GO Enrichment Analysis of Co-expressed Genes with
AT2G34310
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009661: chromoplast organization | 0.00E+00 |
| 2 | GO:0015871: choline transport | 0.00E+00 |
| 3 | GO:0009903: chloroplast avoidance movement | 1.27E-05 |
| 4 | GO:0071461: cellular response to redox state | 5.64E-05 |
| 5 | GO:0080065: 4-alpha-methyl-delta7-sterol oxidation | 5.64E-05 |
| 6 | GO:1902265: abscisic acid homeostasis | 5.64E-05 |
| 7 | GO:1904143: positive regulation of carotenoid biosynthetic process | 1.37E-04 |
| 8 | GO:0006898: receptor-mediated endocytosis | 1.37E-04 |
| 9 | GO:0090603: sieve element differentiation | 1.37E-04 |
| 10 | GO:0080005: photosystem stoichiometry adjustment | 1.37E-04 |
| 11 | GO:0007154: cell communication | 1.37E-04 |
| 12 | GO:0006696: ergosterol biosynthetic process | 2.34E-04 |
| 13 | GO:0009663: plasmodesma organization | 2.34E-04 |
| 14 | GO:0031022: nuclear migration along microfilament | 2.34E-04 |
| 15 | GO:0009150: purine ribonucleotide metabolic process | 2.34E-04 |
| 16 | GO:2001141: regulation of RNA biosynthetic process | 3.41E-04 |
| 17 | GO:0010088: phloem development | 3.41E-04 |
| 18 | GO:0010021: amylopectin biosynthetic process | 4.56E-04 |
| 19 | GO:0071483: cellular response to blue light | 4.56E-04 |
| 20 | GO:0009902: chloroplast relocation | 4.56E-04 |
| 21 | GO:0016120: carotene biosynthetic process | 5.78E-04 |
| 22 | GO:0009904: chloroplast accumulation movement | 5.78E-04 |
| 23 | GO:0010190: cytochrome b6f complex assembly | 7.07E-04 |
| 24 | GO:0010019: chloroplast-nucleus signaling pathway | 8.44E-04 |
| 25 | GO:0050821: protein stabilization | 1.13E-03 |
| 26 | GO:0009231: riboflavin biosynthetic process | 1.13E-03 |
| 27 | GO:0009787: regulation of abscisic acid-activated signaling pathway | 1.13E-03 |
| 28 | GO:0032544: plastid translation | 1.29E-03 |
| 29 | GO:0071482: cellular response to light stimulus | 1.29E-03 |
| 30 | GO:0046916: cellular transition metal ion homeostasis | 1.45E-03 |
| 31 | GO:0051555: flavonol biosynthetic process | 1.79E-03 |
| 32 | GO:0043085: positive regulation of catalytic activity | 1.97E-03 |
| 33 | GO:0006352: DNA-templated transcription, initiation | 1.97E-03 |
| 34 | GO:0006790: sulfur compound metabolic process | 2.16E-03 |
| 35 | GO:0005986: sucrose biosynthetic process | 2.36E-03 |
| 36 | GO:0030048: actin filament-based movement | 2.36E-03 |
| 37 | GO:0010207: photosystem II assembly | 2.56E-03 |
| 38 | GO:0007015: actin filament organization | 2.56E-03 |
| 39 | GO:0016226: iron-sulfur cluster assembly | 3.86E-03 |
| 40 | GO:0016117: carotenoid biosynthetic process | 4.58E-03 |
| 41 | GO:0010051: xylem and phloem pattern formation | 4.83E-03 |
| 42 | GO:0006662: glycerol ether metabolic process | 5.09E-03 |
| 43 | GO:0009658: chloroplast organization | 5.47E-03 |
| 44 | GO:0019252: starch biosynthetic process | 5.61E-03 |
| 45 | GO:0030163: protein catabolic process | 6.43E-03 |
| 46 | GO:0016126: sterol biosynthetic process | 7.59E-03 |
| 47 | GO:0010029: regulation of seed germination | 7.89E-03 |
| 48 | GO:0006508: proteolysis | 7.98E-03 |
| 49 | GO:0015995: chlorophyll biosynthetic process | 8.50E-03 |
| 50 | GO:0030244: cellulose biosynthetic process | 9.13E-03 |
| 51 | GO:0007568: aging | 1.01E-02 |
| 52 | GO:0009637: response to blue light | 1.08E-02 |
| 53 | GO:0034599: cellular response to oxidative stress | 1.11E-02 |
| 54 | GO:0030001: metal ion transport | 1.18E-02 |
| 55 | GO:0009664: plant-type cell wall organization | 1.51E-02 |
| 56 | GO:0042538: hyperosmotic salinity response | 1.51E-02 |
| 57 | GO:0009809: lignin biosynthetic process | 1.59E-02 |
| 58 | GO:0006364: rRNA processing | 1.59E-02 |
| 59 | GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process | 3.27E-02 |
| 60 | GO:0009826: unidimensional cell growth | 4.01E-02 |
| 61 | GO:0006970: response to osmotic stress | 4.34E-02 |
| 62 | GO:0080167: response to karrikin | 4.80E-02 |
| 63 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 4.91E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0016767: geranylgeranyl-diphosphate geranylgeranyltransferase activity | 0.00E+00 |
| 2 | GO:0015220: choline transmembrane transporter activity | 0.00E+00 |
| 3 | GO:0047230: flavonol-3-O-glucoside L-rhamnosyltransferase activity | 0.00E+00 |
| 4 | GO:0046905: phytoene synthase activity | 0.00E+00 |
| 5 | GO:0004180: carboxypeptidase activity | 7.23E-07 |
| 6 | GO:0016784: 3-mercaptopyruvate sulfurtransferase activity | 5.64E-05 |
| 7 | GO:0046906: tetrapyrrole binding | 5.64E-05 |
| 8 | GO:0051996: squalene synthase activity | 5.64E-05 |
| 9 | GO:0016783: sulfurtransferase activity | 5.64E-05 |
| 10 | GO:0008686: 3,4-dihydroxy-2-butanone-4-phosphate synthase activity | 1.37E-04 |
| 11 | GO:0004047: aminomethyltransferase activity | 1.37E-04 |
| 12 | GO:0033201: alpha-1,4-glucan synthase activity | 1.37E-04 |
| 13 | GO:0004310: farnesyl-diphosphate farnesyltransferase activity | 1.37E-04 |
| 14 | GO:0004373: glycogen (starch) synthase activity | 2.34E-04 |
| 15 | GO:0003935: GTP cyclohydrolase II activity | 2.34E-04 |
| 16 | GO:0003955: NAD(P)H dehydrogenase (quinone) activity | 2.34E-04 |
| 17 | GO:0050307: sucrose-phosphate phosphatase activity | 2.34E-04 |
| 18 | GO:0047627: adenylylsulfatase activity | 3.41E-04 |
| 19 | GO:0000254: C-4 methylsterol oxidase activity | 3.41E-04 |
| 20 | GO:0016851: magnesium chelatase activity | 3.41E-04 |
| 21 | GO:0004792: thiosulfate sulfurtransferase activity | 3.41E-04 |
| 22 | GO:0048038: quinone binding | 3.73E-04 |
| 23 | GO:0001053: plastid sigma factor activity | 4.56E-04 |
| 24 | GO:0016987: sigma factor activity | 4.56E-04 |
| 25 | GO:0009011: starch synthase activity | 4.56E-04 |
| 26 | GO:0008236: serine-type peptidase activity | 6.60E-04 |
| 27 | GO:0016621: cinnamoyl-CoA reductase activity | 9.85E-04 |
| 28 | GO:0019899: enzyme binding | 9.85E-04 |
| 29 | GO:0046914: transition metal ion binding | 1.29E-03 |
| 30 | GO:0031072: heat shock protein binding | 2.36E-03 |
| 31 | GO:0042973: glucan endo-1,3-beta-D-glucosidase activity | 2.56E-03 |
| 32 | GO:0004176: ATP-dependent peptidase activity | 3.63E-03 |
| 33 | GO:0047134: protein-disulfide reductase activity | 4.58E-03 |
| 34 | GO:0008080: N-acetyltransferase activity | 5.09E-03 |
| 35 | GO:0004791: thioredoxin-disulfide reductase activity | 5.35E-03 |
| 36 | GO:0050662: coenzyme binding | 5.35E-03 |
| 37 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 6.43E-03 |
| 38 | GO:0008237: metallopeptidase activity | 7.00E-03 |
| 39 | GO:0030247: polysaccharide binding | 8.50E-03 |
| 40 | GO:0004222: metalloendopeptidase activity | 9.78E-03 |
| 41 | GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors | 1.08E-02 |
| 42 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 1.59E-02 |
| 43 | GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups | 1.83E-02 |
| 44 | GO:0080043: quercetin 3-O-glucosyltransferase activity | 1.92E-02 |
| 45 | GO:0080044: quercetin 7-O-glucosyltransferase activity | 1.92E-02 |
| 46 | GO:0051082: unfolded protein binding | 2.04E-02 |
| 47 | GO:0015035: protein disulfide oxidoreductase activity | 2.09E-02 |
| 48 | GO:0016746: transferase activity, transferring acyl groups | 2.09E-02 |
| 49 | GO:0016740: transferase activity | 2.18E-02 |
| 50 | GO:0019843: rRNA binding | 2.40E-02 |
| 51 | GO:0005525: GTP binding | 2.93E-02 |
| 52 | GO:0008194: UDP-glycosyltransferase activity | 3.27E-02 |
| 53 | GO:0000287: magnesium ion binding | 4.06E-02 |
| 54 | GO:0016491: oxidoreductase activity | 4.73E-02 |
| 55 | GO:0008233: peptidase activity | 4.74E-02 |
| 56 | GO:0061630: ubiquitin protein ligase activity | 4.97E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0097218: sieve plate | 0.00E+00 |
| 2 | GO:0009507: chloroplast | 1.03E-12 |
| 3 | GO:0009535: chloroplast thylakoid membrane | 3.64E-05 |
| 4 | GO:0031969: chloroplast membrane | 9.16E-04 |
| 5 | GO:0009501: amyloplast | 1.13E-03 |
| 6 | GO:0031982: vesicle | 1.13E-03 |
| 7 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 1.45E-03 |
| 8 | GO:0005769: early endosome | 2.97E-03 |
| 9 | GO:0009536: plastid | 9.66E-03 |
| 10 | GO:0031977: thylakoid lumen | 1.22E-02 |
| 11 | GO:0005777: peroxisome | 2.05E-02 |
| 12 | GO:0009534: chloroplast thylakoid | 2.15E-02 |
| 13 | GO:0010287: plastoglobule | 2.31E-02 |
| 14 | GO:0005623: cell | 2.45E-02 |
| 15 | GO:0009524: phragmoplast | 2.49E-02 |
| 16 | GO:0009570: chloroplast stroma | 2.49E-02 |
| 17 | GO:0046658: anchored component of plasma membrane | 3.69E-02 |