co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT2G34660

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0017012: protein-phytochromobilin linkage	0.00E+00
2	GO:0042908: xenobiotic transport	0.00E+00
3	GO:0009856: pollination	0.00E+00
4	GO:0018293: protein-FAD linkage	0.00E+00
5	GO:0034553: mitochondrial respiratory chain complex II assembly	0.00E+00
6	GO:0006593: ornithine catabolic process	0.00E+00
7	GO:0010202: response to low fluence red light stimulus	0.00E+00
8	GO:0009684: indoleacetic acid biosynthetic process	3.56E-05
9	GO:1903409: reactive oxygen species biosynthetic process	3.77E-05
10	GO:0019544: arginine catabolic process to glutamate	3.77E-05
11	GO:0006148: inosine catabolic process	3.77E-05
12	GO:0000305: response to oxygen radical	3.77E-05
13	GO:0006560: proline metabolic process	3.77E-05
14	GO:1902418: (+)-abscisic acid D-glucopyranosyl ester transmembrane transport	3.77E-05
15	GO:0010617: circadian regulation of calcium ion oscillation	9.40E-05
16	GO:0043100: pyrimidine nucleobase salvage	9.40E-05
17	GO:0010133: proline catabolic process to glutamate	9.40E-05
18	GO:0080022: primary root development	1.63E-04
19	GO:0045493: xylan catabolic process	1.63E-04
20	GO:0051646: mitochondrion localization	1.63E-04
21	GO:1902476: chloride transmembrane transport	2.40E-04
22	GO:0009584: detection of visible light	2.40E-04
23	GO:0010148: transpiration	2.40E-04
24	GO:0015700: arsenite transport	2.40E-04
25	GO:0055085: transmembrane transport	3.23E-04
26	GO:0044205: 'de novo' UMP biosynthetic process	3.24E-04
27	GO:0006646: phosphatidylethanolamine biosynthetic process	3.24E-04
28	GO:0009687: abscisic acid metabolic process	3.24E-04
29	GO:0006221: pyrimidine nucleotide biosynthetic process	3.24E-04
30	GO:0010600: regulation of auxin biosynthetic process	3.24E-04
31	GO:0009649: entrainment of circadian clock	3.24E-04
32	GO:0006749: glutathione metabolic process	3.24E-04
33	GO:0032366: intracellular sterol transport	3.24E-04
34	GO:0009816: defense response to bacterium, incompatible interaction	3.42E-04
35	GO:0055114: oxidation-reduction process	5.07E-04
36	GO:0003006: developmental process involved in reproduction	5.07E-04
37	GO:0006561: proline biosynthetic process	5.07E-04
38	GO:0006121: mitochondrial electron transport, succinate to ubiquinone	5.07E-04
39	GO:0006099: tricarboxylic acid cycle	5.52E-04
40	GO:0010244: response to low fluence blue light stimulus by blue low-fluence system	6.05E-04
41	GO:0006821: chloride transport	7.07E-04
42	GO:0010374: stomatal complex development	7.07E-04
43	GO:0010161: red light signaling pathway	7.07E-04
44	GO:0006207: 'de novo' pyrimidine nucleobase biosynthetic process	7.07E-04
45	GO:0048658: anther wall tapetum development	8.13E-04
46	GO:0015996: chlorophyll catabolic process	9.23E-04
47	GO:0080144: amino acid homeostasis	1.04E-03
48	GO:0046685: response to arsenic-containing substance	1.04E-03
49	GO:0006096: glycolytic process	1.05E-03
50	GO:0009638: phototropism	1.15E-03
51	GO:0005975: carbohydrate metabolic process	1.23E-03
52	GO:0045036: protein targeting to chloroplast	1.28E-03
53	GO:0006325: chromatin organization	1.28E-03
54	GO:0072593: reactive oxygen species metabolic process	1.40E-03
55	GO:0002213: defense response to insect	1.53E-03
56	GO:0006108: malate metabolic process	1.67E-03
57	GO:0006006: glucose metabolic process	1.67E-03
58	GO:2000028: regulation of photoperiodism, flowering	1.67E-03
59	GO:0050826: response to freezing	1.67E-03
60	GO:0006094: gluconeogenesis	1.67E-03
61	GO:0010102: lateral root morphogenesis	1.67E-03
62	GO:0006807: nitrogen compound metabolic process	1.67E-03
63	GO:0009266: response to temperature stimulus	1.81E-03
64	GO:0010039: response to iron ion	1.95E-03
65	GO:0010150: leaf senescence	2.13E-03
66	GO:0009617: response to bacterium	2.54E-03
67	GO:0019748: secondary metabolic process	2.72E-03
68	GO:0048653: anther development	3.40E-03
69	GO:0042391: regulation of membrane potential	3.40E-03
70	GO:0010154: fruit development	3.58E-03
71	GO:0008654: phospholipid biosynthetic process	3.94E-03
72	GO:0055072: iron ion homeostasis	3.94E-03
73	GO:0009851: auxin biosynthetic process	3.94E-03
74	GO:0016132: brassinosteroid biosynthetic process	4.13E-03
75	GO:0009630: gravitropism	4.32E-03
76	GO:1901657: glycosyl compound metabolic process	4.51E-03
77	GO:0016126: sterol biosynthetic process	5.31E-03
78	GO:0010029: regulation of seed germination	5.52E-03
79	GO:0009627: systemic acquired resistance	5.73E-03
80	GO:0018298: protein-chromophore linkage	6.38E-03
81	GO:0008219: cell death	6.38E-03
82	GO:0009817: defense response to fungus, incompatible interaction	6.38E-03
83	GO:0009813: flavonoid biosynthetic process	6.60E-03
84	GO:0046686: response to cadmium ion	6.74E-03
85	GO:0009407: toxin catabolic process	6.82E-03
86	GO:0010218: response to far red light	6.82E-03
87	GO:0006811: ion transport	6.82E-03
88	GO:0009867: jasmonic acid mediated signaling pathway	7.51E-03
89	GO:0009734: auxin-activated signaling pathway	8.39E-03
90	GO:0006631: fatty acid metabolic process	8.47E-03
91	GO:0009926: auxin polar transport	8.96E-03
92	GO:0009640: photomorphogenesis	8.96E-03
93	GO:0009636: response to toxic substance	9.73E-03
94	GO:0006855: drug transmembrane transport	9.99E-03
95	GO:0031347: regulation of defense response	1.02E-02
96	GO:0042538: hyperosmotic salinity response	1.05E-02
97	GO:0009585: red, far-red light phototransduction	1.11E-02
98	GO:0006857: oligopeptide transport	1.16E-02
99	GO:0048316: seed development	1.27E-02
100	GO:0009626: plant-type hypersensitive response	1.30E-02
101	GO:0009620: response to fungus	1.33E-02
102	GO:0009058: biosynthetic process	1.73E-02
103	GO:0016036: cellular response to phosphate starvation	1.99E-02
104	GO:0007623: circadian rhythm	2.09E-02
105	GO:0010468: regulation of gene expression	2.37E-02
106	GO:0009733: response to auxin	2.41E-02
107	GO:0009826: unidimensional cell growth	2.78E-02
108	GO:0009409: response to cold	2.91E-02
109	GO:0015979: photosynthesis	3.65E-02
110	GO:0045454: cell redox homeostasis	3.78E-02
111	GO:0045892: negative regulation of transcription, DNA-templated	3.82E-02
112	GO:0016042: lipid catabolic process	4.30E-02
113	GO:0006629: lipid metabolic process	4.39E-02

Rank	GO Term	Adjusted P value
1	GO:0102996: beta,beta digalactosyldiacylglycerol galactosyltransferase activity	0.00E+00
2	GO:0032441: pheophorbide a oxygenase activity	0.00E+00
3	GO:0015391: nucleobase:cation symporter activity	0.00E+00
4	GO:0003842: 1-pyrroline-5-carboxylate dehydrogenase activity	0.00E+00
5	GO:0008670: 2,4-dienoyl-CoA reductase (NADPH) activity	0.00E+00
6	GO:0004587: ornithine-oxo-acid transaminase activity	0.00E+00
7	GO:0015205: nucleobase transmembrane transporter activity	0.00E+00
8	GO:0031517: red light photoreceptor activity	0.00E+00
9	GO:0004151: dihydroorotase activity	0.00E+00
10	GO:0080109: indole-3-acetonitrile nitrile hydratase activity	9.28E-08
11	GO:0080061: indole-3-acetonitrile nitrilase activity	3.60E-07
12	GO:0010277: chlorophyllide a oxygenase [overall] activity	3.60E-07
13	GO:0000257: nitrilase activity	8.75E-07
14	GO:0045437: uridine nucleosidase activity	3.77E-05
15	GO:1990841: promoter-specific chromatin binding	3.77E-05
16	GO:0071992: phytochelatin transmembrane transporter activity	3.77E-05
17	GO:0004307: ethanolaminephosphotransferase activity	3.77E-05
18	GO:0016682: oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor	3.77E-05
19	GO:0031516: far-red light photoreceptor activity	3.77E-05
20	GO:1902417: (+)-abscisic acid D-glucopyranosyl ester transmembrane transporter activity	3.77E-05
21	GO:0000248: C-5 sterol desaturase activity	3.77E-05
22	GO:0046480: galactolipid galactosyltransferase activity	3.77E-05
23	GO:0004347: glucose-6-phosphate isomerase activity	3.77E-05
24	GO:0080079: cellobiose glucosidase activity	3.77E-05
25	GO:0001530: lipopolysaccharide binding	3.77E-05
26	GO:0016780: phosphotransferase activity, for other substituted phosphate groups	3.77E-05
27	GO:0015446: ATPase-coupled arsenite transmembrane transporter activity	3.77E-05
28	GO:0009671: nitrate:proton symporter activity	3.77E-05
29	GO:0051980: iron-nicotianamine transmembrane transporter activity	9.40E-05
30	GO:0004362: glutathione-disulfide reductase activity	9.40E-05
31	GO:0004566: beta-glucuronidase activity	9.40E-05
32	GO:0009883: red or far-red light photoreceptor activity	9.40E-05
33	GO:0047724: inosine nucleosidase activity	9.40E-05
34	GO:0030572: phosphatidyltransferase activity	9.40E-05
35	GO:0004142: diacylglycerol cholinephosphotransferase activity	9.40E-05
36	GO:0008020: G-protein coupled photoreceptor activity	1.63E-04
37	GO:0052692: raffinose alpha-galactosidase activity	1.63E-04
38	GO:0004557: alpha-galactosidase activity	1.63E-04
39	GO:0004365: glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity	2.40E-04
40	GO:0016810: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds	3.24E-04
41	GO:0009044: xylan 1,4-beta-xylosidase activity	3.24E-04
42	GO:0005253: anion channel activity	3.24E-04
43	GO:0080032: methyl jasmonate esterase activity	3.24E-04
44	GO:0005507: copper ion binding	3.86E-04
45	GO:0008177: succinate dehydrogenase (ubiquinone) activity	4.13E-04
46	GO:0004069: L-aspartate:2-oxoglutarate aminotransferase activity	5.07E-04
47	GO:0080130: L-phenylalanine:2-oxoglutarate aminotransferase activity	5.07E-04
48	GO:0016615: malate dehydrogenase activity	5.07E-04
49	GO:0005247: voltage-gated chloride channel activity	5.07E-04
50	GO:0080030: methyl indole-3-acetate esterase activity	5.07E-04
51	GO:0050661: NADP binding	6.01E-04
52	GO:0004723: calcium-dependent protein serine/threonine phosphatase activity	6.05E-04
53	GO:0030060: L-malate dehydrogenase activity	6.05E-04
54	GO:0005261: cation channel activity	6.05E-04
55	GO:0051537: 2 iron, 2 sulfur cluster binding	7.29E-04
56	GO:0009672: auxin:proton symporter activity	1.15E-03
57	GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity	1.15E-03
58	GO:0004673: protein histidine kinase activity	1.28E-03
59	GO:0008559: xenobiotic-transporting ATPase activity	1.40E-03
60	GO:0015198: oligopeptide transporter activity	1.53E-03
61	GO:0008378: galactosyltransferase activity	1.53E-03
62	GO:0000155: phosphorelay sensor kinase activity	1.67E-03
63	GO:0030170: pyridoxal phosphate binding	1.72E-03
64	GO:0030552: cAMP binding	1.95E-03
65	GO:0004867: serine-type endopeptidase inhibitor activity	1.95E-03
66	GO:0030553: cGMP binding	1.95E-03
67	GO:0051536: iron-sulfur cluster binding	2.25E-03
68	GO:0005216: ion channel activity	2.40E-03
69	GO:0046872: metal ion binding	2.47E-03
70	GO:0035251: UDP-glucosyltransferase activity	2.56E-03
71	GO:0042802: identical protein binding	2.70E-03
72	GO:0016788: hydrolase activity, acting on ester bonds	3.33E-03
73	GO:0005249: voltage-gated potassium channel activity	3.40E-03
74	GO:0030551: cyclic nucleotide binding	3.40E-03
75	GO:0016798: hydrolase activity, acting on glycosyl bonds	5.94E-03
76	GO:0050897: cobalt ion binding	7.05E-03
77	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	7.51E-03
78	GO:0003993: acid phosphatase activity	7.75E-03
79	GO:0008422: beta-glucosidase activity	7.99E-03
80	GO:0004364: glutathione transferase activity	8.71E-03
81	GO:0004185: serine-type carboxypeptidase activity	8.96E-03
82	GO:0051287: NAD binding	1.02E-02
83	GO:0016298: lipase activity	1.13E-02
84	GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups	1.27E-02
85	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	1.40E-02
86	GO:0005516: calmodulin binding	1.59E-02
87	GO:0004252: serine-type endopeptidase activity	1.79E-02
88	GO:0042626: ATPase activity, coupled to transmembrane movement of substances	2.48E-02
89	GO:0050660: flavin adenine dinucleotide binding	3.16E-02
90	GO:0052689: carboxylic ester hydrolase activity	3.57E-02
91	GO:0042803: protein homodimerization activity	3.91E-02
92	GO:0004871: signal transducer activity	3.91E-02
93	GO:0004722: protein serine/threonine phosphatase activity	4.03E-02
94	GO:0009055: electron carrier activity	4.61E-02

Rank	GO Term	Adjusted P value
1	GO:0005759: mitochondrial matrix	8.64E-06
2	GO:0005578: proteinaceous extracellular matrix	4.90E-05
3	GO:0048046: apoplast	2.12E-04
4	GO:0009526: plastid envelope	3.24E-04
5	GO:0034707: chloride channel complex	5.07E-04
6	GO:0031359: integral component of chloroplast outer membrane	7.07E-04
7	GO:0009505: plant-type cell wall	9.29E-04
8	GO:0016604: nuclear body	1.15E-03
9	GO:0009706: chloroplast inner membrane	1.25E-03
10	GO:0005765: lysosomal membrane	1.40E-03
11	GO:0031012: extracellular matrix	1.67E-03
12	GO:0005829: cytosol	2.75E-03
13	GO:0005618: cell wall	5.28E-03
14	GO:0009707: chloroplast outer membrane	6.38E-03
15	GO:0000325: plant-type vacuole	7.05E-03
16	GO:0005576: extracellular region	1.19E-02
17	GO:0005777: peroxisome	1.21E-02
18	GO:0016607: nuclear speck	1.27E-02
19	GO:0005774: vacuolar membrane	1.86E-02
20	GO:0009705: plant-type vacuole membrane	2.09E-02
21	GO:0005615: extracellular space	2.26E-02
22	GO:0046658: anchored component of plasma membrane	2.55E-02
23	GO:0009536: plastid	2.64E-02
24	GO:0009941: chloroplast envelope	2.73E-02
25	GO:0005773: vacuole	3.17E-02
26	GO:0005789: endoplasmic reticulum membrane	3.28E-02
27	GO:0031969: chloroplast membrane	3.32E-02