co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT2G37640

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:1905177: tracheary element differentiation	0.00E+00
2	GO:0010412: mannan metabolic process	0.00E+00
3	GO:0035437: maintenance of protein localization in endoplasmic reticulum	0.00E+00
4	GO:0090627: plant epidermal cell differentiation	0.00E+00
5	GO:0010025: wax biosynthetic process	4.48E-07
6	GO:0042335: cuticle development	2.38E-06
7	GO:0000038: very long-chain fatty acid metabolic process	8.40E-06
8	GO:0071555: cell wall organization	3.81E-05
9	GO:0009913: epidermal cell differentiation	4.99E-05
10	GO:0042761: very long-chain fatty acid biosynthetic process	2.20E-04
11	GO:1901679: nucleotide transmembrane transport	3.69E-04
12	GO:0010623: programmed cell death involved in cell development	6.04E-04
13	GO:0080121: AMP transport	6.04E-04
14	GO:0044210: 'de novo' CTP biosynthetic process	6.04E-04
15	GO:0006624: vacuolar protein processing	8.63E-04
16	GO:0010021: amylopectin biosynthetic process	1.14E-03
17	GO:0046345: abscisic acid catabolic process	1.14E-03
18	GO:0015689: molybdate ion transport	1.14E-03
19	GO:0046355: mannan catabolic process	1.14E-03
20	GO:0022622: root system development	1.14E-03
21	GO:0010508: positive regulation of autophagy	1.14E-03
22	GO:0015867: ATP transport	1.14E-03
23	GO:0071585: detoxification of cadmium ion	1.14E-03
24	GO:0045489: pectin biosynthetic process	1.19E-03
25	GO:0080143: regulation of amino acid export	1.45E-03
26	GO:0009823: cytokinin catabolic process	1.45E-03
27	GO:0006656: phosphatidylcholine biosynthetic process	1.45E-03
28	GO:0000302: response to reactive oxygen species	1.47E-03
29	GO:0019760: glucosinolate metabolic process	1.77E-03
30	GO:0015866: ADP transport	1.78E-03
31	GO:0000470: maturation of LSU-rRNA	1.78E-03
32	GO:0035435: phosphate ion transmembrane transport	1.78E-03
33	GO:0047484: regulation of response to osmotic stress	1.78E-03
34	GO:0098655: cation transmembrane transport	2.14E-03
35	GO:0045926: negative regulation of growth	2.14E-03
36	GO:0006633: fatty acid biosynthetic process	2.15E-03
37	GO:0045490: pectin catabolic process	2.42E-03
38	GO:0010103: stomatal complex morphogenesis	2.52E-03
39	GO:0032880: regulation of protein localization	2.52E-03
40	GO:0050829: defense response to Gram-negative bacterium	2.52E-03
41	GO:0009690: cytokinin metabolic process	2.91E-03
42	GO:0008610: lipid biosynthetic process	2.91E-03
43	GO:0035265: organ growth	2.91E-03
44	GO:0009819: drought recovery	2.91E-03
45	GO:0042255: ribosome assembly	2.91E-03
46	GO:0006353: DNA-templated transcription, termination	2.91E-03
47	GO:0009631: cold acclimation	3.16E-03
48	GO:0016051: carbohydrate biosynthetic process	3.46E-03
49	GO:0098656: anion transmembrane transport	3.77E-03
50	GO:0006631: fatty acid metabolic process	4.10E-03
51	GO:0009733: response to auxin	4.25E-03
52	GO:0009416: response to light stimulus	4.44E-03
53	GO:0042546: cell wall biogenesis	4.63E-03
54	GO:0016024: CDP-diacylglycerol biosynthetic process	5.69E-03
55	GO:0015706: nitrate transport	5.69E-03
56	GO:0009409: response to cold	5.89E-03
57	GO:2000012: regulation of auxin polar transport	6.22E-03
58	GO:0010102: lateral root morphogenesis	6.22E-03
59	GO:0010143: cutin biosynthetic process	6.76E-03
60	GO:0043086: negative regulation of catalytic activity	7.08E-03
61	GO:0009833: plant-type primary cell wall biogenesis	7.90E-03
62	GO:0042545: cell wall modification	8.27E-03
63	GO:0006289: nucleotide-excision repair	8.48E-03
64	GO:0030245: cellulose catabolic process	1.04E-02
65	GO:0001944: vasculature development	1.10E-02
66	GO:0009831: plant-type cell wall modification involved in multidimensional cell growth	1.10E-02
67	GO:0010089: xylem development	1.17E-02
68	GO:0006284: base-excision repair	1.17E-02
69	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	1.24E-02
70	GO:0070417: cellular response to cold	1.24E-02
71	GO:0008284: positive regulation of cell proliferation	1.24E-02
72	GO:0042631: cellular response to water deprivation	1.31E-02
73	GO:0006979: response to oxidative stress	1.31E-02
74	GO:0000226: microtubule cytoskeleton organization	1.31E-02
75	GO:0048868: pollen tube development	1.38E-02
76	GO:0010268: brassinosteroid homeostasis	1.38E-02
77	GO:0009958: positive gravitropism	1.38E-02
78	GO:0019252: starch biosynthetic process	1.52E-02
79	GO:0010183: pollen tube guidance	1.52E-02
80	GO:0048825: cotyledon development	1.52E-02
81	GO:0016132: brassinosteroid biosynthetic process	1.60E-02
82	GO:0009739: response to gibberellin	1.65E-02
83	GO:0032502: developmental process	1.67E-02
84	GO:0006470: protein dephosphorylation	1.69E-02
85	GO:0009828: plant-type cell wall loosening	1.83E-02
86	GO:0006310: DNA recombination	1.83E-02
87	GO:0016125: sterol metabolic process	1.83E-02
88	GO:0009639: response to red or far red light	1.83E-02
89	GO:0006904: vesicle docking involved in exocytosis	1.91E-02
90	GO:0009826: unidimensional cell growth	2.21E-02
91	GO:0042128: nitrate assimilation	2.24E-02
92	GO:0010411: xyloglucan metabolic process	2.33E-02
93	GO:0030244: cellulose biosynthetic process	2.51E-02
94	GO:0055085: transmembrane transport	2.54E-02
95	GO:0009832: plant-type cell wall biogenesis	2.60E-02
96	GO:0009407: toxin catabolic process	2.69E-02
97	GO:0007568: aging	2.78E-02
98	GO:0048527: lateral root development	2.78E-02
99	GO:0080167: response to karrikin	2.84E-02
100	GO:0006865: amino acid transport	2.87E-02
101	GO:0034599: cellular response to oxidative stress	3.06E-02
102	GO:0006839: mitochondrial transport	3.26E-02
103	GO:0009640: photomorphogenesis	3.55E-02
104	GO:0008283: cell proliferation	3.55E-02
105	GO:0009644: response to high light intensity	3.76E-02
106	GO:0009636: response to toxic substance	3.86E-02
107	GO:0006855: drug transmembrane transport	3.97E-02
108	GO:0009664: plant-type cell wall organization	4.18E-02
109	GO:0042538: hyperosmotic salinity response	4.18E-02
110	GO:0006281: DNA repair	4.18E-02
111	GO:0009809: lignin biosynthetic process	4.39E-02
112	GO:0051603: proteolysis involved in cellular protein catabolic process	4.50E-02
113	GO:0006857: oligopeptide transport	4.61E-02

Rank	GO Term	Adjusted P value
1	GO:0047513: 1,2-alpha-L-fucosidase activity	0.00E+00
2	GO:0003883: CTP synthase activity	1.11E-05
3	GO:0102337: 3-oxo-cerotoyl-CoA synthase activity	2.42E-05
4	GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity	2.42E-05
5	GO:0102336: 3-oxo-arachidoyl-CoA synthase activity	2.42E-05
6	GO:0008534: oxidized purine nucleobase lesion DNA N-glycosylase activity	1.62E-04
7	GO:0004105: choline-phosphate cytidylyltransferase activity	1.62E-04
8	GO:0047216: inositol 3-alpha-galactosyltransferase activity	3.69E-04
9	GO:0033201: alpha-1,4-glucan synthase activity	3.69E-04
10	GO:0048531: beta-1,3-galactosyltransferase activity	3.69E-04
11	GO:0042973: glucan endo-1,3-beta-D-glucosidase activity	4.47E-04
12	GO:0008083: growth factor activity	4.47E-04
13	GO:0017108: 5'-flap endonuclease activity	6.04E-04
14	GO:0070330: aromatase activity	6.04E-04
15	GO:0004373: glycogen (starch) synthase activity	6.04E-04
16	GO:0010295: (+)-abscisic acid 8'-hydroxylase activity	6.04E-04
17	GO:0016985: mannan endo-1,4-beta-mannosidase activity	1.14E-03
18	GO:0019104: DNA N-glycosylase activity	1.14E-03
19	GO:0015098: molybdate ion transmembrane transporter activity	1.14E-03
20	GO:0009011: starch synthase activity	1.14E-03
21	GO:0018685: alkane 1-monooxygenase activity	1.45E-03
22	GO:0009922: fatty acid elongase activity	1.45E-03
23	GO:0019139: cytokinin dehydrogenase activity	1.45E-03
24	GO:0080122: AMP transmembrane transporter activity	1.45E-03
25	GO:0019843: rRNA binding	1.61E-03
26	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	1.63E-03
27	GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity	1.78E-03
28	GO:0004130: cytochrome-c peroxidase activity	1.78E-03
29	GO:0004366: glycerol-3-phosphate O-acyltransferase activity	1.78E-03
30	GO:0005347: ATP transmembrane transporter activity	2.14E-03
31	GO:0015217: ADP transmembrane transporter activity	2.14E-03
32	GO:0046910: pectinesterase inhibitor activity	2.22E-03
33	GO:0016621: cinnamoyl-CoA reductase activity	2.52E-03
34	GO:0016209: antioxidant activity	2.91E-03
35	GO:0042626: ATPase activity, coupled to transmembrane movement of substances	3.28E-03
36	GO:0015112: nitrate transmembrane transporter activity	4.22E-03
37	GO:0004022: alcohol dehydrogenase (NAD) activity	6.22E-03
38	GO:0015114: phosphate ion transmembrane transporter activity	6.22E-03
39	GO:0045330: aspartyl esterase activity	6.63E-03
40	GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups	7.31E-03
41	GO:0008146: sulfotransferase activity	7.32E-03
42	GO:0043565: sequence-specific DNA binding	7.97E-03
43	GO:0030599: pectinesterase activity	8.03E-03
44	GO:0016746: transferase activity, transferring acyl groups	8.78E-03
45	GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity	1.04E-02
46	GO:0016758: transferase activity, transferring hexosyl groups	1.04E-02
47	GO:0016760: cellulose synthase (UDP-forming) activity	1.10E-02
48	GO:0030570: pectate lyase activity	1.10E-02
49	GO:0008810: cellulase activity	1.10E-02
50	GO:0003727: single-stranded RNA binding	1.17E-02
51	GO:0016762: xyloglucan:xyloglucosyl transferase activity	1.60E-02
52	GO:0004197: cysteine-type endopeptidase activity	1.67E-02
53	GO:0004518: nuclease activity	1.67E-02
54	GO:0016759: cellulose synthase activity	1.83E-02
55	GO:0003684: damaged DNA binding	1.83E-02
56	GO:0016791: phosphatase activity	1.83E-02
57	GO:0016798: hydrolase activity, acting on glycosyl bonds	2.33E-02
58	GO:0008757: S-adenosylmethionine-dependent methyltransferase activity	2.42E-02
59	GO:0004222: metalloendopeptidase activity	2.69E-02
60	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	2.78E-02
61	GO:0016757: transferase activity, transferring glycosyl groups	2.86E-02
62	GO:0003993: acid phosphatase activity	3.06E-02
63	GO:0004364: glutathione transferase activity	3.45E-02
64	GO:0004722: protein serine/threonine phosphatase activity	3.73E-02
65	GO:0003924: GTPase activity	4.18E-02
66	GO:0003690: double-stranded DNA binding	4.50E-02
67	GO:0003700: transcription factor activity, sequence-specific DNA binding	4.63E-02

Rank	GO Term	Adjusted P value
1	GO:0098572: stromal side of plastid thylakoid membrane	0.00E+00
2	GO:0033557: Slx1-Slx4 complex	0.00E+00
3	GO:0031357: integral component of chloroplast inner membrane	3.69E-04
4	GO:0009508: plastid chromosome	3.96E-04
5	GO:0009295: nucleoid	1.88E-03
6	GO:0009501: amyloplast	2.91E-03
7	GO:0046658: anchored component of plasma membrane	3.46E-03
8	GO:0042644: chloroplast nucleoid	3.77E-03
9	GO:0005618: cell wall	4.60E-03
10	GO:0009505: plant-type cell wall	5.15E-03
11	GO:0031012: extracellular matrix	6.22E-03
12	GO:0031225: anchored component of membrane	8.71E-03
13	GO:0005886: plasma membrane	8.92E-03
14	GO:0005615: extracellular space	1.65E-02
15	GO:0000145: exocyst	1.67E-02
16	GO:0071944: cell periphery	1.75E-02
17	GO:0005576: extracellular region	1.76E-02
18	GO:0009941: chloroplast envelope	1.85E-02
19	GO:0005788: endoplasmic reticulum lumen	2.16E-02
20	GO:0031977: thylakoid lumen	3.35E-02
21	GO:0005622: intracellular	3.85E-02
22	GO:0005783: endoplasmic reticulum	3.86E-02
23	GO:0016021: integral component of membrane	4.03E-02
24	GO:0009535: chloroplast thylakoid membrane	4.25E-02
25	GO:0005840: ribosome	4.78E-02