GO Enrichment Analysis of Co-expressed Genes with
AT2G33450
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0006223: uracil salvage | 0.00E+00 |
| 2 | GO:0016553: base conversion or substitution editing | 0.00E+00 |
| 3 | GO:0002184: cytoplasmic translational termination | 0.00E+00 |
| 4 | GO:0006412: translation | 4.28E-17 |
| 5 | GO:0032544: plastid translation | 1.08E-11 |
| 6 | GO:0042254: ribosome biogenesis | 1.51E-09 |
| 7 | GO:0009735: response to cytokinin | 5.66E-09 |
| 8 | GO:0019464: glycine decarboxylation via glycine cleavage system | 2.05E-08 |
| 9 | GO:0009409: response to cold | 6.50E-07 |
| 10 | GO:0015979: photosynthesis | 2.88E-06 |
| 11 | GO:0010196: nonphotochemical quenching | 3.77E-05 |
| 12 | GO:0043489: RNA stabilization | 9.14E-05 |
| 13 | GO:0009817: defense response to fungus, incompatible interaction | 9.51E-05 |
| 14 | GO:0042742: defense response to bacterium | 1.70E-04 |
| 15 | GO:0009658: chloroplast organization | 2.16E-04 |
| 16 | GO:0010270: photosystem II oxygen evolving complex assembly | 2.16E-04 |
| 17 | GO:0045454: cell redox homeostasis | 4.09E-04 |
| 18 | GO:0010731: protein glutathionylation | 5.20E-04 |
| 19 | GO:0051085: chaperone mediated protein folding requiring cofactor | 5.20E-04 |
| 20 | GO:0006241: CTP biosynthetic process | 5.20E-04 |
| 21 | GO:0006165: nucleoside diphosphate phosphorylation | 5.20E-04 |
| 22 | GO:0006228: UTP biosynthetic process | 5.20E-04 |
| 23 | GO:2000122: negative regulation of stomatal complex development | 6.90E-04 |
| 24 | GO:0006546: glycine catabolic process | 6.90E-04 |
| 25 | GO:0010037: response to carbon dioxide | 6.90E-04 |
| 26 | GO:0015976: carbon utilization | 6.90E-04 |
| 27 | GO:0006109: regulation of carbohydrate metabolic process | 6.90E-04 |
| 28 | GO:0006183: GTP biosynthetic process | 6.90E-04 |
| 29 | GO:0045727: positive regulation of translation | 6.90E-04 |
| 30 | GO:0044206: UMP salvage | 6.90E-04 |
| 31 | GO:0006461: protein complex assembly | 8.73E-04 |
| 32 | GO:0006544: glycine metabolic process | 8.73E-04 |
| 33 | GO:0043097: pyrimidine nucleoside salvage | 8.73E-04 |
| 34 | GO:0010027: thylakoid membrane organization | 9.86E-04 |
| 35 | GO:0006563: L-serine metabolic process | 1.07E-03 |
| 36 | GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway | 1.07E-03 |
| 37 | GO:0000470: maturation of LSU-rRNA | 1.07E-03 |
| 38 | GO:0006828: manganese ion transport | 1.07E-03 |
| 39 | GO:0006206: pyrimidine nucleobase metabolic process | 1.07E-03 |
| 40 | GO:0015995: chlorophyll biosynthetic process | 1.15E-03 |
| 41 | GO:0000462: maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 1.27E-03 |
| 42 | GO:0010555: response to mannitol | 1.27E-03 |
| 43 | GO:0009955: adaxial/abaxial pattern specification | 1.27E-03 |
| 44 | GO:0042026: protein refolding | 1.27E-03 |
| 45 | GO:1901259: chloroplast rRNA processing | 1.27E-03 |
| 46 | GO:0009853: photorespiration | 1.60E-03 |
| 47 | GO:0009642: response to light intensity | 1.72E-03 |
| 48 | GO:0009657: plastid organization | 1.96E-03 |
| 49 | GO:0006783: heme biosynthetic process | 2.21E-03 |
| 50 | GO:0035999: tetrahydrofolate interconversion | 2.48E-03 |
| 51 | GO:0006782: protoporphyrinogen IX biosynthetic process | 2.75E-03 |
| 52 | GO:0043085: positive regulation of catalytic activity | 3.03E-03 |
| 53 | GO:0006816: calcium ion transport | 3.03E-03 |
| 54 | GO:0009773: photosynthetic electron transport in photosystem I | 3.03E-03 |
| 55 | GO:0009767: photosynthetic electron transport chain | 3.63E-03 |
| 56 | GO:0008152: metabolic process | 3.77E-03 |
| 57 | GO:0010020: chloroplast fission | 3.93E-03 |
| 58 | GO:0051017: actin filament bundle assembly | 4.92E-03 |
| 59 | GO:0006289: nucleotide-excision repair | 4.92E-03 |
| 60 | GO:0019344: cysteine biosynthetic process | 4.92E-03 |
| 61 | GO:0009116: nucleoside metabolic process | 4.92E-03 |
| 62 | GO:0000027: ribosomal large subunit assembly | 4.92E-03 |
| 63 | GO:0016114: terpenoid biosynthetic process | 5.62E-03 |
| 64 | GO:0009790: embryo development | 5.67E-03 |
| 65 | GO:0007005: mitochondrion organization | 5.98E-03 |
| 66 | GO:0009411: response to UV | 6.35E-03 |
| 67 | GO:0000413: protein peptidyl-prolyl isomerization | 7.51E-03 |
| 68 | GO:0046686: response to cadmium ion | 7.61E-03 |
| 69 | GO:0006662: glycerol ether metabolic process | 7.91E-03 |
| 70 | GO:0032502: developmental process | 9.60E-03 |
| 71 | GO:0009627: systemic acquired resistance | 1.28E-02 |
| 72 | GO:0080167: response to karrikin | 1.29E-02 |
| 73 | GO:0008219: cell death | 1.43E-02 |
| 74 | GO:0010119: regulation of stomatal movement | 1.59E-02 |
| 75 | GO:0009631: cold acclimation | 1.59E-02 |
| 76 | GO:0045087: innate immune response | 1.69E-02 |
| 77 | GO:0006979: response to oxidative stress | 1.71E-02 |
| 78 | GO:0034599: cellular response to oxidative stress | 1.75E-02 |
| 79 | GO:0042542: response to hydrogen peroxide | 1.97E-02 |
| 80 | GO:0006364: rRNA processing | 2.51E-02 |
| 81 | GO:0009585: red, far-red light phototransduction | 2.51E-02 |
| 82 | GO:0043086: negative regulation of catalytic activity | 2.82E-02 |
| 83 | GO:0009626: plant-type hypersensitive response | 2.96E-02 |
| 84 | GO:0006396: RNA processing | 3.29E-02 |
| 85 | GO:0006457: protein folding | 4.36E-02 |
| 86 | GO:0006633: fatty acid biosynthetic process | 4.45E-02 |
| 87 | GO:0016036: cellular response to phosphate starvation | 4.52E-02 |
| 88 | GO:0007623: circadian rhythm | 4.75E-02 |
| 89 | GO:0009793: embryo development ending in seed dormancy | 4.79E-02 |
| 90 | GO:0009451: RNA modification | 4.83E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0051738: xanthophyll binding | 0.00E+00 |
| 2 | GO:0033728: divinyl chlorophyllide a 8-vinyl-reductase activity | 0.00E+00 |
| 3 | GO:0047450: crotonoyl-[acyl-carrier-protein] hydratase activity | 0.00E+00 |
| 4 | GO:0050515: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity | 0.00E+00 |
| 5 | GO:0047538: 2-carboxy-D-arabinitol-1-phosphatase activity | 0.00E+00 |
| 6 | GO:0051744: 3,8-divinyl protochlorophyllide a 8-vinyl reductase activity | 0.00E+00 |
| 7 | GO:0019843: rRNA binding | 6.67E-22 |
| 8 | GO:0003735: structural constituent of ribosome | 2.27E-18 |
| 9 | GO:0051920: peroxiredoxin activity | 1.65E-07 |
| 10 | GO:0016209: antioxidant activity | 4.21E-07 |
| 11 | GO:0004375: glycine dehydrogenase (decarboxylating) activity | 4.05E-06 |
| 12 | GO:0008266: poly(U) RNA binding | 4.38E-06 |
| 13 | GO:0009496: plastoquinol--plastocyanin reductase activity | 9.14E-05 |
| 14 | GO:0046028: electron transporter, transferring electrons from cytochrome b6/f complex of photosystem II activity | 9.14E-05 |
| 15 | GO:0004801: sedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glyceronetransferase activity | 9.14E-05 |
| 16 | GO:0004853: uroporphyrinogen decarboxylase activity | 9.14E-05 |
| 17 | GO:0019171: 3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity | 2.16E-04 |
| 18 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 2.38E-04 |
| 19 | GO:0005528: FK506 binding | 2.85E-04 |
| 20 | GO:0045158: electron transporter, transferring electrons within cytochrome b6/f complex of photosystem II activity | 3.61E-04 |
| 21 | GO:0045174: glutathione dehydrogenase (ascorbate) activity | 3.61E-04 |
| 22 | GO:0030267: glyoxylate reductase (NADP) activity | 3.61E-04 |
| 23 | GO:0004550: nucleoside diphosphate kinase activity | 5.20E-04 |
| 24 | GO:0043023: ribosomal large subunit binding | 5.20E-04 |
| 25 | GO:0050662: coenzyme binding | 6.07E-04 |
| 26 | GO:0004845: uracil phosphoribosyltransferase activity | 6.90E-04 |
| 27 | GO:0004372: glycine hydroxymethyltransferase activity | 8.73E-04 |
| 28 | GO:0004849: uridine kinase activity | 1.27E-03 |
| 29 | GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity | 1.27E-03 |
| 30 | GO:0004601: peroxidase activity | 1.55E-03 |
| 31 | GO:0005384: manganese ion transmembrane transporter activity | 2.48E-03 |
| 32 | GO:0008047: enzyme activator activity | 2.75E-03 |
| 33 | GO:0044183: protein binding involved in protein folding | 3.03E-03 |
| 34 | GO:0004089: carbonate dehydratase activity | 3.63E-03 |
| 35 | GO:0015095: magnesium ion transmembrane transporter activity | 3.63E-03 |
| 36 | GO:0031072: heat shock protein binding | 3.63E-03 |
| 37 | GO:0051082: unfolded protein binding | 3.89E-03 |
| 38 | GO:0004857: enzyme inhibitor activity | 4.92E-03 |
| 39 | GO:0022891: substrate-specific transmembrane transporter activity | 6.35E-03 |
| 40 | GO:0047134: protein-disulfide reductase activity | 7.11E-03 |
| 41 | GO:0004791: thioredoxin-disulfide reductase activity | 8.32E-03 |
| 42 | GO:0048038: quinone binding | 9.16E-03 |
| 43 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 1.00E-02 |
| 44 | GO:0051015: actin filament binding | 1.00E-02 |
| 45 | GO:0008237: metallopeptidase activity | 1.09E-02 |
| 46 | GO:0016168: chlorophyll binding | 1.23E-02 |
| 47 | GO:0004222: metalloendopeptidase activity | 1.54E-02 |
| 48 | GO:0003824: catalytic activity | 1.90E-02 |
| 49 | GO:0004364: glutathione transferase activity | 1.97E-02 |
| 50 | GO:0051537: 2 iron, 2 sulfur cluster binding | 2.14E-02 |
| 51 | GO:0005198: structural molecule activity | 2.20E-02 |
| 52 | GO:0016491: oxidoreductase activity | 2.39E-02 |
| 53 | GO:0003729: mRNA binding | 2.78E-02 |
| 54 | GO:0003723: RNA binding | 3.03E-02 |
| 55 | GO:0015035: protein disulfide oxidoreductase activity | 3.29E-02 |
| 56 | GO:0030170: pyridoxal phosphate binding | 4.07E-02 |
| 57 | GO:0004252: serine-type endopeptidase activity | 4.07E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0044391: ribosomal subunit | 0.00E+00 |
| 2 | GO:0009507: chloroplast | 7.61E-52 |
| 3 | GO:0009570: chloroplast stroma | 3.57E-48 |
| 4 | GO:0009941: chloroplast envelope | 6.43E-46 |
| 5 | GO:0009579: thylakoid | 7.67E-32 |
| 6 | GO:0009534: chloroplast thylakoid | 3.54E-23 |
| 7 | GO:0009535: chloroplast thylakoid membrane | 3.96E-22 |
| 8 | GO:0005840: ribosome | 6.51E-18 |
| 9 | GO:0010319: stromule | 3.08E-10 |
| 10 | GO:0009543: chloroplast thylakoid lumen | 2.59E-09 |
| 11 | GO:0031977: thylakoid lumen | 4.33E-09 |
| 12 | GO:0010287: plastoglobule | 2.46E-06 |
| 13 | GO:0005960: glycine cleavage complex | 4.05E-06 |
| 14 | GO:0009533: chloroplast stromal thylakoid | 3.77E-05 |
| 15 | GO:0015934: large ribosomal subunit | 1.18E-04 |
| 16 | GO:0000311: plastid large ribosomal subunit | 1.54E-04 |
| 17 | GO:0048046: apoplast | 1.63E-04 |
| 18 | GO:0030095: chloroplast photosystem II | 2.02E-04 |
| 19 | GO:0030093: chloroplast photosystem I | 2.16E-04 |
| 20 | GO:0022626: cytosolic ribosome | 2.21E-04 |
| 21 | GO:0016020: membrane | 2.74E-04 |
| 22 | GO:0009706: chloroplast inner membrane | 4.57E-04 |
| 23 | GO:0009523: photosystem II | 6.49E-04 |
| 24 | GO:0009517: PSII associated light-harvesting complex II | 6.90E-04 |
| 25 | GO:0009512: cytochrome b6f complex | 8.73E-04 |
| 26 | GO:0009295: nucleoid | 8.83E-04 |
| 27 | GO:0009536: plastid | 1.23E-03 |
| 28 | GO:0009840: chloroplastic endopeptidase Clp complex | 1.27E-03 |
| 29 | GO:0009538: photosystem I reaction center | 1.72E-03 |
| 30 | GO:0031969: chloroplast membrane | 2.04E-03 |
| 31 | GO:0022625: cytosolic large ribosomal subunit | 2.17E-03 |
| 32 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 2.21E-03 |
| 33 | GO:0005763: mitochondrial small ribosomal subunit | 2.21E-03 |
| 34 | GO:0009508: plastid chromosome | 3.63E-03 |
| 35 | GO:0000312: plastid small ribosomal subunit | 3.93E-03 |
| 36 | GO:0009654: photosystem II oxygen evolving complex | 5.27E-03 |
| 37 | GO:0015935: small ribosomal subunit | 5.62E-03 |
| 38 | GO:0009532: plastid stroma | 5.62E-03 |
| 39 | GO:0015629: actin cytoskeleton | 6.35E-03 |
| 40 | GO:0019898: extrinsic component of membrane | 8.74E-03 |
| 41 | GO:0030529: intracellular ribonucleoprotein complex | 1.19E-02 |
| 42 | GO:0005856: cytoskeleton | 2.20E-02 |
| 43 | GO:0005759: mitochondrial matrix | 4.45E-02 |