GO Enrichment Analysis of Co-expressed Genes with
AT2G35940
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0035725: sodium ion transmembrane transport | 0.00E+00 |
| 2 | GO:1903070: negative regulation of ER-associated ubiquitin-dependent protein catabolic process | 0.00E+00 |
| 3 | GO:1903857: negative regulation of cytokinin dehydrogenase activity | 0.00E+00 |
| 4 | GO:0015833: peptide transport | 0.00E+00 |
| 5 | GO:2000117: negative regulation of cysteine-type endopeptidase activity | 0.00E+00 |
| 6 | GO:0042430: indole-containing compound metabolic process | 0.00E+00 |
| 7 | GO:0030149: sphingolipid catabolic process | 0.00E+00 |
| 8 | GO:1990569: UDP-N-acetylglucosamine transmembrane transport | 0.00E+00 |
| 9 | GO:0015789: UDP-N-acetylgalactosamine transport | 0.00E+00 |
| 10 | GO:0006099: tricarboxylic acid cycle | 4.37E-06 |
| 11 | GO:0055114: oxidation-reduction process | 8.06E-06 |
| 12 | GO:0006097: glyoxylate cycle | 1.04E-05 |
| 13 | GO:0098719: sodium ion import across plasma membrane | 1.04E-05 |
| 14 | GO:0006564: L-serine biosynthetic process | 1.04E-05 |
| 15 | GO:0006122: mitochondrial electron transport, ubiquinol to cytochrome c | 3.11E-05 |
| 16 | GO:0006102: isocitrate metabolic process | 4.08E-05 |
| 17 | GO:0051453: regulation of intracellular pH | 7.87E-05 |
| 18 | GO:0006083: acetate metabolic process | 8.09E-05 |
| 19 | GO:0010365: positive regulation of ethylene biosynthetic process | 8.09E-05 |
| 20 | GO:1901349: glucosinolate transport | 8.09E-05 |
| 21 | GO:0090449: phloem glucosinolate loading | 8.09E-05 |
| 22 | GO:0019605: butyrate metabolic process | 8.09E-05 |
| 23 | GO:0006807: nitrogen compound metabolic process | 1.49E-04 |
| 24 | GO:0006123: mitochondrial electron transport, cytochrome c to oxygen | 1.93E-04 |
| 25 | GO:0006212: uracil catabolic process | 1.93E-04 |
| 26 | GO:1905011: transmembrane phosphate ion transport from cytosol to vacuole | 1.93E-04 |
| 27 | GO:0006101: citrate metabolic process | 1.93E-04 |
| 28 | GO:0019483: beta-alanine biosynthetic process | 1.93E-04 |
| 29 | GO:0015786: UDP-glucose transport | 1.93E-04 |
| 30 | GO:0019752: carboxylic acid metabolic process | 1.93E-04 |
| 31 | GO:0042939: tripeptide transport | 1.93E-04 |
| 32 | GO:0033512: L-lysine catabolic process to acetyl-CoA via saccharopine | 1.93E-04 |
| 33 | GO:1990069: stomatal opening | 1.93E-04 |
| 34 | GO:0010351: lithium ion transport | 3.24E-04 |
| 35 | GO:0015783: GDP-fucose transport | 3.24E-04 |
| 36 | GO:0009413: response to flooding | 4.66E-04 |
| 37 | GO:0072334: UDP-galactose transmembrane transport | 4.66E-04 |
| 38 | GO:0001676: long-chain fatty acid metabolic process | 4.66E-04 |
| 39 | GO:0006814: sodium ion transport | 5.19E-04 |
| 40 | GO:0042744: hydrogen peroxide catabolic process | 5.81E-04 |
| 41 | GO:0042938: dipeptide transport | 6.21E-04 |
| 42 | GO:0006979: response to oxidative stress | 6.54E-04 |
| 43 | GO:0071805: potassium ion transmembrane transport | 7.56E-04 |
| 44 | GO:1902183: regulation of shoot apical meristem development | 7.86E-04 |
| 45 | GO:0006121: mitochondrial electron transport, succinate to ubiquinone | 9.59E-04 |
| 46 | GO:0048831: regulation of shoot system development | 9.59E-04 |
| 47 | GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly | 9.59E-04 |
| 48 | GO:0030643: cellular phosphate ion homeostasis | 1.14E-03 |
| 49 | GO:0009651: response to salt stress | 1.45E-03 |
| 50 | GO:0055075: potassium ion homeostasis | 1.54E-03 |
| 51 | GO:0009061: anaerobic respiration | 1.54E-03 |
| 52 | GO:0006631: fatty acid metabolic process | 1.61E-03 |
| 53 | GO:0043562: cellular response to nitrogen levels | 1.76E-03 |
| 54 | GO:0009060: aerobic respiration | 1.98E-03 |
| 55 | GO:0015780: nucleotide-sugar transport | 1.98E-03 |
| 56 | GO:0098656: anion transmembrane transport | 1.98E-03 |
| 57 | GO:0009051: pentose-phosphate shunt, oxidative branch | 1.98E-03 |
| 58 | GO:0080144: amino acid homeostasis | 1.98E-03 |
| 59 | GO:0090333: regulation of stomatal closure | 1.98E-03 |
| 60 | GO:0006754: ATP biosynthetic process | 1.98E-03 |
| 61 | GO:0043069: negative regulation of programmed cell death | 2.46E-03 |
| 62 | GO:0055062: phosphate ion homeostasis | 2.46E-03 |
| 63 | GO:0016485: protein processing | 2.71E-03 |
| 64 | GO:0072593: reactive oxygen species metabolic process | 2.71E-03 |
| 65 | GO:0006096: glycolytic process | 2.75E-03 |
| 66 | GO:0006820: anion transport | 2.97E-03 |
| 67 | GO:0006006: glucose metabolic process | 3.24E-03 |
| 68 | GO:0002237: response to molecule of bacterial origin | 3.52E-03 |
| 69 | GO:0090351: seedling development | 3.81E-03 |
| 70 | GO:0015992: proton transport | 5.02E-03 |
| 71 | GO:0048511: rhythmic process | 5.02E-03 |
| 72 | GO:0003333: amino acid transmembrane transport | 5.02E-03 |
| 73 | GO:0030245: cellulose catabolic process | 5.34E-03 |
| 74 | GO:0016226: iron-sulfur cluster assembly | 5.34E-03 |
| 75 | GO:0030433: ubiquitin-dependent ERAD pathway | 5.34E-03 |
| 76 | GO:0010150: leaf senescence | 5.69E-03 |
| 77 | GO:0046686: response to cadmium ion | 5.92E-03 |
| 78 | GO:0010584: pollen exine formation | 6.01E-03 |
| 79 | GO:0009561: megagametogenesis | 6.01E-03 |
| 80 | GO:0006817: phosphate ion transport | 6.01E-03 |
| 81 | GO:0009739: response to gibberellin | 6.36E-03 |
| 82 | GO:0010118: stomatal movement | 6.70E-03 |
| 83 | GO:0015991: ATP hydrolysis coupled proton transport | 6.70E-03 |
| 84 | GO:0006520: cellular amino acid metabolic process | 7.06E-03 |
| 85 | GO:0006623: protein targeting to vacuole | 7.79E-03 |
| 86 | GO:0010183: pollen tube guidance | 7.79E-03 |
| 87 | GO:0009749: response to glucose | 7.79E-03 |
| 88 | GO:0010193: response to ozone | 8.17E-03 |
| 89 | GO:0006914: autophagy | 9.34E-03 |
| 90 | GO:0009737: response to abscisic acid | 9.50E-03 |
| 91 | GO:0016311: dephosphorylation | 1.23E-02 |
| 92 | GO:0009414: response to water deprivation | 1.33E-02 |
| 93 | GO:0010119: regulation of stomatal movement | 1.41E-02 |
| 94 | GO:0050832: defense response to fungus | 1.57E-02 |
| 95 | GO:0042542: response to hydrogen peroxide | 1.75E-02 |
| 96 | GO:0009926: auxin polar transport | 1.80E-02 |
| 97 | GO:0008283: cell proliferation | 1.80E-02 |
| 98 | GO:0015031: protein transport | 1.86E-02 |
| 99 | GO:0008643: carbohydrate transport | 1.91E-02 |
| 100 | GO:0009636: response to toxic substance | 1.96E-02 |
| 101 | GO:0006855: drug transmembrane transport | 2.01E-02 |
| 102 | GO:0031347: regulation of defense response | 2.07E-02 |
| 103 | GO:0009846: pollen germination | 2.12E-02 |
| 104 | GO:0006812: cation transport | 2.12E-02 |
| 105 | GO:0009809: lignin biosynthetic process | 2.23E-02 |
| 106 | GO:0051603: proteolysis involved in cellular protein catabolic process | 2.29E-02 |
| 107 | GO:0006857: oligopeptide transport | 2.34E-02 |
| 108 | GO:0009735: response to cytokinin | 2.63E-02 |
| 109 | GO:0009416: response to light stimulus | 2.87E-02 |
| 110 | GO:0009624: response to nematode | 2.87E-02 |
| 111 | GO:0009555: pollen development | 2.87E-02 |
| 112 | GO:0009058: biosynthetic process | 3.49E-02 |
| 113 | GO:0055085: transmembrane transport | 3.64E-02 |
| 114 | GO:0009793: embryo development ending in seed dormancy | 3.91E-02 |
| 115 | GO:0006413: translational initiation | 4.02E-02 |
| 116 | GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process | 4.58E-02 |
| 117 | GO:0009617: response to bacterium | 4.80E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0008670: 2,4-dienoyl-CoA reductase (NADPH) activity | 0.00E+00 |
| 2 | GO:0005463: UDP-N-acetylgalactosamine transmembrane transporter activity | 0.00E+00 |
| 3 | GO:0008117: sphinganine-1-phosphate aldolase activity | 0.00E+00 |
| 4 | GO:0003837: beta-ureidopropionase activity | 0.00E+00 |
| 5 | GO:0015197: peptide transporter activity | 0.00E+00 |
| 6 | GO:0015334: high-affinity oligopeptide transporter activity | 0.00E+00 |
| 7 | GO:0004617: phosphoglycerate dehydrogenase activity | 3.58E-07 |
| 8 | GO:0004149: dihydrolipoyllysine-residue succinyltransferase activity | 8.09E-05 |
| 9 | GO:0008440: inositol-1,4,5-trisphosphate 3-kinase activity | 8.09E-05 |
| 10 | GO:0016229: steroid dehydrogenase activity | 8.09E-05 |
| 11 | GO:0003987: acetate-CoA ligase activity | 8.09E-05 |
| 12 | GO:0010013: N-1-naphthylphthalamic acid binding | 8.09E-05 |
| 13 | GO:0000824: inositol tetrakisphosphate 3-kinase activity | 8.09E-05 |
| 14 | GO:0070401: NADP+ binding | 8.09E-05 |
| 15 | GO:0019786: Atg8-specific protease activity | 8.09E-05 |
| 16 | GO:0047326: inositol tetrakisphosphate 5-kinase activity | 8.09E-05 |
| 17 | GO:0047760: butyrate-CoA ligase activity | 8.09E-05 |
| 18 | GO:0000823: inositol-1,4,5-trisphosphate 6-kinase activity | 8.09E-05 |
| 19 | GO:0090448: glucosinolate:proton symporter activity | 8.09E-05 |
| 20 | GO:0015386: potassium:proton antiporter activity | 1.11E-04 |
| 21 | GO:0004601: peroxidase activity | 1.63E-04 |
| 22 | GO:0004634: phosphopyruvate hydratase activity | 1.93E-04 |
| 23 | GO:0004618: phosphoglycerate kinase activity | 1.93E-04 |
| 24 | GO:0004047: aminomethyltransferase activity | 1.93E-04 |
| 25 | GO:0003994: aconitate hydratase activity | 1.93E-04 |
| 26 | GO:0019779: Atg8 activating enzyme activity | 1.93E-04 |
| 27 | GO:0042937: tripeptide transporter activity | 1.93E-04 |
| 28 | GO:0008517: folic acid transporter activity | 1.93E-04 |
| 29 | GO:0051287: NAD binding | 2.00E-04 |
| 30 | GO:0005457: GDP-fucose transmembrane transporter activity | 3.24E-04 |
| 31 | GO:0004148: dihydrolipoyl dehydrogenase activity | 3.24E-04 |
| 32 | GO:0005507: copper ion binding | 3.42E-04 |
| 33 | GO:0004449: isocitrate dehydrogenase (NAD+) activity | 4.66E-04 |
| 34 | GO:0005460: UDP-glucose transmembrane transporter activity | 4.66E-04 |
| 35 | GO:0015368: calcium:cation antiporter activity | 6.21E-04 |
| 36 | GO:0004345: glucose-6-phosphate dehydrogenase activity | 6.21E-04 |
| 37 | GO:0042936: dipeptide transporter activity | 6.21E-04 |
| 38 | GO:0015369: calcium:proton antiporter activity | 6.21E-04 |
| 39 | GO:0019776: Atg8 ligase activity | 6.21E-04 |
| 40 | GO:0015385: sodium:proton antiporter activity | 6.71E-04 |
| 41 | GO:0005459: UDP-galactose transmembrane transporter activity | 7.86E-04 |
| 42 | GO:0000104: succinate dehydrogenase activity | 7.86E-04 |
| 43 | GO:0008177: succinate dehydrogenase (ubiquinone) activity | 7.86E-04 |
| 44 | GO:0016597: amino acid binding | 8.00E-04 |
| 45 | GO:0004069: L-aspartate:2-oxoglutarate aminotransferase activity | 9.59E-04 |
| 46 | GO:0016208: AMP binding | 9.59E-04 |
| 47 | GO:0080130: L-phenylalanine:2-oxoglutarate aminotransferase activity | 9.59E-04 |
| 48 | GO:0036402: proteasome-activating ATPase activity | 9.59E-04 |
| 49 | GO:0015081: sodium ion transmembrane transporter activity | 9.59E-04 |
| 50 | GO:0102391: decanoate--CoA ligase activity | 1.14E-03 |
| 51 | GO:0004222: metalloendopeptidase activity | 1.19E-03 |
| 52 | GO:0000287: magnesium ion binding | 1.24E-03 |
| 53 | GO:0050897: cobalt ion binding | 1.25E-03 |
| 54 | GO:0004467: long-chain fatty acid-CoA ligase activity | 1.34E-03 |
| 55 | GO:0016831: carboxy-lyase activity | 1.34E-03 |
| 56 | GO:0005338: nucleotide-sugar transmembrane transporter activity | 1.34E-03 |
| 57 | GO:0020037: heme binding | 1.42E-03 |
| 58 | GO:0015288: porin activity | 1.54E-03 |
| 59 | GO:0004033: aldo-keto reductase (NADP) activity | 1.54E-03 |
| 60 | GO:0052747: sinapyl alcohol dehydrogenase activity | 1.54E-03 |
| 61 | GO:0015491: cation:cation antiporter activity | 1.54E-03 |
| 62 | GO:0008270: zinc ion binding | 1.74E-03 |
| 63 | GO:0008308: voltage-gated anion channel activity | 1.76E-03 |
| 64 | GO:0008553: hydrogen-exporting ATPase activity, phosphorylative mechanism | 1.98E-03 |
| 65 | GO:0000989: transcription factor activity, transcription factor binding | 1.98E-03 |
| 66 | GO:0004177: aminopeptidase activity | 2.71E-03 |
| 67 | GO:0008559: xenobiotic-transporting ATPase activity | 2.71E-03 |
| 68 | GO:0045551: cinnamyl-alcohol dehydrogenase activity | 2.97E-03 |
| 69 | GO:0015114: phosphate ion transmembrane transporter activity | 3.24E-03 |
| 70 | GO:0008131: primary amine oxidase activity | 3.52E-03 |
| 71 | GO:0017025: TBP-class protein binding | 3.81E-03 |
| 72 | GO:0005524: ATP binding | 4.13E-03 |
| 73 | GO:0030170: pyridoxal phosphate binding | 4.58E-03 |
| 74 | GO:0016887: ATPase activity | 4.71E-03 |
| 75 | GO:0008810: cellulase activity | 5.67E-03 |
| 76 | GO:0008514: organic anion transmembrane transporter activity | 6.01E-03 |
| 77 | GO:0001085: RNA polymerase II transcription factor binding | 7.06E-03 |
| 78 | GO:0048038: quinone binding | 8.17E-03 |
| 79 | GO:0016791: phosphatase activity | 9.34E-03 |
| 80 | GO:0050660: flavin adenine dinucleotide binding | 1.02E-02 |
| 81 | GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding | 1.41E-02 |
| 82 | GO:0003993: acid phosphatase activity | 1.56E-02 |
| 83 | GO:0005215: transporter activity | 1.56E-02 |
| 84 | GO:0050661: NADP binding | 1.65E-02 |
| 85 | GO:0051539: 4 iron, 4 sulfur cluster binding | 1.65E-02 |
| 86 | GO:0009055: electron carrier activity | 1.73E-02 |
| 87 | GO:0004185: serine-type carboxypeptidase activity | 1.80E-02 |
| 88 | GO:0015171: amino acid transmembrane transporter activity | 2.40E-02 |
| 89 | GO:0046872: metal ion binding | 2.75E-02 |
| 90 | GO:0016746: transferase activity, transferring acyl groups | 2.93E-02 |
| 91 | GO:0043565: sequence-specific DNA binding | 3.50E-02 |
| 92 | GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding | 3.69E-02 |
| 93 | GO:0005351: sugar:proton symporter activity | 4.16E-02 |
| 94 | GO:0003743: translation initiation factor activity | 4.72E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0005774: vacuolar membrane | 1.28E-09 |
| 2 | GO:0005773: vacuole | 1.39E-06 |
| 3 | GO:0000325: plant-type vacuole | 3.25E-06 |
| 4 | GO:0005741: mitochondrial outer membrane | 8.34E-06 |
| 5 | GO:0009705: plant-type vacuole membrane | 7.51E-05 |
| 6 | GO:0045252: oxoglutarate dehydrogenase complex | 8.09E-05 |
| 7 | GO:0005750: mitochondrial respiratory chain complex III | 1.70E-04 |
| 8 | GO:0000015: phosphopyruvate hydratase complex | 1.93E-04 |
| 9 | GO:0005829: cytosol | 1.98E-04 |
| 10 | GO:0005777: peroxisome | 2.27E-04 |
| 11 | GO:0005758: mitochondrial intermembrane space | 2.41E-04 |
| 12 | GO:0046861: glyoxysomal membrane | 3.24E-04 |
| 13 | GO:0016020: membrane | 3.74E-04 |
| 14 | GO:0005775: vacuolar lumen | 4.66E-04 |
| 15 | GO:0005776: autophagosome | 6.21E-04 |
| 16 | GO:0005759: mitochondrial matrix | 6.58E-04 |
| 17 | GO:0005794: Golgi apparatus | 6.73E-04 |
| 18 | GO:0031597: cytosolic proteasome complex | 1.14E-03 |
| 19 | GO:0009986: cell surface | 1.34E-03 |
| 20 | GO:0031595: nuclear proteasome complex | 1.34E-03 |
| 21 | GO:0045273: respiratory chain complex II | 1.54E-03 |
| 22 | GO:0005749: mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone) | 1.54E-03 |
| 23 | GO:0000421: autophagosome membrane | 1.54E-03 |
| 24 | GO:0046930: pore complex | 1.76E-03 |
| 25 | GO:0009514: glyoxysome | 1.76E-03 |
| 26 | GO:0005886: plasma membrane | 1.85E-03 |
| 27 | GO:0008540: proteasome regulatory particle, base subcomplex | 2.22E-03 |
| 28 | GO:0000502: proteasome complex | 2.34E-03 |
| 29 | GO:0005740: mitochondrial envelope | 2.46E-03 |
| 30 | GO:0017119: Golgi transport complex | 2.46E-03 |
| 31 | GO:0005768: endosome | 2.57E-03 |
| 32 | GO:0009506: plasmodesma | 2.63E-03 |
| 33 | GO:0009536: plastid | 4.12E-03 |
| 34 | GO:0070469: respiratory chain | 4.70E-03 |
| 35 | GO:0031410: cytoplasmic vesicle | 5.34E-03 |
| 36 | GO:0005618: cell wall | 7.13E-03 |
| 37 | GO:0032580: Golgi cisterna membrane | 9.34E-03 |
| 38 | GO:0016021: integral component of membrane | 1.01E-02 |
| 39 | GO:0005802: trans-Golgi network | 1.02E-02 |
| 40 | GO:0005667: transcription factor complex | 1.14E-02 |
| 41 | GO:0009707: chloroplast outer membrane | 1.27E-02 |
| 42 | GO:0005739: mitochondrion | 1.38E-02 |
| 43 | GO:0009570: chloroplast stroma | 1.70E-02 |
| 44 | GO:0090406: pollen tube | 1.80E-02 |
| 45 | GO:0000139: Golgi membrane | 2.01E-02 |
| 46 | GO:0010008: endosome membrane | 2.57E-02 |
| 47 | GO:0005747: mitochondrial respiratory chain complex I | 2.57E-02 |
| 48 | GO:0005834: heterotrimeric G-protein complex | 2.63E-02 |