GO Enrichment Analysis of Co-expressed Genes with
AT2G37990
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0039694: viral RNA genome replication | 0.00E+00 |
| 2 | GO:0090069: regulation of ribosome biogenesis | 0.00E+00 |
| 3 | GO:1902184: negative regulation of shoot apical meristem development | 0.00E+00 |
| 4 | GO:0000463: maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 0.00E+00 |
| 5 | GO:0000466: maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 0.00E+00 |
| 6 | GO:0006364: rRNA processing | 3.02E-14 |
| 7 | GO:0000462: maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 1.16E-07 |
| 8 | GO:0010501: RNA secondary structure unwinding | 1.64E-05 |
| 9 | GO:0009553: embryo sac development | 2.34E-05 |
| 10 | GO:0000028: ribosomal small subunit assembly | 3.94E-05 |
| 11 | GO:0009451: RNA modification | 7.42E-05 |
| 12 | GO:0000469: cleavage involved in rRNA processing | 7.90E-05 |
| 13 | GO:0030490: maturation of SSU-rRNA | 7.90E-05 |
| 14 | GO:2000232: regulation of rRNA processing | 7.90E-05 |
| 15 | GO:0043985: histone H4-R3 methylation | 7.90E-05 |
| 16 | GO:0042254: ribosome biogenesis | 1.60E-04 |
| 17 | GO:0006421: asparaginyl-tRNA aminoacylation | 3.17E-04 |
| 18 | GO:0045604: regulation of epidermal cell differentiation | 3.17E-04 |
| 19 | GO:0007276: gamete generation | 4.58E-04 |
| 20 | GO:0000460: maturation of 5.8S rRNA | 6.09E-04 |
| 21 | GO:0006479: protein methylation | 6.09E-04 |
| 22 | GO:1900864: mitochondrial RNA modification | 6.09E-04 |
| 23 | GO:0046345: abscisic acid catabolic process | 6.09E-04 |
| 24 | GO:0042273: ribosomal large subunit biogenesis | 6.09E-04 |
| 25 | GO:0000470: maturation of LSU-rRNA | 9.42E-04 |
| 26 | GO:0000741: karyogamy | 9.42E-04 |
| 27 | GO:0030488: tRNA methylation | 1.12E-03 |
| 28 | GO:0048444: floral organ morphogenesis | 1.12E-03 |
| 29 | GO:0010077: maintenance of inflorescence meristem identity | 1.12E-03 |
| 30 | GO:0045995: regulation of embryonic development | 1.31E-03 |
| 31 | GO:0009396: folic acid-containing compound biosynthetic process | 1.31E-03 |
| 32 | GO:0042255: ribosome assembly | 1.51E-03 |
| 33 | GO:0006261: DNA-dependent DNA replication | 1.72E-03 |
| 34 | GO:2000024: regulation of leaf development | 1.95E-03 |
| 35 | GO:0006349: regulation of gene expression by genetic imprinting | 2.18E-03 |
| 36 | GO:0035999: tetrahydrofolate interconversion | 2.18E-03 |
| 37 | GO:1900865: chloroplast RNA modification | 2.18E-03 |
| 38 | GO:0010162: seed dormancy process | 2.41E-03 |
| 39 | GO:0010582: floral meristem determinacy | 2.92E-03 |
| 40 | GO:0010030: positive regulation of seed germination | 3.73E-03 |
| 41 | GO:0009944: polarity specification of adaxial/abaxial axis | 4.31E-03 |
| 42 | GO:0051302: regulation of cell division | 4.61E-03 |
| 43 | GO:0006730: one-carbon metabolic process | 5.24E-03 |
| 44 | GO:0009294: DNA mediated transformation | 5.56E-03 |
| 45 | GO:0009561: megagametogenesis | 5.89E-03 |
| 46 | GO:0010197: polar nucleus fusion | 6.92E-03 |
| 47 | GO:0009960: endosperm development | 6.92E-03 |
| 48 | GO:0048825: cotyledon development | 7.64E-03 |
| 49 | GO:0009793: embryo development ending in seed dormancy | 1.03E-02 |
| 50 | GO:0006412: translation | 1.09E-02 |
| 51 | GO:0009853: photorespiration | 1.48E-02 |
| 52 | GO:0006417: regulation of translation | 2.35E-02 |
| 53 | GO:0016569: covalent chromatin modification | 2.69E-02 |
| 54 | GO:0009555: pollen development | 2.79E-02 |
| 55 | GO:0006396: RNA processing | 2.87E-02 |
| 56 | GO:0007166: cell surface receptor signaling pathway | 4.56E-02 |
| 57 | GO:0008380: RNA splicing | 4.70E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0003963: RNA-3'-phosphate cyclase activity | 0.00E+00 |
| 2 | GO:0034062: 5'-3' RNA polymerase activity | 0.00E+00 |
| 3 | GO:0000166: nucleotide binding | 1.90E-13 |
| 4 | GO:0003723: RNA binding | 1.02E-11 |
| 5 | GO:0043021: ribonucleoprotein complex binding | 3.44E-07 |
| 6 | GO:0070181: small ribosomal subunit rRNA binding | 1.31E-06 |
| 7 | GO:0004004: ATP-dependent RNA helicase activity | 1.76E-06 |
| 8 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 1.21E-05 |
| 9 | GO:0008026: ATP-dependent helicase activity | 2.79E-05 |
| 10 | GO:0030515: snoRNA binding | 3.00E-05 |
| 11 | GO:0004519: endonuclease activity | 5.84E-05 |
| 12 | GO:0042134: rRNA primary transcript binding | 7.90E-05 |
| 13 | GO:0001054: RNA polymerase I activity | 1.08E-04 |
| 14 | GO:0004488: methylenetetrahydrofolate dehydrogenase (NADP+) activity | 1.89E-04 |
| 15 | GO:0004477: methenyltetrahydrofolate cyclohydrolase activity | 1.89E-04 |
| 16 | GO:0004816: asparagine-tRNA ligase activity | 3.17E-04 |
| 17 | GO:0048027: mRNA 5'-UTR binding | 4.58E-04 |
| 18 | GO:0003689: DNA clamp loader activity | 7.72E-04 |
| 19 | GO:0003735: structural constituent of ribosome | 2.03E-03 |
| 20 | GO:0004521: endoribonuclease activity | 2.92E-03 |
| 21 | GO:0001056: RNA polymerase III activity | 2.92E-03 |
| 22 | GO:0004407: histone deacetylase activity | 4.31E-03 |
| 23 | GO:0004527: exonuclease activity | 6.92E-03 |
| 24 | GO:0003713: transcription coactivator activity | 6.92E-03 |
| 25 | GO:0003676: nucleic acid binding | 7.24E-03 |
| 26 | GO:0008168: methyltransferase activity | 8.23E-03 |
| 27 | GO:0003746: translation elongation factor activity | 1.48E-02 |
| 28 | GO:0000987: core promoter proximal region sequence-specific DNA binding | 1.52E-02 |
| 29 | GO:0016887: ATPase activity | 2.44E-02 |
| 30 | GO:0051082: unfolded protein binding | 2.81E-02 |
| 31 | GO:0004386: helicase activity | 2.99E-02 |
| 32 | GO:0019843: rRNA binding | 3.30E-02 |
| 33 | GO:0016787: hydrolase activity | 3.44E-02 |
| 34 | GO:0005524: ATP binding | 3.79E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0034457: Mpp10 complex | 0.00E+00 |
| 2 | GO:0034455: t-UTP complex | 0.00E+00 |
| 3 | GO:0019034: viral replication complex | 0.00E+00 |
| 4 | GO:0070545: PeBoW complex | 0.00E+00 |
| 5 | GO:0005730: nucleolus | 7.45E-23 |
| 6 | GO:0080008: Cul4-RING E3 ubiquitin ligase complex | 9.12E-10 |
| 7 | GO:0032040: small-subunit processome | 1.51E-08 |
| 8 | GO:0005634: nucleus | 5.33E-08 |
| 9 | GO:0030687: preribosome, large subunit precursor | 1.91E-07 |
| 10 | GO:0005834: heterotrimeric G-protein complex | 1.95E-05 |
| 11 | GO:0005763: mitochondrial small ribosomal subunit | 6.25E-05 |
| 12 | GO:0005736: DNA-directed RNA polymerase I complex | 6.25E-05 |
| 13 | GO:0034388: Pwp2p-containing subcomplex of 90S preribosome | 7.90E-05 |
| 14 | GO:0030688: preribosome, small subunit precursor | 7.90E-05 |
| 15 | GO:0005663: DNA replication factor C complex | 6.09E-04 |
| 16 | GO:0022627: cytosolic small ribosomal subunit | 1.01E-03 |
| 17 | GO:0016363: nuclear matrix | 1.12E-03 |
| 18 | GO:0034399: nuclear periphery | 1.51E-03 |
| 19 | GO:0005666: DNA-directed RNA polymerase III complex | 2.18E-03 |
| 20 | GO:0015030: Cajal body | 2.18E-03 |
| 21 | GO:0019013: viral nucleocapsid | 3.18E-03 |
| 22 | GO:0005654: nucleoplasm | 3.91E-03 |
| 23 | GO:0043234: protein complex | 4.02E-03 |
| 24 | GO:0042651: thylakoid membrane | 4.61E-03 |
| 25 | GO:0015935: small ribosomal subunit | 4.92E-03 |
| 26 | GO:0005759: mitochondrial matrix | 5.03E-03 |
| 27 | GO:0015934: large ribosomal subunit | 1.38E-02 |
| 28 | GO:0005732: small nucleolar ribonucleoprotein complex | 2.99E-02 |
| 29 | GO:0005622: intracellular | 4.92E-02 |