Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT2G34040

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0006592: ornithine biosynthetic process0.00E+00
2GO:0061014: positive regulation of mRNA catabolic process1.13E-05
3GO:0010265: SCF complex assembly1.13E-05
4GO:0000291: nuclear-transcribed mRNA catabolic process, exonucleolytic1.13E-05
5GO:0006432: phenylalanyl-tRNA aminoacylation3.00E-05
6GO:0046168: glycerol-3-phosphate catabolic process5.40E-05
7GO:0008333: endosome to lysosome transport5.40E-05
8GO:0046417: chorismate metabolic process5.40E-05
9GO:0009961: response to 1-aminocyclopropane-1-carboxylic acid5.40E-05
10GO:0006072: glycerol-3-phosphate metabolic process8.23E-05
11GO:0010587: miRNA catabolic process8.23E-05
12GO:0006882: cellular zinc ion homeostasis8.23E-05
13GO:0031087: deadenylation-independent decapping of nuclear-transcribed mRNA1.14E-04
14GO:0009755: hormone-mediated signaling pathway1.14E-04
15GO:0019509: L-methionine salvage from methylthioadenosine2.25E-04
16GO:0070370: cellular heat acclimation2.66E-04
17GO:0006402: mRNA catabolic process3.08E-04
18GO:0040029: regulation of gene expression, epigenetic3.08E-04
19GO:0006526: arginine biosynthetic process3.52E-04
20GO:0010204: defense response signaling pathway, resistance gene-independent3.52E-04
21GO:0071577: zinc II ion transmembrane transport4.44E-04
22GO:0009870: defense response signaling pathway, resistance gene-dependent4.91E-04
23GO:0009073: aromatic amino acid family biosynthetic process5.39E-04
24GO:0016485: protein processing5.39E-04
25GO:0009826: unidimensional cell growth7.43E-04
26GO:0071732: cellular response to nitric oxide7.45E-04
27GO:0006012: galactose metabolic process1.08E-03
28GO:0071369: cellular response to ethylene stimulus1.08E-03
29GO:0001944: vasculature development1.08E-03
30GO:0042147: retrograde transport, endosome to Golgi1.20E-03
31GO:0010051: xylem and phloem pattern formation1.26E-03
32GO:0010154: fruit development1.33E-03
33GO:0010182: sugar mediated signaling pathway1.33E-03
34GO:0048825: cotyledon development1.46E-03
35GO:0009749: response to glucose1.46E-03
36GO:0048510: regulation of timing of transition from vegetative to reproductive phase1.52E-03
37GO:0009630: gravitropism1.59E-03
38GO:0071281: cellular response to iron ion1.66E-03
39GO:0010090: trichome morphogenesis1.66E-03
40GO:0010286: heat acclimation1.80E-03
41GO:0009627: systemic acquired resistance2.09E-03
42GO:0035556: intracellular signal transduction2.51E-03
43GO:0045087: innate immune response2.72E-03
44GO:0030001: metal ion transport2.97E-03
45GO:0006511: ubiquitin-dependent protein catabolic process3.22E-03
46GO:0009965: leaf morphogenesis3.50E-03
47GO:0051603: proteolysis involved in cellular protein catabolic process4.05E-03
48GO:0010224: response to UV-B4.05E-03
49GO:0016569: covalent chromatin modification4.83E-03
50GO:0018105: peptidyl-serine phosphorylation5.13E-03
51GO:0000398: mRNA splicing, via spliceosome5.55E-03
52GO:0010228: vegetative to reproductive phase transition of meristem7.57E-03
53GO:0009723: response to ethylene1.10E-02
54GO:0048366: leaf development1.12E-02
55GO:0046777: protein autophosphorylation1.21E-02
56GO:0045892: negative regulation of transcription, DNA-templated1.33E-02
57GO:0006886: intracellular protein transport1.34E-02
58GO:0016567: protein ubiquitination1.46E-02
59GO:0006508: proteolysis1.47E-02
60GO:0006281: DNA repair1.53E-02
61GO:0006397: mRNA processing1.57E-02
62GO:0048364: root development1.57E-02
63GO:0009873: ethylene-activated signaling pathway1.83E-02
64GO:0009908: flower development2.14E-02
65GO:0009738: abscisic acid-activated signaling pathway2.24E-02
66GO:0051301: cell division2.44E-02
67GO:0042742: defense response to bacterium3.80E-02
68GO:0030154: cell differentiation4.04E-02
69GO:0009733: response to auxin4.12E-02
70GO:0015031: protein transport4.51E-02
RankGO TermAdjusted P value
1GO:0046522: S-methyl-5-thioribose kinase activity0.00E+00
2GO:0008777: acetylornithine deacetylase activity0.00E+00
3GO:0004298: threonine-type endopeptidase activity1.78E-05
4GO:0004826: phenylalanine-tRNA ligase activity3.00E-05
5GO:0004534: 5'-3' exoribonuclease activity3.00E-05
6GO:0004106: chorismate mutase activity3.00E-05
7GO:0019172: glyoxalase III activity3.00E-05
8GO:0004367: glycerol-3-phosphate dehydrogenase [NAD+] activity5.40E-05
9GO:0008409: 5'-3' exonuclease activity1.14E-04
10GO:0008235: metalloexopeptidase activity2.66E-04
11GO:0004034: aldose 1-epimerase activity3.08E-04
12GO:0004177: aminopeptidase activity5.39E-04
13GO:0000049: tRNA binding5.89E-04
14GO:0005385: zinc ion transmembrane transporter activity8.54E-04
15GO:0008233: peptidase activity9.27E-04
16GO:0046873: metal ion transmembrane transporter activity1.33E-03
17GO:0008237: metallopeptidase activity1.80E-03
18GO:0009931: calcium-dependent protein serine/threonine kinase activity2.09E-03
19GO:0004683: calmodulin-dependent protein kinase activity2.17E-03
20GO:0000166: nucleotide binding2.38E-03
21GO:0005515: protein binding2.47E-03
22GO:0035091: phosphatidylinositol binding3.41E-03
23GO:0051287: NAD binding3.68E-03
24GO:0008565: protein transporter activity6.64E-03
25GO:0042802: identical protein binding8.67E-03
26GO:0043531: ADP binding1.06E-02
27GO:0003676: nucleic acid binding1.97E-02
28GO:0030246: carbohydrate binding2.84E-02
29GO:0005516: calmodulin binding3.07E-02
30GO:0005509: calcium ion binding3.58E-02
31GO:0005524: ATP binding4.99E-02
RankGO TermAdjusted P value
1GO:0005829: cytosol1.85E-07
2GO:0005662: DNA replication factor A complex1.13E-05
3GO:0005839: proteasome core complex1.78E-05
4GO:0080008: Cul4-RING E3 ubiquitin ligase complex4.83E-05
5GO:0009331: glycerol-3-phosphate dehydrogenase complex8.23E-05
6GO:0005844: polysome1.14E-04
7GO:0030904: retromer complex1.86E-04
8GO:0000974: Prp19 complex1.86E-04
9GO:0005771: multivesicular body1.86E-04
10GO:0000502: proteasome complex2.06E-04
11GO:0019773: proteasome core complex, alpha-subunit complex3.52E-04
12GO:0010494: cytoplasmic stress granule3.97E-04
13GO:0005737: cytoplasm4.14E-04
14GO:0071011: precatalytic spliceosome4.44E-04
15GO:0071013: catalytic step 2 spliceosome5.39E-04
16GO:0000932: P-body1.95E-03
17GO:0005819: spindle2.89E-03
18GO:0031902: late endosome membrane3.06E-03
19GO:0010008: endosome membrane4.53E-03
20GO:0009524: phragmoplast6.09E-03
21GO:0043231: intracellular membrane-bounded organelle1.64E-02
22GO:0022626: cytosolic ribosome2.22E-02
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Gene type



Gene DE type