GO Enrichment Analysis of Co-expressed Genes with
AT2G38300
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0019500: cyanide catabolic process | 0.00E+00 |
| 2 | GO:0090239: regulation of histone H4 acetylation | 0.00E+00 |
| 3 | GO:0034050: host programmed cell death induced by symbiont | 0.00E+00 |
| 4 | GO:0007530: sex determination | 0.00E+00 |
| 5 | GO:0006412: translation | 1.27E-116 |
| 6 | GO:0042254: ribosome biogenesis | 1.10E-38 |
| 7 | GO:0000027: ribosomal large subunit assembly | 4.75E-12 |
| 8 | GO:0000028: ribosomal small subunit assembly | 4.69E-06 |
| 9 | GO:1902626: assembly of large subunit precursor of preribosome | 1.00E-05 |
| 10 | GO:0006820: anion transport | 2.75E-05 |
| 11 | GO:0006626: protein targeting to mitochondrion | 3.40E-05 |
| 12 | GO:0009735: response to cytokinin | 1.23E-04 |
| 13 | GO:0006407: rRNA export from nucleus | 2.43E-04 |
| 14 | GO:0051410: detoxification of nitrogen compound | 2.43E-04 |
| 15 | GO:0019499: cyanide metabolic process | 2.43E-04 |
| 16 | GO:0000461: endonucleolytic cleavage to generate mature 3'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 2.43E-04 |
| 17 | GO:0000447: endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 2.43E-04 |
| 18 | GO:0098656: anion transmembrane transport | 3.32E-04 |
| 19 | GO:0000387: spliceosomal snRNP assembly | 3.94E-04 |
| 20 | GO:0045859: regulation of protein kinase activity | 5.39E-04 |
| 21 | GO:0045905: positive regulation of translational termination | 5.39E-04 |
| 22 | GO:0045901: positive regulation of translational elongation | 5.39E-04 |
| 23 | GO:0048569: post-embryonic animal organ development | 5.39E-04 |
| 24 | GO:0043981: histone H4-K5 acetylation | 5.39E-04 |
| 25 | GO:0006452: translational frameshifting | 5.39E-04 |
| 26 | GO:0009793: embryo development ending in seed dormancy | 5.64E-04 |
| 27 | GO:0009150: purine ribonucleotide metabolic process | 8.75E-04 |
| 28 | GO:0002181: cytoplasmic translation | 8.75E-04 |
| 29 | GO:0042256: mature ribosome assembly | 8.75E-04 |
| 30 | GO:0006289: nucleotide-excision repair | 1.06E-03 |
| 31 | GO:0070301: cellular response to hydrogen peroxide | 1.25E-03 |
| 32 | GO:0006241: CTP biosynthetic process | 1.25E-03 |
| 33 | GO:0006165: nucleoside diphosphate phosphorylation | 1.25E-03 |
| 34 | GO:0006228: UTP biosynthetic process | 1.25E-03 |
| 35 | GO:0006164: purine nucleotide biosynthetic process | 1.25E-03 |
| 36 | GO:0042274: ribosomal small subunit biogenesis | 1.67E-03 |
| 37 | GO:0006183: GTP biosynthetic process | 1.67E-03 |
| 38 | GO:0006621: protein retention in ER lumen | 1.67E-03 |
| 39 | GO:0019408: dolichol biosynthetic process | 2.13E-03 |
| 40 | GO:0010183: pollen tube guidance | 2.40E-03 |
| 41 | GO:0000470: maturation of LSU-rRNA | 2.62E-03 |
| 42 | GO:0000398: mRNA splicing, via spliceosome | 3.01E-03 |
| 43 | GO:0006458: 'de novo' protein folding | 3.15E-03 |
| 44 | GO:0016444: somatic cell DNA recombination | 3.15E-03 |
| 45 | GO:0009955: adaxial/abaxial pattern specification | 3.15E-03 |
| 46 | GO:0009645: response to low light intensity stimulus | 3.72E-03 |
| 47 | GO:0006955: immune response | 3.72E-03 |
| 48 | GO:0006413: translational initiation | 4.60E-03 |
| 49 | GO:0010204: defense response signaling pathway, resistance gene-independent | 4.93E-03 |
| 50 | GO:0030968: endoplasmic reticulum unfolded protein response | 4.93E-03 |
| 51 | GO:0043562: cellular response to nitrogen levels | 4.93E-03 |
| 52 | GO:0006189: 'de novo' IMP biosynthetic process | 5.59E-03 |
| 53 | GO:0009060: aerobic respiration | 5.59E-03 |
| 54 | GO:0009245: lipid A biosynthetic process | 5.59E-03 |
| 55 | GO:0009617: response to bacterium | 6.30E-03 |
| 56 | GO:0006535: cysteine biosynthetic process from serine | 6.99E-03 |
| 57 | GO:0052544: defense response by callose deposition in cell wall | 7.73E-03 |
| 58 | GO:0008283: cell proliferation | 7.90E-03 |
| 59 | GO:0006790: sulfur compound metabolic process | 8.49E-03 |
| 60 | GO:0012501: programmed cell death | 8.49E-03 |
| 61 | GO:0009644: response to high light intensity | 8.55E-03 |
| 62 | GO:0010628: positive regulation of gene expression | 9.29E-03 |
| 63 | GO:2000028: regulation of photoperiodism, flowering | 9.29E-03 |
| 64 | GO:0010102: lateral root morphogenesis | 9.29E-03 |
| 65 | GO:0006446: regulation of translational initiation | 1.01E-02 |
| 66 | GO:0048467: gynoecium development | 1.01E-02 |
| 67 | GO:0080147: root hair cell development | 1.27E-02 |
| 68 | GO:0006487: protein N-linked glycosylation | 1.27E-02 |
| 69 | GO:0019344: cysteine biosynthetic process | 1.27E-02 |
| 70 | GO:0030150: protein import into mitochondrial matrix | 1.27E-02 |
| 71 | GO:0006334: nucleosome assembly | 1.46E-02 |
| 72 | GO:0061077: chaperone-mediated protein folding | 1.46E-02 |
| 73 | GO:0007005: mitochondrion organization | 1.56E-02 |
| 74 | GO:0009409: response to cold | 1.61E-02 |
| 75 | GO:0040007: growth | 1.66E-02 |
| 76 | GO:0006633: fatty acid biosynthetic process | 2.40E-02 |
| 77 | GO:0048510: regulation of timing of transition from vegetative to reproductive phase | 2.41E-02 |
| 78 | GO:0019761: glucosinolate biosynthetic process | 2.52E-02 |
| 79 | GO:0042742: defense response to bacterium | 3.06E-02 |
| 80 | GO:0010029: regulation of seed germination | 3.26E-02 |
| 81 | GO:0042128: nitrate assimilation | 3.39E-02 |
| 82 | GO:0006811: ion transport | 4.05E-02 |
| 83 | GO:0000724: double-strand break repair via homologous recombination | 4.33E-02 |
| 84 | GO:0009860: pollen tube growth | 4.38E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0047251: thiohydroximate beta-D-glucosyltransferase activity | 0.00E+00 |
| 2 | GO:0103102: UDP-glucose:8-methylthiooctylhydroximate S-glucosyltransferase activity | 0.00E+00 |
| 3 | GO:0103100: UDP-glucose: 6-methylthiohexylhydroximate S-glucosyltransferase activity | 0.00E+00 |
| 4 | GO:0102659: UDP-glucose: 4-methylthiobutylhydroximate S-glucosyltransferase activity | 0.00E+00 |
| 5 | GO:0016639: oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor | 0.00E+00 |
| 6 | GO:0103099: UDP-glucose:5-methylthiopentylhydroximate S-glucosyltransferase activity | 0.00E+00 |
| 7 | GO:0103101: UDP-glucose:7-methylthioheptylhydroximate S-glucosyltransferase activity | 0.00E+00 |
| 8 | GO:0004641: phosphoribosylformylglycinamidine cyclo-ligase activity | 0.00E+00 |
| 9 | GO:0005212: structural constituent of eye lens | 0.00E+00 |
| 10 | GO:0103103: UDP-glucose: 9-methylthiononylhydroximate S-glucosyltransferase activity | 0.00E+00 |
| 11 | GO:0003735: structural constituent of ribosome | 1.63E-136 |
| 12 | GO:0003729: mRNA binding | 1.24E-23 |
| 13 | GO:0019843: rRNA binding | 5.32E-16 |
| 14 | GO:0015288: porin activity | 4.19E-08 |
| 15 | GO:0008308: voltage-gated anion channel activity | 6.80E-06 |
| 16 | GO:0003746: translation elongation factor activity | 8.48E-05 |
| 17 | GO:0043022: ribosome binding | 2.22E-04 |
| 18 | GO:0047326: inositol tetrakisphosphate 5-kinase activity | 2.43E-04 |
| 19 | GO:0000823: inositol-1,4,5-trisphosphate 6-kinase activity | 2.43E-04 |
| 20 | GO:0005080: protein kinase C binding | 2.43E-04 |
| 21 | GO:0008440: inositol-1,4,5-trisphosphate 3-kinase activity | 2.43E-04 |
| 22 | GO:0035614: snRNA stem-loop binding | 2.43E-04 |
| 23 | GO:0000824: inositol tetrakisphosphate 3-kinase activity | 2.43E-04 |
| 24 | GO:0004679: AMP-activated protein kinase activity | 2.43E-04 |
| 25 | GO:0044183: protein binding involved in protein folding | 5.33E-04 |
| 26 | GO:0030619: U1 snRNA binding | 5.39E-04 |
| 27 | GO:0050017: L-3-cyanoalanine synthase activity | 5.39E-04 |
| 28 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 5.99E-04 |
| 29 | GO:0070180: large ribosomal subunit rRNA binding | 8.75E-04 |
| 30 | GO:0004550: nucleoside diphosphate kinase activity | 1.25E-03 |
| 31 | GO:0047627: adenylylsulfatase activity | 1.25E-03 |
| 32 | GO:0008097: 5S rRNA binding | 1.25E-03 |
| 33 | GO:0070628: proteasome binding | 1.67E-03 |
| 34 | GO:0046923: ER retention sequence binding | 1.67E-03 |
| 35 | GO:0045547: dehydrodolichyl diphosphate synthase activity | 2.13E-03 |
| 36 | GO:0031593: polyubiquitin binding | 2.62E-03 |
| 37 | GO:0031177: phosphopantetheine binding | 2.62E-03 |
| 38 | GO:0000035: acyl binding | 3.15E-03 |
| 39 | GO:0019887: protein kinase regulator activity | 3.15E-03 |
| 40 | GO:0004124: cysteine synthase activity | 3.15E-03 |
| 41 | GO:0051920: peroxiredoxin activity | 3.15E-03 |
| 42 | GO:0016209: antioxidant activity | 4.31E-03 |
| 43 | GO:0000036: ACP phosphopantetheine attachment site binding involved in fatty acid biosynthetic process | 4.31E-03 |
| 44 | GO:0003723: RNA binding | 5.25E-03 |
| 45 | GO:0001055: RNA polymerase II activity | 6.27E-03 |
| 46 | GO:0001054: RNA polymerase I activity | 7.73E-03 |
| 47 | GO:0001056: RNA polymerase III activity | 8.49E-03 |
| 48 | GO:0015266: protein channel activity | 9.29E-03 |
| 49 | GO:0051536: iron-sulfur cluster binding | 1.27E-02 |
| 50 | GO:0043130: ubiquitin binding | 1.27E-02 |
| 51 | GO:0005216: ion channel activity | 1.37E-02 |
| 52 | GO:0051082: unfolded protein binding | 1.52E-02 |
| 53 | GO:0004872: receptor activity | 2.29E-02 |
| 54 | GO:0003684: damaged DNA binding | 2.76E-02 |
| 55 | GO:0003743: translation initiation factor activity | 3.08E-02 |
| 56 | GO:0008236: serine-type peptidase activity | 3.65E-02 |
| 57 | GO:0050897: cobalt ion binding | 4.19E-02 |
| 58 | GO:0003993: acid phosphatase activity | 4.62E-02 |
| 59 | GO:0042393: histone binding | 4.91E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0043186: P granule | 0.00E+00 |
| 2 | GO:0005675: holo TFIIH complex | 0.00E+00 |
| 3 | GO:0005832: chaperonin-containing T-complex | 0.00E+00 |
| 4 | GO:0005840: ribosome | 4.74E-94 |
| 5 | GO:0022625: cytosolic large ribosomal subunit | 1.03E-83 |
| 6 | GO:0022626: cytosolic ribosome | 4.43E-67 |
| 7 | GO:0022627: cytosolic small ribosomal subunit | 8.54E-56 |
| 8 | GO:0005737: cytoplasm | 7.24E-30 |
| 9 | GO:0005829: cytosol | 7.01E-23 |
| 10 | GO:0005730: nucleolus | 1.16E-21 |
| 11 | GO:0009506: plasmodesma | 7.09E-15 |
| 12 | GO:0015934: large ribosomal subunit | 1.94E-12 |
| 13 | GO:0005774: vacuolar membrane | 9.44E-12 |
| 14 | GO:0015935: small ribosomal subunit | 1.08E-11 |
| 15 | GO:0046930: pore complex | 7.09E-08 |
| 16 | GO:0005618: cell wall | 1.03E-07 |
| 17 | GO:0005773: vacuole | 6.94E-07 |
| 18 | GO:0005886: plasma membrane | 8.26E-06 |
| 19 | GO:0005853: eukaryotic translation elongation factor 1 complex | 1.00E-05 |
| 20 | GO:0016020: membrane | 1.10E-05 |
| 21 | GO:0009507: chloroplast | 6.47E-05 |
| 22 | GO:0005741: mitochondrial outer membrane | 9.43E-05 |
| 23 | GO:0030686: 90S preribosome | 2.43E-04 |
| 24 | GO:0005685: U1 snRNP | 3.32E-04 |
| 25 | GO:0035145: exon-exon junction complex | 5.39E-04 |
| 26 | GO:0019013: viral nucleocapsid | 6.91E-04 |
| 27 | GO:0034719: SMN-Sm protein complex | 8.75E-04 |
| 28 | GO:0000439: core TFIIH complex | 8.75E-04 |
| 29 | GO:0005758: mitochondrial intermembrane space | 1.06E-03 |
| 30 | GO:0005682: U5 snRNP | 1.67E-03 |
| 31 | GO:0005687: U4 snRNP | 2.13E-03 |
| 32 | GO:0097526: spliceosomal tri-snRNP complex | 2.13E-03 |
| 33 | GO:0005689: U12-type spliceosomal complex | 3.15E-03 |
| 34 | GO:0016272: prefoldin complex | 3.15E-03 |
| 35 | GO:0005762: mitochondrial large ribosomal subunit | 3.15E-03 |
| 36 | GO:0031359: integral component of chloroplast outer membrane | 3.72E-03 |
| 37 | GO:0071004: U2-type prespliceosome | 4.31E-03 |
| 38 | GO:0005742: mitochondrial outer membrane translocase complex | 4.93E-03 |
| 39 | GO:0005736: DNA-directed RNA polymerase I complex | 5.59E-03 |
| 40 | GO:0005666: DNA-directed RNA polymerase III complex | 6.27E-03 |
| 41 | GO:0071011: precatalytic spliceosome | 6.27E-03 |
| 42 | GO:0015030: Cajal body | 6.27E-03 |
| 43 | GO:0005686: U2 snRNP | 6.99E-03 |
| 44 | GO:0000418: DNA-directed RNA polymerase IV complex | 6.99E-03 |
| 45 | GO:0005622: intracellular | 7.61E-03 |
| 46 | GO:0071013: catalytic step 2 spliceosome | 7.73E-03 |
| 47 | GO:0048471: perinuclear region of cytoplasm | 7.73E-03 |
| 48 | GO:0005852: eukaryotic translation initiation factor 3 complex | 7.73E-03 |
| 49 | GO:0005665: DNA-directed RNA polymerase II, core complex | 8.49E-03 |
| 50 | GO:0000419: DNA-directed RNA polymerase V complex | 1.18E-02 |
| 51 | GO:0005681: spliceosomal complex | 1.26E-02 |
| 52 | GO:0070469: respiratory chain | 1.37E-02 |
| 53 | GO:0005732: small nucleolar ribonucleoprotein complex | 1.66E-02 |
| 54 | GO:0005743: mitochondrial inner membrane | 1.73E-02 |
| 55 | GO:0005654: nucleoplasm | 1.86E-02 |
| 56 | GO:0030529: intracellular ribonucleoprotein complex | 3.13E-02 |
| 57 | GO:0009536: plastid | 4.11E-02 |