Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT2G34080

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0042430: indole-containing compound metabolic process0.00E+00
2GO:0030149: sphingolipid catabolic process0.00E+00
3GO:0042362: fat-soluble vitamin biosynthetic process0.00E+00
4GO:0042744: hydrogen peroxide catabolic process1.79E-07
5GO:1901430: positive regulation of syringal lignin biosynthetic process3.77E-05
6GO:0015812: gamma-aminobutyric acid transport3.77E-05
7GO:0009820: alkaloid metabolic process3.77E-05
8GO:0010365: positive regulation of ethylene biosynthetic process3.77E-05
9GO:1901349: glucosinolate transport3.77E-05
10GO:0090449: phloem glucosinolate loading3.77E-05
11GO:0006979: response to oxidative stress9.34E-05
12GO:0015786: UDP-glucose transport9.40E-05
13GO:0019752: carboxylic acid metabolic process9.40E-05
14GO:0006123: mitochondrial electron transport, cytochrome c to oxygen9.40E-05
15GO:0009915: phloem sucrose loading9.40E-05
16GO:0048511: rhythmic process1.03E-04
17GO:0015783: GDP-fucose transport1.63E-04
18GO:0008652: cellular amino acid biosynthetic process1.63E-04
19GO:0009413: response to flooding2.40E-04
20GO:0072334: UDP-galactose transmembrane transport2.40E-04
21GO:0051365: cellular response to potassium ion starvation3.24E-04
22GO:0009697: salicylic acid biosynthetic process4.13E-04
23GO:0010117: photoprotection4.13E-04
24GO:0006564: L-serine biosynthetic process4.13E-04
25GO:0055114: oxidation-reduction process5.07E-04
26GO:0002238: response to molecule of fungal origin5.07E-04
27GO:0009635: response to herbicide5.07E-04
28GO:0010189: vitamin E biosynthetic process6.05E-04
29GO:0010019: chloroplast-nucleus signaling pathway6.05E-04
30GO:0009648: photoperiodism6.05E-04
31GO:0006122: mitochondrial electron transport, ubiquinol to cytochrome c7.07E-04
32GO:0006102: isocitrate metabolic process8.13E-04
33GO:0006857: oligopeptide transport9.58E-04
34GO:0010206: photosystem II repair1.04E-03
35GO:0015706: nitrate transport1.53E-03
36GO:0012501: programmed cell death1.53E-03
37GO:0006820: anion transport1.53E-03
38GO:0009058: biosynthetic process1.64E-03
39GO:0009266: response to temperature stimulus1.81E-03
40GO:0002237: response to molecule of bacterial origin1.81E-03
41GO:0042343: indole glucosinolate metabolic process1.95E-03
42GO:0010167: response to nitrate1.95E-03
43GO:0006636: unsaturated fatty acid biosynthetic process2.10E-03
44GO:0000162: tryptophan biosynthetic process2.10E-03
45GO:0098542: defense response to other organism2.56E-03
46GO:0016226: iron-sulfur cluster assembly2.72E-03
47GO:0030245: cellulose catabolic process2.72E-03
48GO:0009625: response to insect2.89E-03
49GO:0006817: phosphate ion transport3.05E-03
50GO:0010089: xylem development3.05E-03
51GO:0009561: megagametogenesis3.05E-03
52GO:0006520: cellular amino acid metabolic process3.58E-03
53GO:0071555: cell wall organization3.84E-03
54GO:0000302: response to reactive oxygen species4.13E-03
55GO:0044550: secondary metabolite biosynthetic process4.40E-03
56GO:0030163: protein catabolic process4.51E-03
57GO:0006869: lipid transport5.30E-03
58GO:0042128: nitrate assimilation5.73E-03
59GO:0006811: ion transport6.82E-03
60GO:0006099: tricarboxylic acid cycle7.75E-03
61GO:0006839: mitochondrial transport8.23E-03
62GO:0042542: response to hydrogen peroxide8.71E-03
63GO:0008283: cell proliferation8.96E-03
64GO:0009735: response to cytokinin9.66E-03
65GO:0031347: regulation of defense response1.02E-02
66GO:0009611: response to wounding1.08E-02
67GO:0009793: embryo development ending in seed dormancy1.11E-02
68GO:0009809: lignin biosynthetic process1.11E-02
69GO:0048367: shoot system development1.27E-02
70GO:0055085: transmembrane transport1.34E-02
71GO:0009624: response to nematode1.42E-02
72GO:0050832: defense response to fungus1.53E-02
73GO:0006413: translational initiation1.99E-02
74GO:0040008: regulation of growth2.02E-02
75GO:0009617: response to bacterium2.37E-02
76GO:0048366: leaf development3.20E-02
77GO:0080167: response to karrikin3.32E-02
78GO:0007275: multicellular organism development4.21E-02
79GO:0032259: methylation4.25E-02
80GO:0016042: lipid catabolic process4.30E-02
81GO:0009751: response to salicylic acid4.34E-02
82GO:0048364: root development4.52E-02
83GO:0009753: response to jasmonic acid4.61E-02
84GO:0008152: metabolic process4.70E-02
RankGO TermAdjusted P value
1GO:0010176: homogentisate phytyltransferase activity0.00E+00
2GO:0008117: sphinganine-1-phosphate aldolase activity0.00E+00
3GO:0020037: heme binding1.32E-07
4GO:0004601: peroxidase activity9.65E-07
5GO:0015185: gamma-aminobutyric acid transmembrane transporter activity3.77E-05
6GO:0090448: glucosinolate:proton symporter activity3.77E-05
7GO:0004048: anthranilate phosphoribosyltransferase activity3.77E-05
8GO:0004617: phosphoglycerate dehydrogenase activity9.40E-05
9GO:0004047: aminomethyltransferase activity9.40E-05
10GO:0005457: GDP-fucose transmembrane transporter activity1.63E-04
11GO:0005460: UDP-glucose transmembrane transporter activity2.40E-04
12GO:0019201: nucleotide kinase activity2.40E-04
13GO:0004449: isocitrate dehydrogenase (NAD+) activity2.40E-04
14GO:0004659: prenyltransferase activity3.24E-04
15GO:0005459: UDP-galactose transmembrane transporter activity4.13E-04
16GO:0004866: endopeptidase inhibitor activity5.07E-04
17GO:0008200: ion channel inhibitor activity5.07E-04
18GO:0004017: adenylate kinase activity6.05E-04
19GO:0005347: ATP transmembrane transporter activity6.05E-04
20GO:0016831: carboxy-lyase activity7.07E-04
21GO:0051287: NAD binding8.11E-04
22GO:0015288: porin activity8.13E-04
23GO:0008308: voltage-gated anion channel activity9.23E-04
24GO:0016844: strictosidine synthase activity1.15E-03
25GO:0015112: nitrate transmembrane transporter activity1.15E-03
26GO:0004190: aspartic-type endopeptidase activity1.95E-03
27GO:0004867: serine-type endopeptidase inhibitor activity1.95E-03
28GO:0008134: transcription factor binding2.25E-03
29GO:0046872: metal ion binding2.47E-03
30GO:0008810: cellulase activity2.89E-03
31GO:0008514: organic anion transmembrane transporter activity3.05E-03
32GO:0016788: hydrolase activity, acting on ester bonds3.33E-03
33GO:0005199: structural constituent of cell wall3.58E-03
34GO:0005215: transporter activity4.37E-03
35GO:0016597: amino acid binding5.11E-03
36GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen5.22E-03
37GO:0043565: sequence-specific DNA binding7.77E-03
38GO:0008289: lipid binding8.28E-03
39GO:0015293: symporter activity9.73E-03
40GO:0016298: lipase activity1.13E-02
41GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups1.27E-02
42GO:0016740: transferase activity1.29E-02
43GO:0005507: copper ion binding1.51E-02
44GO:0019825: oxygen binding1.51E-02
45GO:0030170: pyridoxal phosphate binding1.79E-02
46GO:0005506: iron ion binding2.11E-02
47GO:0044212: transcription regulatory region DNA binding2.15E-02
48GO:0008194: UDP-glycosyltransferase activity2.26E-02
49GO:0003743: translation initiation factor activity2.33E-02
50GO:0008168: methyltransferase activity2.78E-02
51GO:0000287: magnesium ion binding2.81E-02
52GO:0004497: monooxygenase activity3.32E-02
53GO:0052689: carboxylic ester hydrolase activity3.57E-02
54GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting3.78E-02
55GO:0000981: RNA polymerase II transcription factor activity, sequence-specific DNA binding4.08E-02
56GO:0009055: electron carrier activity4.61E-02
RankGO TermAdjusted P value
1GO:0005576: extracellular region2.22E-05
2GO:0009526: plastid envelope3.24E-04
3GO:0009536: plastid9.00E-04
4GO:0046930: pore complex9.23E-04
5GO:0005618: cell wall1.20E-03
6GO:0005758: mitochondrial intermembrane space2.25E-03
7GO:0042651: thylakoid membrane2.40E-03
8GO:0070469: respiratory chain2.40E-03
9GO:0005741: mitochondrial outer membrane2.56E-03
10GO:0031969: chloroplast membrane4.05E-03
11GO:0009707: chloroplast outer membrane6.38E-03
12GO:0009941: chloroplast envelope6.84E-03
13GO:0005783: endoplasmic reticulum1.24E-02
14GO:0016020: membrane1.63E-02
15GO:0005774: vacuolar membrane1.86E-02
16GO:0005759: mitochondrial matrix1.95E-02
17GO:0005886: plasma membrane2.96E-02
18GO:0005773: vacuole3.17E-02
19GO:0009570: chloroplast stroma4.11E-02
20GO:0005743: mitochondrial inner membrane4.17E-02
21GO:0005794: Golgi apparatus4.98E-02
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Gene type



Gene DE type