co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT2G38290

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0019481: L-alanine catabolic process, by transamination	0.00E+00
2	GO:0032497: detection of lipopolysaccharide	0.00E+00
3	GO:2000636: positive regulation of primary miRNA processing	0.00E+00
4	GO:0010046: response to mycotoxin	0.00E+00
5	GO:0035420: MAPK cascade involved in innate immune response	0.00E+00
6	GO:0009560: embryo sac egg cell differentiation	0.00E+00
7	GO:2000630: positive regulation of miRNA metabolic process	0.00E+00
8	GO:0080050: regulation of seed development	0.00E+00
9	GO:0007141: male meiosis I	0.00E+00
10	GO:0010200: response to chitin	1.51E-08
11	GO:0010337: regulation of salicylic acid metabolic process	6.73E-05
12	GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway	1.24E-04
13	GO:0006955: immune response	1.24E-04
14	GO:2000070: regulation of response to water deprivation	1.59E-04
15	GO:1900150: regulation of defense response to fungus	1.59E-04
16	GO:0051180: vitamin transport	1.95E-04
17	GO:0030974: thiamine pyrophosphate transport	1.95E-04
18	GO:0050691: regulation of defense response to virus by host	1.95E-04
19	GO:0034628: 'de novo' NAD biosynthetic process from aspartate	1.95E-04
20	GO:0006904: vesicle docking involved in exocytosis	2.41E-04
21	GO:0008219: cell death	4.01E-04
22	GO:0052542: defense response by callose deposition	4.38E-04
23	GO:2000071: regulation of defense response by callose deposition	4.38E-04
24	GO:0046740: transport of virus in host, cell to cell	4.38E-04
25	GO:2000030: regulation of response to red or far red light	4.38E-04
26	GO:0015893: drug transport	4.38E-04
27	GO:0070588: calcium ion transmembrane transport	6.42E-04
28	GO:0006887: exocytosis	6.75E-04
29	GO:0006470: protein dephosphorylation	7.00E-04
30	GO:0007166: cell surface receptor signaling pathway	7.00E-04
31	GO:0080168: abscisic acid transport	7.14E-04
32	GO:0042344: indole glucosinolate catabolic process	7.14E-04
33	GO:0051176: positive regulation of sulfur metabolic process	7.14E-04
34	GO:0045793: positive regulation of cell size	7.14E-04
35	GO:0006598: polyamine catabolic process	7.14E-04
36	GO:0006468: protein phosphorylation	8.01E-04
37	GO:0006855: drug transmembrane transport	9.06E-04
38	GO:0033014: tetrapyrrole biosynthetic process	1.02E-03
39	GO:0071323: cellular response to chitin	1.02E-03
40	GO:0010071: root meristem specification	1.02E-03
41	GO:0034219: carbohydrate transmembrane transport	1.02E-03
42	GO:0030100: regulation of endocytosis	1.02E-03
43	GO:0010107: potassium ion import	1.35E-03
44	GO:0001709: cell fate determination	1.35E-03
45	GO:1902347: response to strigolactone	1.35E-03
46	GO:0009694: jasmonic acid metabolic process	1.35E-03
47	GO:0006536: glutamate metabolic process	1.35E-03
48	GO:0009626: plant-type hypersensitive response	1.44E-03
49	GO:0042742: defense response to bacterium	1.50E-03
50	GO:0045038: protein import into chloroplast thylakoid membrane	1.72E-03
51	GO:0009435: NAD biosynthetic process	1.72E-03
52	GO:0009164: nucleoside catabolic process	1.72E-03
53	GO:0009742: brassinosteroid mediated signaling pathway	1.81E-03
54	GO:0010193: response to ozone	1.89E-03
55	GO:0002229: defense response to oomycetes	1.89E-03
56	GO:0006796: phosphate-containing compound metabolic process	2.12E-03
57	GO:0047484: regulation of response to osmotic stress	2.12E-03
58	GO:0006751: glutathione catabolic process	2.12E-03
59	GO:0048232: male gamete generation	2.12E-03
60	GO:0006952: defense response	2.34E-03
61	GO:0080113: regulation of seed growth	2.54E-03
62	GO:0009861: jasmonic acid and ethylene-dependent systemic resistance	2.54E-03
63	GO:1901001: negative regulation of response to salt stress	2.54E-03
64	GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response	2.54E-03
65	GO:0010161: red light signaling pathway	3.00E-03
66	GO:0010078: maintenance of root meristem identity	3.47E-03
67	GO:0048658: anther wall tapetum development	3.47E-03
68	GO:0010492: maintenance of shoot apical meristem identity	3.47E-03
69	GO:0006811: ion transport	3.89E-03
70	GO:0006783: heme biosynthetic process	4.49E-03
71	GO:0009060: aerobic respiration	4.49E-03
72	GO:0098656: anion transmembrane transport	4.49E-03
73	GO:0006779: porphyrin-containing compound biosynthetic process	5.04E-03
74	GO:0006782: protoporphyrinogen IX biosynthetic process	5.61E-03
75	GO:0051026: chiasma assembly	5.61E-03
76	GO:0019538: protein metabolic process	5.61E-03
77	GO:0010015: root morphogenesis	6.20E-03
78	GO:0009682: induced systemic resistance	6.20E-03
79	GO:0052544: defense response by callose deposition in cell wall	6.20E-03
80	GO:0010105: negative regulation of ethylene-activated signaling pathway	6.81E-03
81	GO:0071365: cellular response to auxin stimulus	6.81E-03
82	GO:0009611: response to wounding	6.81E-03
83	GO:0031347: regulation of defense response	6.97E-03
84	GO:0048467: gynoecium development	8.10E-03
85	GO:0002237: response to molecule of bacterial origin	8.10E-03
86	GO:0046777: protein autophosphorylation	8.38E-03
87	GO:0071732: cellular response to nitric oxide	8.77E-03
88	GO:0046854: phosphatidylinositol phosphorylation	8.77E-03
89	GO:0080188: RNA-directed DNA methylation	8.77E-03
90	GO:2000377: regulation of reactive oxygen species metabolic process	1.02E-02
91	GO:0009863: salicylic acid mediated signaling pathway	1.02E-02
92	GO:0098542: defense response to other organism	1.17E-02
93	GO:0016226: iron-sulfur cluster assembly	1.24E-02
94	GO:0007131: reciprocal meiotic recombination	1.24E-02
95	GO:0030433: ubiquitin-dependent ERAD pathway	1.24E-02
96	GO:0031348: negative regulation of defense response	1.24E-02
97	GO:0030245: cellulose catabolic process	1.24E-02
98	GO:0010017: red or far-red light signaling pathway	1.24E-02
99	GO:0035428: hexose transmembrane transport	1.24E-02
100	GO:0000398: mRNA splicing, via spliceosome	1.28E-02
101	GO:0071369: cellular response to ethylene stimulus	1.32E-02
102	GO:0006817: phosphate ion transport	1.40E-02
103	GO:0010091: trichome branching	1.40E-02
104	GO:0010089: xylem development	1.40E-02
105	GO:0019722: calcium-mediated signaling	1.40E-02
106	GO:0042147: retrograde transport, endosome to Golgi	1.48E-02
107	GO:0080022: primary root development	1.57E-02
108	GO:0010118: stomatal movement	1.57E-02
109	GO:0046323: glucose import	1.65E-02
110	GO:0009960: endosperm development	1.65E-02
111	GO:0048544: recognition of pollen	1.74E-02
112	GO:0009873: ethylene-activated signaling pathway	1.75E-02
113	GO:0009749: response to glucose	1.83E-02
114	GO:0009737: response to abscisic acid	2.02E-02
115	GO:0010090: trichome morphogenesis	2.11E-02
116	GO:1901657: glycosyl compound metabolic process	2.11E-02
117	GO:0071281: cellular response to iron ion	2.11E-02
118	GO:0006310: DNA recombination	2.20E-02
119	GO:0019760: glucosinolate metabolic process	2.20E-02
120	GO:0010468: regulation of gene expression	2.29E-02
121	GO:0007267: cell-cell signaling	2.30E-02
122	GO:0009738: abscisic acid-activated signaling pathway	2.50E-02
123	GO:0001666: response to hypoxia	2.50E-02
124	GO:0009615: response to virus	2.50E-02
125	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	2.60E-02
126	GO:0009555: pollen development	2.61E-02
127	GO:0009627: systemic acquired resistance	2.70E-02
128	GO:0015995: chlorophyll biosynthetic process	2.80E-02
129	GO:0016049: cell growth	2.91E-02
130	GO:0048481: plant ovule development	3.02E-02
131	GO:0009817: defense response to fungus, incompatible interaction	3.02E-02
132	GO:0009813: flavonoid biosynthetic process	3.12E-02
133	GO:0006970: response to osmotic stress	3.20E-02
134	GO:0010119: regulation of stomatal movement	3.34E-02
135	GO:0045087: innate immune response	3.57E-02
136	GO:0009637: response to blue light	3.57E-02
137	GO:0046686: response to cadmium ion	3.67E-02
138	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	3.80E-02
139	GO:0006839: mitochondrial transport	3.92E-02
140	GO:0006897: endocytosis	4.03E-02
141	GO:0009640: photomorphogenesis	4.27E-02
142	GO:0051707: response to other organism	4.27E-02
143	GO:0042546: cell wall biogenesis	4.40E-02
144	GO:0045892: negative regulation of transcription, DNA-templated	4.46E-02
145	GO:0006260: DNA replication	4.89E-02

Rank	GO Term	Adjusted P value
1	GO:0030621: U4 snRNA binding	0.00E+00
2	GO:0080123: jasmonate-amino synthetase activity	0.00E+00
3	GO:0032442: phenylcoumaran benzylic ether reductase activity	0.00E+00
4	GO:0010857: calcium-dependent protein kinase activity	0.00E+00
5	GO:0070566: adenylyltransferase activity	0.00E+00
6	GO:0008987: quinolinate synthetase A activity	0.00E+00
7	GO:0090440: abscisic acid transporter activity	1.95E-04
8	GO:0052894: norspermine:oxygen oxidoreductase activity	1.95E-04
9	GO:0090422: thiamine pyrophosphate transporter activity	1.95E-04
10	GO:0015085: calcium ion transmembrane transporter activity	1.95E-04
11	GO:0052895: N1-acetylspermine:oxygen oxidoreductase (N1-acetylspermidine-forming) activity	1.95E-04
12	GO:0016301: kinase activity	2.27E-04
13	GO:0005524: ATP binding	3.62E-04
14	GO:0015238: drug transmembrane transporter activity	4.27E-04
15	GO:0043141: ATP-dependent 5'-3' DNA helicase activity	4.38E-04
16	GO:0004103: choline kinase activity	4.38E-04
17	GO:0008883: glutamyl-tRNA reductase activity	4.38E-04
18	GO:0001047: core promoter binding	4.38E-04
19	GO:0052901: spermine:oxygen oxidoreductase (spermidine-forming) activity	4.38E-04
20	GO:0005388: calcium-transporting ATPase activity	5.09E-04
21	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	5.13E-04
22	GO:0004674: protein serine/threonine kinase activity	6.06E-04
23	GO:0003840: gamma-glutamyltransferase activity	7.14E-04
24	GO:0036374: glutathione hydrolase activity	7.14E-04
25	GO:0046592: polyamine oxidase activity	7.14E-04
26	GO:0005516: calmodulin binding	8.40E-04
27	GO:0004351: glutamate decarboxylase activity	1.02E-03
28	GO:0016756: glutathione gamma-glutamylcysteinyltransferase activity	1.02E-03
29	GO:0000285: 1-phosphatidylinositol-3-phosphate 5-kinase activity	1.02E-03
30	GO:0004021: L-alanine:2-oxoglutarate aminotransferase activity	1.02E-03
31	GO:0018685: alkane 1-monooxygenase activity	1.72E-03
32	GO:0047631: ADP-ribose diphosphatase activity	1.72E-03
33	GO:0002020: protease binding	1.72E-03
34	GO:0017070: U6 snRNA binding	1.72E-03
35	GO:0045431: flavonol synthase activity	1.72E-03
36	GO:0009922: fatty acid elongase activity	1.72E-03
37	GO:0000210: NAD+ diphosphatase activity	2.12E-03
38	GO:0019137: thioglucosidase activity	2.12E-03
39	GO:0016462: pyrophosphatase activity	2.12E-03
40	GO:0004709: MAP kinase kinase kinase activity	2.12E-03
41	GO:0035673: oligopeptide transmembrane transporter activity	2.12E-03
42	GO:0004722: protein serine/threonine phosphatase activity	2.31E-03
43	GO:0019900: kinase binding	2.54E-03
44	GO:0051020: GTPase binding	2.54E-03
45	GO:0016818: hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	2.54E-03
46	GO:0019899: enzyme binding	3.00E-03
47	GO:0008143: poly(A) binding	3.00E-03
48	GO:0004427: inorganic diphosphatase activity	3.00E-03
49	GO:0015297: antiporter activity	3.17E-03
50	GO:0004721: phosphoprotein phosphatase activity	3.19E-03
51	GO:0102483: scopolin beta-glucosidase activity	3.19E-03
52	GO:0004714: transmembrane receptor protein tyrosine kinase activity	3.47E-03
53	GO:0004430: 1-phosphatidylinositol 4-kinase activity	3.97E-03
54	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	4.08E-03
55	GO:0003678: DNA helicase activity	4.49E-03
56	GO:0005509: calcium ion binding	4.75E-03
57	GO:0008422: beta-glucosidase activity	4.88E-03
58	GO:0016308: 1-phosphatidylinositol-4-phosphate 5-kinase activity	5.61E-03
59	GO:0008047: enzyme activator activity	5.61E-03
60	GO:0004713: protein tyrosine kinase activity	5.61E-03
61	GO:0015198: oligopeptide transporter activity	6.81E-03
62	GO:0005315: inorganic phosphate transmembrane transporter activity	7.44E-03
63	GO:0019888: protein phosphatase regulator activity	7.44E-03
64	GO:0008131: primary amine oxidase activity	8.10E-03
65	GO:0031625: ubiquitin protein ligase binding	8.59E-03
66	GO:0051119: sugar transmembrane transporter activity	8.77E-03
67	GO:0102337: 3-oxo-cerotoyl-CoA synthase activity	9.46E-03
68	GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity	9.46E-03
69	GO:0102336: 3-oxo-arachidoyl-CoA synthase activity	9.46E-03
70	GO:0043424: protein histidine kinase binding	1.09E-02
71	GO:0033612: receptor serine/threonine kinase binding	1.17E-02
72	GO:0019706: protein-cysteine S-palmitoyltransferase activity	1.17E-02
73	GO:0043565: sequence-specific DNA binding	1.39E-02
74	GO:0008514: organic anion transmembrane transporter activity	1.40E-02
75	GO:0015144: carbohydrate transmembrane transporter activity	1.66E-02
76	GO:0005355: glucose transmembrane transporter activity	1.74E-02
77	GO:0005351: sugar:proton symporter activity	1.87E-02
78	GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity	2.30E-02
79	GO:0009931: calcium-dependent protein serine/threonine kinase activity	2.70E-02
80	GO:0004683: calmodulin-dependent protein kinase activity	2.80E-02
81	GO:0046982: protein heterodimerization activity	2.91E-02
82	GO:0050660: flavin adenine dinucleotide binding	3.43E-02
83	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	3.68E-02
84	GO:0051539: 4 iron, 4 sulfur cluster binding	3.92E-02
85	GO:0050661: NADP binding	3.92E-02
86	GO:0042803: protein homodimerization activity	4.60E-02

Rank	GO Term	Adjusted P value
1	GO:0005886: plasma membrane	2.90E-08
2	GO:0000145: exocyst	1.86E-04
3	GO:0080085: signal recognition particle, chloroplast targeting	4.38E-04
4	GO:0070062: extracellular exosome	1.02E-03
5	GO:0010008: endosome membrane	1.39E-03
6	GO:0016363: nuclear matrix	2.54E-03
7	GO:0046540: U4/U6 x U5 tri-snRNP complex	3.97E-03
8	GO:0010494: cytoplasmic stress granule	4.49E-03
9	GO:0005768: endosome	4.55E-03
10	GO:0015030: Cajal body	5.04E-03
11	GO:0016604: nuclear body	5.04E-03
12	GO:0031902: late endosome membrane	5.31E-03
13	GO:0000159: protein phosphatase type 2A complex	6.20E-03
14	GO:0005681: spliceosomal complex	9.17E-03
15	GO:0043234: protein complex	9.46E-03
16	GO:0000790: nuclear chromatin	1.48E-02
17	GO:0005770: late endosome	1.65E-02
18	GO:0005887: integral component of plasma membrane	1.86E-02
19	GO:0005778: peroxisomal membrane	2.30E-02
20	GO:0005777: peroxisome	3.09E-02
21	GO:0016021: integral component of membrane	3.92E-02
22	GO:0090406: pollen tube	4.27E-02