GO Enrichment Analysis of Co-expressed Genes with
AT2G36990
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0018316: peptide cross-linking via L-cystine | 0.00E+00 |
| 2 | GO:0006907: pinocytosis | 0.00E+00 |
| 3 | GO:0010323: negative regulation of isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway | 0.00E+00 |
| 4 | GO:0016123: xanthophyll biosynthetic process | 2.73E-06 |
| 5 | GO:0042371: vitamin K biosynthetic process | 3.64E-05 |
| 6 | GO:0071454: cellular response to anoxia | 3.64E-05 |
| 7 | GO:0080153: negative regulation of reductive pentose-phosphate cycle | 9.09E-05 |
| 8 | GO:0010024: phytochromobilin biosynthetic process | 9.09E-05 |
| 9 | GO:0010275: NAD(P)H dehydrogenase complex assembly | 9.09E-05 |
| 10 | GO:0048255: mRNA stabilization | 9.09E-05 |
| 11 | GO:0008033: tRNA processing | 1.55E-04 |
| 12 | GO:0009451: RNA modification | 1.97E-04 |
| 13 | GO:0033014: tetrapyrrole biosynthetic process | 2.33E-04 |
| 14 | GO:0090307: mitotic spindle assembly | 2.33E-04 |
| 15 | GO:0051415: interphase microtubule nucleation by interphase microtubule organizing center | 2.33E-04 |
| 16 | GO:0031122: cytoplasmic microtubule organization | 3.14E-04 |
| 17 | GO:0016120: carotene biosynthetic process | 4.01E-04 |
| 18 | GO:0032973: amino acid export | 4.92E-04 |
| 19 | GO:0010019: chloroplast-nucleus signaling pathway | 5.88E-04 |
| 20 | GO:0006401: RNA catabolic process | 6.87E-04 |
| 21 | GO:0043090: amino acid import | 6.87E-04 |
| 22 | GO:0006402: mRNA catabolic process | 7.90E-04 |
| 23 | GO:0042255: ribosome assembly | 7.90E-04 |
| 24 | GO:0006353: DNA-templated transcription, termination | 7.90E-04 |
| 25 | GO:0080144: amino acid homeostasis | 1.01E-03 |
| 26 | GO:0006783: heme biosynthetic process | 1.01E-03 |
| 27 | GO:0009051: pentose-phosphate shunt, oxidative branch | 1.01E-03 |
| 28 | GO:0006779: porphyrin-containing compound biosynthetic process | 1.12E-03 |
| 29 | GO:0009098: leucine biosynthetic process | 1.12E-03 |
| 30 | GO:0031425: chloroplast RNA processing | 1.12E-03 |
| 31 | GO:0045037: protein import into chloroplast stroma | 1.49E-03 |
| 32 | GO:0006006: glucose metabolic process | 1.62E-03 |
| 33 | GO:0009767: photosynthetic electron transport chain | 1.62E-03 |
| 34 | GO:0034605: cellular response to heat | 1.76E-03 |
| 35 | GO:0019253: reductive pentose-phosphate cycle | 1.76E-03 |
| 36 | GO:0006289: nucleotide-excision repair | 2.18E-03 |
| 37 | GO:0009793: embryo development ending in seed dormancy | 2.18E-03 |
| 38 | GO:0007017: microtubule-based process | 2.33E-03 |
| 39 | GO:0080092: regulation of pollen tube growth | 2.64E-03 |
| 40 | GO:0070417: cellular response to cold | 3.13E-03 |
| 41 | GO:0009658: chloroplast organization | 3.13E-03 |
| 42 | GO:0009958: positive gravitropism | 3.47E-03 |
| 43 | GO:0007018: microtubule-based movement | 3.64E-03 |
| 44 | GO:0016032: viral process | 4.19E-03 |
| 45 | GO:0032502: developmental process | 4.19E-03 |
| 46 | GO:0000910: cytokinesis | 4.95E-03 |
| 47 | GO:0016126: sterol biosynthetic process | 5.15E-03 |
| 48 | GO:0015995: chlorophyll biosynthetic process | 5.76E-03 |
| 49 | GO:0009744: response to sucrose | 8.68E-03 |
| 50 | GO:0009846: pollen germination | 1.02E-02 |
| 51 | GO:0006364: rRNA processing | 1.07E-02 |
| 52 | GO:0009790: embryo development | 1.80E-02 |
| 53 | GO:0016036: cellular response to phosphate starvation | 1.92E-02 |
| 54 | GO:0007166: cell surface receptor signaling pathway | 2.23E-02 |
| 55 | GO:0008380: RNA splicing | 2.29E-02 |
| 56 | GO:0042254: ribosome biogenesis | 2.80E-02 |
| 57 | GO:0009860: pollen tube growth | 2.91E-02 |
| 58 | GO:0015979: photosynthesis | 3.54E-02 |
| 59 | GO:0006629: lipid metabolic process | 4.25E-02 |
| 60 | GO:0006397: mRNA processing | 4.38E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0016636: oxidoreductase activity, acting on the CH-CH group of donors, iron-sulfur protein as acceptor | 0.00E+00 |
| 2 | GO:0047793: cycloeucalenol cycloisomerase activity | 0.00E+00 |
| 3 | GO:0008935: 1,4-dihydroxy-2-naphthoyl-CoA synthase activity | 0.00E+00 |
| 4 | GO:0050619: phytochromobilin:ferredoxin oxidoreductase activity | 0.00E+00 |
| 5 | GO:0004654: polyribonucleotide nucleotidyltransferase activity | 3.64E-05 |
| 6 | GO:0004325: ferrochelatase activity | 3.64E-05 |
| 7 | GO:0003862: 3-isopropylmalate dehydrogenase activity | 9.09E-05 |
| 8 | GO:0003723: RNA binding | 2.14E-04 |
| 9 | GO:0016851: magnesium chelatase activity | 2.33E-04 |
| 10 | GO:0004607: phosphatidylcholine-sterol O-acyltransferase activity | 3.14E-04 |
| 11 | GO:0004345: glucose-6-phosphate dehydrogenase activity | 3.14E-04 |
| 12 | GO:0043015: gamma-tubulin binding | 3.14E-04 |
| 13 | GO:0008374: O-acyltransferase activity | 4.01E-04 |
| 14 | GO:0051011: microtubule minus-end binding | 4.01E-04 |
| 15 | GO:0015631: tubulin binding | 5.88E-04 |
| 16 | GO:0004519: endonuclease activity | 8.16E-04 |
| 17 | GO:0003690: double-stranded DNA binding | 8.89E-04 |
| 18 | GO:0003777: microtubule motor activity | 9.47E-04 |
| 19 | GO:0005089: Rho guanyl-nucleotide exchange factor activity | 1.36E-03 |
| 20 | GO:0000175: 3'-5'-exoribonuclease activity | 1.62E-03 |
| 21 | GO:0042973: glucan endo-1,3-beta-D-glucosidase activity | 1.76E-03 |
| 22 | GO:0004190: aspartic-type endopeptidase activity | 1.89E-03 |
| 23 | GO:0003727: single-stranded RNA binding | 2.96E-03 |
| 24 | GO:0048038: quinone binding | 4.00E-03 |
| 25 | GO:0004518: nuclease activity | 4.19E-03 |
| 26 | GO:0005200: structural constituent of cytoskeleton | 4.75E-03 |
| 27 | GO:0050897: cobalt ion binding | 6.83E-03 |
| 28 | GO:0050661: NADP binding | 7.97E-03 |
| 29 | GO:0051287: NAD binding | 9.93E-03 |
| 30 | GO:0015171: amino acid transmembrane transporter activity | 1.15E-02 |
| 31 | GO:0016740: transferase activity | 1.23E-02 |
| 32 | GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups | 1.23E-02 |
| 33 | GO:0019843: rRNA binding | 1.61E-02 |
| 34 | GO:0008565: protein transporter activity | 1.83E-02 |
| 35 | GO:0004675: transmembrane receptor protein serine/threonine kinase activity | 1.92E-02 |
| 36 | GO:0008017: microtubule binding | 2.09E-02 |
| 37 | GO:0003676: nucleic acid binding | 2.18E-02 |
| 38 | GO:0000287: magnesium ion binding | 2.72E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009507: chloroplast | 1.77E-10 |
| 2 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 1.88E-05 |
| 3 | GO:0008274: gamma-tubulin ring complex | 9.09E-05 |
| 4 | GO:0000923: equatorial microtubule organizing center | 2.33E-04 |
| 5 | GO:0030286: dynein complex | 3.14E-04 |
| 6 | GO:0030660: Golgi-associated vesicle membrane | 3.14E-04 |
| 7 | GO:0071556: integral component of lumenal side of endoplasmic reticulum membrane | 3.14E-04 |
| 8 | GO:0055035: plastid thylakoid membrane | 4.01E-04 |
| 9 | GO:0009535: chloroplast thylakoid membrane | 4.07E-04 |
| 10 | GO:0009840: chloroplastic endopeptidase Clp complex | 5.88E-04 |
| 11 | GO:0009570: chloroplast stroma | 6.57E-04 |
| 12 | GO:0071458: integral component of cytoplasmic side of endoplasmic reticulum membrane | 7.90E-04 |
| 13 | GO:0000922: spindle pole | 1.01E-03 |
| 14 | GO:0016324: apical plasma membrane | 1.24E-03 |
| 15 | GO:0005765: lysosomal membrane | 1.36E-03 |
| 16 | GO:0005875: microtubule associated complex | 2.04E-03 |
| 17 | GO:0043234: protein complex | 2.04E-03 |
| 18 | GO:0042651: thylakoid membrane | 2.33E-03 |
| 19 | GO:0009654: photosystem II oxygen evolving complex | 2.33E-03 |
| 20 | GO:0005871: kinesin complex | 3.13E-03 |
| 21 | GO:0005874: microtubule | 3.74E-03 |
| 22 | GO:0019898: extrinsic component of membrane | 3.82E-03 |
| 23 | GO:0043231: intracellular membrane-bounded organelle | 6.27E-03 |
| 24 | GO:0009579: thylakoid | 1.21E-02 |
| 25 | GO:0009706: chloroplast inner membrane | 1.37E-02 |
| 26 | GO:0009543: chloroplast thylakoid lumen | 1.61E-02 |
| 27 | GO:0005623: cell | 1.64E-02 |
| 28 | GO:0046658: anchored component of plasma membrane | 2.47E-02 |
| 29 | GO:0009536: plastid | 2.52E-02 |
| 30 | GO:0031969: chloroplast membrane | 3.22E-02 |