co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT2G34630

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0030149: sphingolipid catabolic process	0.00E+00
2	GO:1990569: UDP-N-acetylglucosamine transmembrane transport	0.00E+00
3	GO:0015789: UDP-N-acetylgalactosamine transport	0.00E+00
4	GO:1901799: negative regulation of proteasomal protein catabolic process	0.00E+00
5	GO:1903070: negative regulation of ER-associated ubiquitin-dependent protein catabolic process	0.00E+00
6	GO:1903857: negative regulation of cytokinin dehydrogenase activity	0.00E+00
7	GO:0009264: deoxyribonucleotide catabolic process	0.00E+00
8	GO:0023052: signaling	0.00E+00
9	GO:0001789: G-protein coupled receptor signaling pathway, coupled to S1P second messenger	0.00E+00
10	GO:0006511: ubiquitin-dependent protein catabolic process	3.04E-25
11	GO:0051603: proteolysis involved in cellular protein catabolic process	8.99E-09
12	GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process	5.25E-06
13	GO:0046686: response to cadmium ion	5.64E-06
14	GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly	1.54E-05
15	GO:0030163: protein catabolic process	3.25E-05
16	GO:0006102: isocitrate metabolic process	3.94E-05
17	GO:0015798: myo-inositol transport	7.90E-05
18	GO:1990542: mitochondrial transmembrane transport	7.90E-05
19	GO:0000291: nuclear-transcribed mRNA catabolic process, exonucleolytic	7.90E-05
20	GO:0061014: positive regulation of mRNA catabolic process	7.90E-05
21	GO:0042964: thioredoxin reduction	7.90E-05
22	GO:0009853: photorespiration	1.02E-04
23	GO:0072593: reactive oxygen species metabolic process	1.08E-04
24	GO:0006101: citrate metabolic process	1.89E-04
25	GO:0019752: carboxylic acid metabolic process	1.89E-04
26	GO:0043132: NAD transport	1.89E-04
27	GO:0006123: mitochondrial electron transport, cytochrome c to oxygen	1.89E-04
28	GO:0051788: response to misfolded protein	1.89E-04
29	GO:0030433: ubiquitin-dependent ERAD pathway	3.14E-04
30	GO:0044375: regulation of peroxisome size	3.17E-04
31	GO:0009961: response to 1-aminocyclopropane-1-carboxylic acid	3.17E-04
32	GO:0007188: adenylate cyclase-modulating G-protein coupled receptor signaling pathway	3.17E-04
33	GO:0015991: ATP hydrolysis coupled proton transport	4.36E-04
34	GO:0001676: long-chain fatty acid metabolic process	4.58E-04
35	GO:0006571: tyrosine biosynthetic process	4.58E-04
36	GO:0015858: nucleoside transport	4.58E-04
37	GO:0009647: skotomorphogenesis	4.58E-04
38	GO:0010587: miRNA catabolic process	4.58E-04
39	GO:0015986: ATP synthesis coupled proton transport	5.04E-04
40	GO:0031087: deadenylation-independent decapping of nuclear-transcribed mRNA	6.09E-04
41	GO:0010363: regulation of plant-type hypersensitive response	6.09E-04
42	GO:0098719: sodium ion import across plasma membrane	7.72E-04
43	GO:0097428: protein maturation by iron-sulfur cluster transfer	7.72E-04
44	GO:0006097: glyoxylate cycle	7.72E-04
45	GO:1902183: regulation of shoot apical meristem development	7.72E-04
46	GO:0009697: salicylic acid biosynthetic process	7.72E-04
47	GO:0043248: proteasome assembly	9.42E-04
48	GO:0010244: response to low fluence blue light stimulus by blue low-fluence system	1.12E-03
49	GO:0009094: L-phenylalanine biosynthetic process	1.12E-03
50	GO:0006499: N-terminal protein myristoylation	1.16E-03
51	GO:0010043: response to zinc ion	1.21E-03
52	GO:0048528: post-embryonic root development	1.31E-03
53	GO:0070370: cellular heat acclimation	1.31E-03
54	GO:0006122: mitochondrial electron transport, ubiquinol to cytochrome c	1.31E-03
55	GO:0006099: tricarboxylic acid cycle	1.38E-03
56	GO:0031540: regulation of anthocyanin biosynthetic process	1.51E-03
57	GO:0040029: regulation of gene expression, epigenetic	1.51E-03
58	GO:0006402: mRNA catabolic process	1.51E-03
59	GO:0006631: fatty acid metabolic process	1.57E-03
60	GO:0007186: G-protein coupled receptor signaling pathway	1.72E-03
61	GO:0019430: removal of superoxide radicals	1.72E-03
62	GO:0015780: nucleotide-sugar transport	1.95E-03
63	GO:0046685: response to arsenic-containing substance	1.95E-03
64	GO:0051453: regulation of intracellular pH	2.18E-03
65	GO:0000103: sulfate assimilation	2.41E-03
66	GO:0071365: cellular response to auxin stimulus	2.92E-03
67	GO:0009785: blue light signaling pathway	3.18E-03
68	GO:0090351: seedling development	3.73E-03
69	GO:0007030: Golgi organization	3.73E-03
70	GO:0015992: proton transport	4.92E-03
71	GO:0061077: chaperone-mediated protein folding	4.92E-03
72	GO:0009651: response to salt stress	5.07E-03
73	GO:0035428: hexose transmembrane transport	5.24E-03
74	GO:0001944: vasculature development	5.56E-03
75	GO:0071215: cellular response to abscisic acid stimulus	5.56E-03
76	GO:0042127: regulation of cell proliferation	5.89E-03
77	GO:0010584: pollen exine formation	5.89E-03
78	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	6.22E-03
79	GO:0000413: protein peptidyl-prolyl isomerization	6.57E-03
80	GO:0010118: stomatal movement	6.57E-03
81	GO:0006662: glycerol ether metabolic process	6.92E-03
82	GO:0046323: glucose import	6.92E-03
83	GO:0006520: cellular amino acid metabolic process	6.92E-03
84	GO:0006814: sodium ion transport	7.28E-03
85	GO:0048825: cotyledon development	7.64E-03
86	GO:0009749: response to glucose	7.64E-03
87	GO:0009791: post-embryonic development	7.64E-03
88	GO:0010193: response to ozone	8.01E-03
89	GO:0009630: gravitropism	8.39E-03
90	GO:0010286: heat acclimation	9.56E-03
91	GO:0071805: potassium ion transmembrane transport	9.56E-03
92	GO:0016579: protein deubiquitination	9.96E-03
93	GO:0010027: thylakoid membrane organization	1.04E-02
94	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	1.08E-02
95	GO:0016049: cell growth	1.21E-02
96	GO:0008219: cell death	1.25E-02
97	GO:0009817: defense response to fungus, incompatible interaction	1.25E-02
98	GO:0045454: cell redox homeostasis	1.27E-02
99	GO:0009832: plant-type cell wall biogenesis	1.29E-02
100	GO:0010119: regulation of stomatal movement	1.38E-02
101	GO:0034599: cellular response to oxidative stress	1.52E-02
102	GO:0006839: mitochondrial transport	1.62E-02
103	GO:0008283: cell proliferation	1.77E-02
104	GO:0008643: carbohydrate transport	1.87E-02
105	GO:0009636: response to toxic substance	1.92E-02
106	GO:0009409: response to cold	1.94E-02
107	GO:0006855: drug transmembrane transport	1.97E-02
108	GO:0006812: cation transport	2.08E-02
109	GO:0009846: pollen germination	2.08E-02
110	GO:0006810: transport	2.15E-02
111	GO:0009736: cytokinin-activated signaling pathway	2.19E-02
112	GO:0048316: seed development	2.52E-02
113	GO:0009735: response to cytokinin	2.55E-02
114	GO:0009740: gibberellic acid mediated signaling pathway	2.69E-02
115	GO:0009624: response to nematode	2.81E-02
116	GO:0009845: seed germination	3.49E-02
117	GO:0006457: protein folding	3.61E-02
118	GO:0055114: oxidation-reduction process	4.07E-02
119	GO:0010228: vegetative to reproductive phase transition of meristem	4.28E-02
120	GO:0009739: response to gibberellin	4.49E-02

Rank	GO Term	Adjusted P value
1	GO:0044610: FMN transmembrane transporter activity	0.00E+00
2	GO:0008670: 2,4-dienoyl-CoA reductase (NADPH) activity	0.00E+00
3	GO:0005463: UDP-N-acetylgalactosamine transmembrane transporter activity	0.00E+00
4	GO:0008117: sphinganine-1-phosphate aldolase activity	0.00E+00
5	GO:0016247: channel regulator activity	0.00E+00
6	GO:0005095: GTPase inhibitor activity	0.00E+00
7	GO:0004298: threonine-type endopeptidase activity	2.38E-32
8	GO:0008233: peptidase activity	3.74E-23
9	GO:0036402: proteasome-activating ATPase activity	1.54E-05
10	GO:0051020: GTPase binding	2.20E-05
11	GO:0015230: FAD transmembrane transporter activity	7.90E-05
12	GO:0016229: steroid dehydrogenase activity	7.90E-05
13	GO:0070401: NADP+ binding	7.90E-05
14	GO:0046961: proton-transporting ATPase activity, rotational mechanism	1.08E-04
15	GO:0016887: ATPase activity	1.24E-04
16	GO:0017025: TBP-class protein binding	1.87E-04
17	GO:0004534: 5'-3' exoribonuclease activity	1.89E-04
18	GO:0005366: myo-inositol:proton symporter activity	1.89E-04
19	GO:0008517: folic acid transporter activity	1.89E-04
20	GO:0015228: coenzyme A transmembrane transporter activity	1.89E-04
21	GO:0003994: aconitate hydratase activity	1.89E-04
22	GO:0051724: NAD transporter activity	1.89E-04
23	GO:0001664: G-protein coupled receptor binding	3.17E-04
24	GO:0008253: 5'-nucleotidase activity	3.17E-04
25	GO:0031683: G-protein beta/gamma-subunit complex binding	3.17E-04
26	GO:0017077: oxidative phosphorylation uncoupler activity	4.58E-04
27	GO:0004449: isocitrate dehydrogenase (NAD+) activity	4.58E-04
28	GO:0004791: thioredoxin-disulfide reductase activity	5.04E-04
29	GO:0015368: calcium:cation antiporter activity	6.09E-04
30	GO:0008409: 5'-3' exonuclease activity	6.09E-04
31	GO:0015369: calcium:proton antiporter activity	6.09E-04
32	GO:0080122: AMP transmembrane transporter activity	7.72E-04
33	GO:0010427: abscisic acid binding	9.42E-04
34	GO:0004602: glutathione peroxidase activity	1.12E-03
35	GO:0005347: ATP transmembrane transporter activity	1.12E-03
36	GO:0015217: ADP transmembrane transporter activity	1.12E-03
37	GO:0102391: decanoate--CoA ligase activity	1.12E-03
38	GO:0004467: long-chain fatty acid-CoA ligase activity	1.31E-03
39	GO:0016831: carboxy-lyase activity	1.31E-03
40	GO:0005338: nucleotide-sugar transmembrane transporter activity	1.31E-03
41	GO:0015491: cation:cation antiporter activity	1.51E-03
42	GO:0004033: aldo-keto reductase (NADP) activity	1.51E-03
43	GO:0005507: copper ion binding	1.69E-03
44	GO:0000989: transcription factor activity, transcription factor binding	1.95E-03
45	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	1.97E-03
46	GO:0008559: xenobiotic-transporting ATPase activity	2.66E-03
47	GO:0015386: potassium:proton antiporter activity	2.66E-03
48	GO:0008266: poly(U) RNA binding	3.45E-03
49	GO:0005528: FK506 binding	4.31E-03
50	GO:0036459: thiol-dependent ubiquitinyl hydrolase activity	4.92E-03
51	GO:0004540: ribonuclease activity	4.92E-03
52	GO:0005351: sugar:proton symporter activity	5.40E-03
53	GO:0047134: protein-disulfide reductase activity	6.22E-03
54	GO:0046933: proton-transporting ATP synthase activity, rotational mechanism	6.92E-03
55	GO:0042626: ATPase activity, coupled to transmembrane movement of substances	7.02E-03
56	GO:0005355: glucose transmembrane transporter activity	7.28E-03
57	GO:0004843: thiol-dependent ubiquitin-specific protease activity	8.01E-03
58	GO:0015385: sodium:proton antiporter activity	8.77E-03
59	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	8.77E-03
60	GO:0003993: acid phosphatase activity	1.52E-02
61	GO:0051539: 4 iron, 4 sulfur cluster binding	1.62E-02
62	GO:0004364: glutathione transferase activity	1.72E-02
63	GO:0005198: structural molecule activity	1.92E-02
64	GO:0051287: NAD binding	2.02E-02
65	GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups	2.52E-02
66	GO:0022857: transmembrane transporter activity	2.69E-02
67	GO:0051082: unfolded protein binding	2.81E-02
68	GO:0015035: protein disulfide oxidoreductase activity	2.87E-02
69	GO:0030170: pyridoxal phosphate binding	3.55E-02
70	GO:0015144: carbohydrate transmembrane transporter activity	3.75E-02
71	GO:0008565: protein transporter activity	3.75E-02
72	GO:0015297: antiporter activity	4.01E-02
73	GO:0005525: GTP binding	4.57E-02

Rank	GO Term	Adjusted P value
1	GO:0019774: proteasome core complex, beta-subunit complex	0.00E+00
2	GO:0000502: proteasome complex	1.84E-45
3	GO:0005839: proteasome core complex	2.38E-32
4	GO:0019773: proteasome core complex, alpha-subunit complex	1.40E-14
5	GO:0005774: vacuolar membrane	5.21E-12
6	GO:0005829: cytosol	1.23E-07
7	GO:0046861: glyoxysomal membrane	1.31E-06
8	GO:0005773: vacuole	9.22E-06
9	GO:0022626: cytosolic ribosome	1.56E-05
10	GO:0031597: cytosolic proteasome complex	2.20E-05
11	GO:0031595: nuclear proteasome complex	3.00E-05
12	GO:0009514: glyoxysome	5.02E-05
13	GO:0008540: proteasome regulatory particle, base subcomplex	7.61E-05
14	GO:0000325: plant-type vacuole	8.88E-05
15	GO:0008541: proteasome regulatory particle, lid subcomplex	1.08E-04
16	GO:0005783: endoplasmic reticulum	1.37E-04
17	GO:0005753: mitochondrial proton-transporting ATP synthase complex	1.87E-04
18	GO:0033178: proton-transporting two-sector ATPase complex, catalytic domain	1.89E-04
19	GO:0045271: respiratory chain complex I	2.59E-04
20	GO:0005747: mitochondrial respiratory chain complex I	2.92E-04
21	GO:0005838: proteasome regulatory particle	3.17E-04
22	GO:0033180: proton-transporting V-type ATPase, V1 domain	4.58E-04
23	GO:0000275: mitochondrial proton-transporting ATP synthase complex, catalytic core F(1)	6.09E-04
24	GO:0005844: polysome	6.09E-04
25	GO:0005737: cytoplasm	1.22E-03
26	GO:0005886: plasma membrane	1.61E-03
27	GO:0005779: integral component of peroxisomal membrane	1.72E-03
28	GO:0010494: cytoplasmic stress granule	1.95E-03
29	GO:0031966: mitochondrial membrane	2.12E-03
30	GO:0010008: endosome membrane	2.76E-03
31	GO:0005758: mitochondrial intermembrane space	4.31E-03
32	GO:0070469: respiratory chain	4.61E-03
33	GO:0009705: plant-type vacuole membrane	5.53E-03
34	GO:0005777: peroxisome	6.42E-03
35	GO:0032580: Golgi cisterna membrane	9.16E-03
36	GO:0005778: peroxisomal membrane	9.56E-03
37	GO:0000932: P-body	1.04E-02
38	GO:0005788: endoplasmic reticulum lumen	1.08E-02
39	GO:0005743: mitochondrial inner membrane	1.46E-02
40	GO:0005819: spindle	1.57E-02
41	GO:0090406: pollen tube	1.77E-02
42	GO:0009506: plasmodesma	1.99E-02
43	GO:0005789: endoplasmic reticulum membrane	2.25E-02
44	GO:0005730: nucleolus	2.56E-02
45	GO:0005834: heterotrimeric G-protein complex	2.58E-02
46	GO:0009524: phragmoplast	3.42E-02
47	GO:0005794: Golgi apparatus	3.49E-02
48	GO:0005759: mitochondrial matrix	3.88E-02