GO Enrichment Analysis of Co-expressed Genes with
AT2G34260
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0072321: chaperone-mediated protein transport | 0.00E+00 |
| 2 | GO:0044843: cell cycle G1/S phase transition | 0.00E+00 |
| 3 | GO:0071731: response to nitric oxide | 0.00E+00 |
| 4 | GO:0000466: maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 0.00E+00 |
| 5 | GO:0006412: translation | 1.08E-36 |
| 6 | GO:0006364: rRNA processing | 7.48E-12 |
| 7 | GO:0042254: ribosome biogenesis | 1.75E-10 |
| 8 | GO:0006626: protein targeting to mitochondrion | 3.17E-09 |
| 9 | GO:0000470: maturation of LSU-rRNA | 5.48E-07 |
| 10 | GO:0048569: post-embryonic animal organ development | 1.66E-06 |
| 11 | GO:0045039: protein import into mitochondrial inner membrane | 6.12E-06 |
| 12 | GO:0010162: seed dormancy process | 8.96E-06 |
| 13 | GO:0042274: ribosomal small subunit biogenesis | 2.61E-05 |
| 14 | GO:0000460: maturation of 5.8S rRNA | 2.61E-05 |
| 15 | GO:0030150: protein import into mitochondrial matrix | 3.89E-05 |
| 16 | GO:0035266: meristem growth | 1.86E-04 |
| 17 | GO:0030490: maturation of SSU-rRNA | 1.86E-04 |
| 18 | GO:0000494: box C/D snoRNA 3'-end processing | 1.86E-04 |
| 19 | GO:0043985: histone H4-R3 methylation | 1.86E-04 |
| 20 | GO:1990258: histone glutamine methylation | 1.86E-04 |
| 21 | GO:0006169: adenosine salvage | 1.86E-04 |
| 22 | GO:0000469: cleavage involved in rRNA processing | 1.86E-04 |
| 23 | GO:2000072: regulation of defense response to fungus, incompatible interaction | 4.19E-04 |
| 24 | GO:0009967: positive regulation of signal transduction | 4.19E-04 |
| 25 | GO:0000463: maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 4.19E-04 |
| 26 | GO:0006413: translational initiation | 4.63E-04 |
| 27 | GO:0042256: mature ribosome assembly | 6.84E-04 |
| 28 | GO:1902626: assembly of large subunit precursor of preribosome | 6.84E-04 |
| 29 | GO:0000027: ribosomal large subunit assembly | 7.41E-04 |
| 30 | GO:0009944: polarity specification of adaxial/abaxial axis | 7.41E-04 |
| 31 | GO:0007005: mitochondrion organization | 9.73E-04 |
| 32 | GO:0033617: mitochondrial respiratory chain complex IV assembly | 9.77E-04 |
| 33 | GO:0032981: mitochondrial respiratory chain complex I assembly | 9.77E-04 |
| 34 | GO:0071215: cellular response to abscisic acid stimulus | 1.06E-03 |
| 35 | GO:0009294: DNA mediated transformation | 1.06E-03 |
| 36 | GO:0042273: ribosomal large subunit biogenesis | 1.29E-03 |
| 37 | GO:0051205: protein insertion into membrane | 1.29E-03 |
| 38 | GO:0008033: tRNA processing | 1.34E-03 |
| 39 | GO:0016569: covalent chromatin modification | 1.43E-03 |
| 40 | GO:0009553: embryo sac development | 1.49E-03 |
| 41 | GO:0006461: protein complex assembly | 1.65E-03 |
| 42 | GO:0044209: AMP salvage | 1.65E-03 |
| 43 | GO:0010375: stomatal complex patterning | 1.65E-03 |
| 44 | GO:0031167: rRNA methylation | 1.65E-03 |
| 45 | GO:0000398: mRNA splicing, via spliceosome | 1.85E-03 |
| 46 | GO:0016070: RNA metabolic process | 2.03E-03 |
| 47 | GO:0016554: cytidine to uridine editing | 2.03E-03 |
| 48 | GO:0000741: karyogamy | 2.03E-03 |
| 49 | GO:0009955: adaxial/abaxial pattern specification | 2.43E-03 |
| 50 | GO:0000054: ribosomal subunit export from nucleus | 2.43E-03 |
| 51 | GO:0000462: maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 2.43E-03 |
| 52 | GO:0000245: spliceosomal complex assembly | 2.43E-03 |
| 53 | GO:0010374: stomatal complex development | 2.87E-03 |
| 54 | GO:0000028: ribosomal small subunit assembly | 3.32E-03 |
| 55 | GO:0022900: electron transport chain | 3.80E-03 |
| 56 | GO:0001510: RNA methylation | 3.80E-03 |
| 57 | GO:0001558: regulation of cell growth | 3.80E-03 |
| 58 | GO:0007338: single fertilization | 4.30E-03 |
| 59 | GO:0048507: meristem development | 4.30E-03 |
| 60 | GO:0000387: spliceosomal snRNP assembly | 4.82E-03 |
| 61 | GO:0010449: root meristem growth | 4.82E-03 |
| 62 | GO:0030422: production of siRNA involved in RNA interference | 5.36E-03 |
| 63 | GO:0006913: nucleocytoplasmic transport | 5.92E-03 |
| 64 | GO:0006820: anion transport | 6.51E-03 |
| 65 | GO:2000012: regulation of auxin polar transport | 7.11E-03 |
| 66 | GO:0090351: seedling development | 8.37E-03 |
| 67 | GO:0010030: positive regulation of seed germination | 8.37E-03 |
| 68 | GO:0010073: meristem maintenance | 1.04E-02 |
| 69 | GO:0051302: regulation of cell division | 1.04E-02 |
| 70 | GO:0006414: translational elongation | 1.09E-02 |
| 71 | GO:0006334: nucleosome assembly | 1.11E-02 |
| 72 | GO:0040007: growth | 1.26E-02 |
| 73 | GO:0009561: megagametogenesis | 1.34E-02 |
| 74 | GO:0010305: leaf vascular tissue pattern formation | 1.58E-02 |
| 75 | GO:0010197: polar nucleus fusion | 1.58E-02 |
| 76 | GO:0080156: mitochondrial mRNA modification | 1.83E-02 |
| 77 | GO:0016032: viral process | 1.92E-02 |
| 78 | GO:0009567: double fertilization forming a zygote and endosperm | 2.10E-02 |
| 79 | GO:0016049: cell growth | 2.78E-02 |
| 80 | GO:0010311: lateral root formation | 2.98E-02 |
| 81 | GO:0006811: ion transport | 3.08E-02 |
| 82 | GO:0048527: lateral root development | 3.19E-02 |
| 83 | GO:0006099: tricarboxylic acid cycle | 3.51E-02 |
| 84 | GO:0045892: negative regulation of transcription, DNA-templated | 4.18E-02 |
| 85 | GO:0000154: rRNA modification | 4.43E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0003735: structural constituent of ribosome | 8.01E-45 |
| 2 | GO:0003723: RNA binding | 5.48E-13 |
| 3 | GO:0019843: rRNA binding | 1.14E-10 |
| 4 | GO:0004407: histone deacetylase activity | 8.81E-07 |
| 5 | GO:0003729: mRNA binding | 9.37E-07 |
| 6 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 9.79E-07 |
| 7 | GO:0030515: snoRNA binding | 1.57E-06 |
| 8 | GO:0000166: nucleotide binding | 6.73E-06 |
| 9 | GO:0001055: RNA polymerase II activity | 6.75E-06 |
| 10 | GO:0003746: translation elongation factor activity | 4.14E-05 |
| 11 | GO:0042134: rRNA primary transcript binding | 1.86E-04 |
| 12 | GO:0004001: adenosine kinase activity | 1.86E-04 |
| 13 | GO:0048037: cofactor binding | 1.86E-04 |
| 14 | GO:0004128: cytochrome-b5 reductase activity, acting on NAD(P)H | 1.86E-04 |
| 15 | GO:1990259: histone-glutamine methyltransferase activity | 1.86E-04 |
| 16 | GO:0001054: RNA polymerase I activity | 3.66E-04 |
| 17 | GO:0043021: ribonucleoprotein complex binding | 4.19E-04 |
| 18 | GO:0004775: succinate-CoA ligase (ADP-forming) activity | 4.19E-04 |
| 19 | GO:0005078: MAP-kinase scaffold activity | 4.19E-04 |
| 20 | GO:0043141: ATP-dependent 5'-3' DNA helicase activity | 4.19E-04 |
| 21 | GO:0004776: succinate-CoA ligase (GDP-forming) activity | 4.19E-04 |
| 22 | GO:0001056: RNA polymerase III activity | 4.20E-04 |
| 23 | GO:0003743: translation initiation factor activity | 6.55E-04 |
| 24 | GO:0015462: ATPase-coupled protein transmembrane transporter activity | 6.84E-04 |
| 25 | GO:0070181: small ribosomal subunit rRNA binding | 6.84E-04 |
| 26 | GO:0008649: rRNA methyltransferase activity | 6.84E-04 |
| 27 | GO:0043023: ribosomal large subunit binding | 9.77E-04 |
| 28 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 9.97E-04 |
| 29 | GO:0008026: ATP-dependent helicase activity | 1.66E-03 |
| 30 | GO:0008235: metalloexopeptidase activity | 2.87E-03 |
| 31 | GO:0015288: porin activity | 3.32E-03 |
| 32 | GO:0043022: ribosome binding | 3.32E-03 |
| 33 | GO:0008135: translation factor activity, RNA binding | 3.80E-03 |
| 34 | GO:0008308: voltage-gated anion channel activity | 3.80E-03 |
| 35 | GO:0050897: cobalt ion binding | 3.82E-03 |
| 36 | GO:0000049: tRNA binding | 6.51E-03 |
| 37 | GO:0015266: protein channel activity | 7.11E-03 |
| 38 | GO:0005528: FK506 binding | 9.71E-03 |
| 39 | GO:0051087: chaperone binding | 1.04E-02 |
| 40 | GO:0003924: GTPase activity | 1.16E-02 |
| 41 | GO:0004527: exonuclease activity | 1.58E-02 |
| 42 | GO:0010181: FMN binding | 1.66E-02 |
| 43 | GO:0016787: hydrolase activity | 1.82E-02 |
| 44 | GO:0000987: core promoter proximal region sequence-specific DNA binding | 3.51E-02 |
| 45 | GO:0005507: copper ion binding | 3.72E-02 |
| 46 | GO:0042393: histone binding | 3.74E-02 |
| 47 | GO:0051539: 4 iron, 4 sulfur cluster binding | 3.74E-02 |
| 48 | GO:0005515: protein binding | 4.04E-02 |
| 49 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 4.55E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0042719: mitochondrial intermembrane space protein transporter complex | 0.00E+00 |
| 2 | GO:0034457: Mpp10 complex | 0.00E+00 |
| 3 | GO:0005730: nucleolus | 3.18E-46 |
| 4 | GO:0005840: ribosome | 2.15E-26 |
| 5 | GO:0022626: cytosolic ribosome | 1.89E-24 |
| 6 | GO:0022625: cytosolic large ribosomal subunit | 7.09E-22 |
| 7 | GO:0022627: cytosolic small ribosomal subunit | 7.50E-22 |
| 8 | GO:0032040: small-subunit processome | 1.56E-11 |
| 9 | GO:0005829: cytosol | 4.56E-08 |
| 10 | GO:0015934: large ribosomal subunit | 1.45E-06 |
| 11 | GO:0030687: preribosome, large subunit precursor | 1.57E-06 |
| 12 | GO:0000418: DNA-directed RNA polymerase IV complex | 8.96E-06 |
| 13 | GO:0005665: DNA-directed RNA polymerase II, core complex | 1.48E-05 |
| 14 | GO:0005758: mitochondrial intermembrane space | 3.89E-05 |
| 15 | GO:0015935: small ribosomal subunit | 5.32E-05 |
| 16 | GO:0009506: plasmodesma | 5.75E-05 |
| 17 | GO:0031428: box C/D snoRNP complex | 6.24E-05 |
| 18 | GO:0005743: mitochondrial inner membrane | 7.20E-05 |
| 19 | GO:0005834: heterotrimeric G-protein complex | 1.74E-04 |
| 20 | GO:0005742: mitochondrial outer membrane translocase complex | 1.85E-04 |
| 21 | GO:0005773: vacuole | 1.98E-04 |
| 22 | GO:0005736: DNA-directed RNA polymerase I complex | 2.25E-04 |
| 23 | GO:0005732: small nucleolar ribonucleoprotein complex | 2.48E-04 |
| 24 | GO:0015030: Cajal body | 2.69E-04 |
| 25 | GO:0005666: DNA-directed RNA polymerase III complex | 2.69E-04 |
| 26 | GO:0071010: prespliceosome | 4.19E-04 |
| 27 | GO:0070545: PeBoW complex | 4.19E-04 |
| 28 | GO:0019013: viral nucleocapsid | 4.78E-04 |
| 29 | GO:0000419: DNA-directed RNA polymerase V complex | 6.69E-04 |
| 30 | GO:0034715: pICln-Sm protein complex | 6.84E-04 |
| 31 | GO:0034719: SMN-Sm protein complex | 6.84E-04 |
| 32 | GO:0005618: cell wall | 8.30E-04 |
| 33 | GO:0005741: mitochondrial outer membrane | 8.93E-04 |
| 34 | GO:0080008: Cul4-RING E3 ubiquitin ligase complex | 1.15E-03 |
| 35 | GO:0005744: mitochondrial inner membrane presequence translocase complex | 1.15E-03 |
| 36 | GO:0005747: mitochondrial respiratory chain complex I | 1.28E-03 |
| 37 | GO:0005682: U5 snRNP | 1.29E-03 |
| 38 | GO:0097526: spliceosomal tri-snRNP complex | 1.65E-03 |
| 39 | GO:0000178: exosome (RNase complex) | 1.65E-03 |
| 40 | GO:0005687: U4 snRNP | 1.65E-03 |
| 41 | GO:0005774: vacuolar membrane | 1.77E-03 |
| 42 | GO:0000243: commitment complex | 2.03E-03 |
| 43 | GO:0016363: nuclear matrix | 2.43E-03 |
| 44 | GO:0005689: U12-type spliceosomal complex | 2.43E-03 |
| 45 | GO:0005634: nucleus | 3.07E-03 |
| 46 | GO:0005688: U6 snRNP | 3.32E-03 |
| 47 | GO:0034399: nuclear periphery | 3.32E-03 |
| 48 | GO:0005737: cytoplasm | 3.72E-03 |
| 49 | GO:0046930: pore complex | 3.80E-03 |
| 50 | GO:0046540: U4/U6 x U5 tri-snRNP complex | 3.80E-03 |
| 51 | GO:0005763: mitochondrial small ribosomal subunit | 4.30E-03 |
| 52 | GO:0005685: U1 snRNP | 4.30E-03 |
| 53 | GO:0016604: nuclear body | 4.82E-03 |
| 54 | GO:0071011: precatalytic spliceosome | 4.82E-03 |
| 55 | GO:0005686: U2 snRNP | 5.36E-03 |
| 56 | GO:0005852: eukaryotic translation initiation factor 3 complex | 5.92E-03 |
| 57 | GO:0071013: catalytic step 2 spliceosome | 5.92E-03 |
| 58 | GO:0005681: spliceosomal complex | 8.59E-03 |
| 59 | GO:0005739: mitochondrion | 1.32E-02 |
| 60 | GO:0005622: intracellular | 1.42E-02 |
| 61 | GO:0005759: mitochondrial matrix | 1.63E-02 |
| 62 | GO:0016592: mediator complex | 1.92E-02 |
| 63 | GO:0030529: intracellular ribonucleoprotein complex | 2.38E-02 |
| 64 | GO:0009507: chloroplast | 3.39E-02 |