co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT2G34620

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0018316: peptide cross-linking via L-cystine	0.00E+00
2	GO:0006907: pinocytosis	0.00E+00
3	GO:0090071: negative regulation of ribosome biogenesis	0.00E+00
4	GO:0007037: vacuolar phosphate transport	0.00E+00
5	GO:0042371: vitamin K biosynthetic process	1.40E-04
6	GO:0071454: cellular response to anoxia	1.40E-04
7	GO:0045037: protein import into chloroplast stroma	2.81E-04
8	GO:1905011: transmembrane phosphate ion transport from cytosol to vacuole	3.20E-04
9	GO:0080064: 4,4-dimethyl-9beta,19-cyclopropylsterol oxidation	3.20E-04
10	GO:0080153: negative regulation of reductive pentose-phosphate cycle	3.20E-04
11	GO:0010024: phytochromobilin biosynthetic process	3.20E-04
12	GO:0010275: NAD(P)H dehydrogenase complex assembly	3.20E-04
13	GO:0051415: interphase microtubule nucleation by interphase microtubule organizing center	7.53E-04
14	GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly	7.53E-04
15	GO:0090307: mitotic spindle assembly	7.53E-04
16	GO:0031122: cytoplasmic microtubule organization	9.98E-04
17	GO:0071483: cellular response to blue light	9.98E-04
18	GO:0042274: ribosomal small subunit biogenesis	9.98E-04
19	GO:0031935: regulation of chromatin silencing	9.98E-04
20	GO:0016123: xanthophyll biosynthetic process	1.26E-03
21	GO:0009616: virus induced gene silencing	1.26E-03
22	GO:0000741: karyogamy	1.55E-03
23	GO:0035194: posttranscriptional gene silencing by RNA	1.55E-03
24	GO:0016126: sterol biosynthetic process	1.71E-03
25	GO:0017148: negative regulation of translation	1.86E-03
26	GO:0010019: chloroplast-nucleus signaling pathway	1.86E-03
27	GO:0009451: RNA modification	1.91E-03
28	GO:0010196: nonphotochemical quenching	2.18E-03
29	GO:0080111: DNA demethylation	2.18E-03
30	GO:0042255: ribosome assembly	2.52E-03
31	GO:0006353: DNA-templated transcription, termination	2.52E-03
32	GO:0071482: cellular response to light stimulus	2.88E-03
33	GO:0022900: electron transport chain	2.88E-03
34	GO:0009051: pentose-phosphate shunt, oxidative branch	3.26E-03
35	GO:0009744: response to sucrose	3.61E-03
36	GO:0045036: protein targeting to chloroplast	4.06E-03
37	GO:0006352: DNA-templated transcription, initiation	4.48E-03
38	GO:0006006: glucose metabolic process	5.37E-03
39	GO:0009725: response to hormone	5.37E-03
40	GO:0009767: photosynthetic electron transport chain	5.37E-03
41	GO:0019253: reductive pentose-phosphate cycle	5.84E-03
42	GO:0010207: photosystem II assembly	5.84E-03
43	GO:0034605: cellular response to heat	5.84E-03
44	GO:0090351: seedling development	6.32E-03
45	GO:0006863: purine nucleobase transport	6.81E-03
46	GO:0006289: nucleotide-excision repair	7.32E-03
47	GO:0007010: cytoskeleton organization	7.32E-03
48	GO:0007017: microtubule-based process	7.84E-03
49	GO:0080092: regulation of pollen tube growth	8.92E-03
50	GO:0009793: embryo development ending in seed dormancy	1.03E-02
51	GO:0070417: cellular response to cold	1.06E-02
52	GO:0008033: tRNA processing	1.12E-02
53	GO:0009958: positive gravitropism	1.18E-02
54	GO:0010197: polar nucleus fusion	1.18E-02
55	GO:0007018: microtubule-based movement	1.25E-02
56	GO:0048510: regulation of timing of transition from vegetative to reproductive phase	1.37E-02
57	GO:0016032: viral process	1.44E-02
58	GO:0032502: developmental process	1.44E-02
59	GO:0007264: small GTPase mediated signal transduction	1.44E-02
60	GO:0071805: potassium ion transmembrane transport	1.64E-02
61	GO:0006810: transport	1.67E-02
62	GO:0000910: cytokinesis	1.71E-02
63	GO:0009658: chloroplast organization	1.85E-02
64	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	1.86E-02
65	GO:0000160: phosphorelay signal transduction system	2.23E-02
66	GO:0055114: oxidation-reduction process	2.27E-02
67	GO:0080167: response to karrikin	2.30E-02
68	GO:0006260: DNA replication	3.50E-02
69	GO:0006813: potassium ion transport	3.78E-02
70	GO:0009736: cytokinin-activated signaling pathway	3.78E-02
71	GO:0008150: biological_process	4.91E-02

Rank	GO Term	Adjusted P value
1	GO:0016636: oxidoreductase activity, acting on the CH-CH group of donors, iron-sulfur protein as acceptor	0.00E+00
2	GO:0047793: cycloeucalenol cycloisomerase activity	0.00E+00
3	GO:0008935: 1,4-dihydroxy-2-naphthoyl-CoA synthase activity	0.00E+00
4	GO:1990534: thermospermine oxidase activity	0.00E+00
5	GO:0050619: phytochromobilin:ferredoxin oxidoreductase activity	0.00E+00
6	GO:0004848: ureidoglycolate hydrolase activity	5.26E-04
7	GO:0016851: magnesium chelatase activity	7.53E-04
8	GO:0043023: ribosomal large subunit binding	7.53E-04
9	GO:0000254: C-4 methylsterol oxidase activity	7.53E-04
10	GO:0004607: phosphatidylcholine-sterol O-acyltransferase activity	9.98E-04
11	GO:0001053: plastid sigma factor activity	9.98E-04
12	GO:0004345: glucose-6-phosphate dehydrogenase activity	9.98E-04
13	GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	9.98E-04
14	GO:0016987: sigma factor activity	9.98E-04
15	GO:0043015: gamma-tubulin binding	9.98E-04
16	GO:0016491: oxidoreductase activity	1.01E-03
17	GO:0048038: quinone binding	1.20E-03
18	GO:0008374: O-acyltransferase activity	1.26E-03
19	GO:0051011: microtubule minus-end binding	1.26E-03
20	GO:0004518: nuclease activity	1.27E-03
21	GO:0015631: tubulin binding	1.86E-03
22	GO:0003724: RNA helicase activity	2.88E-03
23	GO:0005089: Rho guanyl-nucleotide exchange factor activity	4.48E-03
24	GO:0003723: RNA binding	4.57E-03
25	GO:0003777: microtubule motor activity	5.37E-03
26	GO:0008131: primary amine oxidase activity	5.84E-03
27	GO:0042973: glucan endo-1,3-beta-D-glucosidase activity	5.84E-03
28	GO:0003887: DNA-directed DNA polymerase activity	6.81E-03
29	GO:0004519: endonuclease activity	7.71E-03
30	GO:0015079: potassium ion transmembrane transporter activity	7.84E-03
31	GO:0005345: purine nucleobase transmembrane transporter activity	7.84E-03
32	GO:0019843: rRNA binding	8.64E-03
33	GO:0003727: single-stranded RNA binding	1.01E-02
34	GO:0008565: protein transporter activity	1.03E-02
35	GO:0008017: microtubule binding	1.25E-02
36	GO:0010181: FMN binding	1.25E-02
37	GO:0004872: receptor activity	1.31E-02
38	GO:0000156: phosphorelay response regulator activity	1.51E-02
39	GO:0005200: structural constituent of cytoskeleton	1.64E-02
40	GO:0008483: transaminase activity	1.64E-02
41	GO:0004601: peroxidase activity	1.85E-02
42	GO:0050897: cobalt ion binding	2.39E-02
43	GO:0003746: translation elongation factor activity	2.55E-02
44	GO:0050661: NADP binding	2.80E-02
45	GO:0003674: molecular_function	2.86E-02
46	GO:0051537: 2 iron, 2 sulfur cluster binding	3.23E-02
47	GO:0003899: DNA-directed 5'-3' RNA polymerase activity	3.78E-02
48	GO:0003690: double-stranded DNA binding	3.87E-02
49	GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups	4.35E-02

Rank	GO Term	Adjusted P value
1	GO:0009507: chloroplast	4.57E-07
2	GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)	2.46E-06
3	GO:0009535: chloroplast thylakoid membrane	4.48E-05
4	GO:0008274: gamma-tubulin ring complex	3.20E-04
5	GO:0000923: equatorial microtubule organizing center	7.53E-04
6	GO:0009706: chloroplast inner membrane	9.38E-04
7	GO:0030286: dynein complex	9.98E-04
8	GO:0005623: cell	1.28E-03
9	GO:0009840: chloroplastic endopeptidase Clp complex	1.86E-03
10	GO:0000123: histone acetyltransferase complex	2.18E-03
11	GO:0009570: chloroplast stroma	3.03E-03
12	GO:0000922: spindle pole	3.26E-03
13	GO:0005874: microtubule	4.05E-03
14	GO:0016324: apical plasma membrane	4.06E-03
15	GO:0005875: microtubule associated complex	6.81E-03
16	GO:0043234: protein complex	6.81E-03
17	GO:0005622: intracellular	7.68E-03
18	GO:0042651: thylakoid membrane	7.84E-03
19	GO:0043231: intracellular membrane-bounded organelle	7.85E-03
20	GO:0015935: small ribosomal subunit	8.38E-03
21	GO:0005871: kinesin complex	1.06E-02
22	GO:0031225: anchored component of membrane	2.52E-02