: peroxidase activity4.43E-02
44GO:0003682: chromatin binding4.61E-02
RankGO TermAdjusted P value
1GO:0033557: Slx1-Slx4 complex0.00E+00
2GO:0009535: chloroplast thylakoid membrane4.94E-05
3GO:0009579: thylakoid1.16E-04
4GO:0009534: chloroplast thylakoid1.18E-04
5GO:0009570: chloroplast stroma1.78E-04
6GO:0009941: chloroplast envelope3.38E-04
7GO:0008076: voltage-gated potassium channel complex3.65E-04
8GO:0010319: stromule5.29E-04
9GO:0000793: condensed chromosome7.57E-04
10GO:0000794: condensed nuclear chromosome1.05E-03
11GO:0009533: chloroplast stromal thylakoid1.05E-03
12GO:0031977: thylakoid lumen1.13E-03
13GO:0009501: amyloplast1.21E-03
14GO:0009538: photosystem I reaction center1.21E-03
15GO:0010287: plastoglobule2.71E-03
16GO:0030095: chloroplast photosystem II2.74E-03
17GO:0009543: chloroplast thylakoid lumen2.86E-03
18GO:0009523: photosystem II6.03E-03
19GO:0009507: chloroplast6.62E-03
20GO:0005634: nucleus2.12E-02
21GO:0009706: chloroplast inner membrane2.20E-02
22GO:0005654: nucleoplasm2.53E-02
23GO:0005783: endoplasmic reticulum3.19E-02
24GO:0005622: intracellular3.51E-02
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Gene type



Gene DE type