co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT2G32090

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0080127: fruit septum development	0.00E+00
2	GO:0042493: response to drug	0.00E+00
3	GO:0061157: mRNA destabilization	0.00E+00
4	GO:0006114: glycerol biosynthetic process	0.00E+00
5	GO:0042549: photosystem II stabilization	7.50E-05
6	GO:0030091: protein repair	1.76E-04
7	GO:0048507: meristem development	2.65E-04
8	GO:0010205: photoinhibition	3.16E-04
9	GO:0006949: syncytium formation	3.71E-04
10	GO:0016311: dephosphorylation	4.24E-04
11	GO:0019684: photosynthesis, light reaction	4.29E-04
12	GO:0015979: photosynthesis	4.36E-04
13	GO:0080181: lateral root branching	4.66E-04
14	GO:0035304: regulation of protein dephosphorylation	4.66E-04
15	GO:0006741: NADP biosynthetic process	4.66E-04
16	GO:0010207: photosystem II assembly	6.29E-04
17	GO:0005977: glycogen metabolic process	7.59E-04
18	GO:0019674: NAD metabolic process	7.59E-04
19	GO:0006954: inflammatory response	7.59E-04
20	GO:0046739: transport of virus in multicellular host	1.08E-03
21	GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly	1.08E-03
22	GO:0019363: pyridine nucleotide biosynthetic process	1.08E-03
23	GO:0043433: negative regulation of sequence-specific DNA binding transcription factor activity	1.08E-03
24	GO:0009650: UV protection	1.08E-03
25	GO:0009664: plant-type cell wall organization	1.11E-03
26	GO:0009831: plant-type cell wall modification involved in multidimensional cell growth	1.23E-03
27	GO:0010021: amylopectin biosynthetic process	1.44E-03
28	GO:0009765: photosynthesis, light harvesting	1.44E-03
29	GO:0022622: root system development	1.44E-03
30	GO:0016558: protein import into peroxisome matrix	1.83E-03
31	GO:0032502: developmental process	2.21E-03
32	GO:0003006: developmental process involved in reproduction	2.26E-03
33	GO:0010190: cytochrome b6f complex assembly	2.26E-03
34	GO:0009828: plant-type cell wall loosening	2.50E-03
35	GO:0010189: vitamin E biosynthetic process	2.71E-03
36	GO:1900057: positive regulation of leaf senescence	3.20E-03
37	GO:0009645: response to low light intensity stimulus	3.20E-03
38	GO:0032880: regulation of protein localization	3.20E-03
39	GO:0009769: photosynthesis, light harvesting in photosystem II	3.20E-03
40	GO:0006605: protein targeting	3.71E-03
41	GO:0010492: maintenance of shoot apical meristem identity	3.71E-03
42	GO:0009231: riboflavin biosynthetic process	3.71E-03
43	GO:0048564: photosystem I assembly	3.71E-03
44	GO:0010497: plasmodesmata-mediated intercellular transport	4.24E-03
45	GO:0006098: pentose-phosphate shunt	4.80E-03
46	GO:0010206: photosystem II repair	4.80E-03
47	GO:0009826: unidimensional cell growth	6.30E-03
48	GO:1903507: negative regulation of nucleic acid-templated transcription	6.62E-03
49	GO:0009750: response to fructose	6.62E-03
50	GO:0009773: photosynthetic electron transport in photosystem I	6.62E-03
51	GO:0009089: lysine biosynthetic process via diaminopimelate	6.62E-03
52	GO:0010582: floral meristem determinacy	7.28E-03
53	GO:0009416: response to light stimulus	7.62E-03
54	GO:0010628: positive regulation of gene expression	7.96E-03
55	GO:0018107: peptidyl-threonine phosphorylation	7.96E-03
56	GO:0006094: gluconeogenesis	7.96E-03
57	GO:2000012: regulation of auxin polar transport	7.96E-03
58	GO:0048467: gynoecium development	8.66E-03
59	GO:0010030: positive regulation of seed germination	9.37E-03
60	GO:0019853: L-ascorbic acid biosynthetic process	9.37E-03
61	GO:0006863: purine nucleobase transport	1.01E-02
62	GO:0006833: water transport	1.01E-02
63	GO:0005992: trehalose biosynthetic process	1.09E-02
64	GO:0080147: root hair cell development	1.09E-02
65	GO:0009740: gibberellic acid mediated signaling pathway	1.15E-02
66	GO:0009768: photosynthesis, light harvesting in photosystem I	1.17E-02
67	GO:0007017: microtubule-based process	1.17E-02
68	GO:0048511: rhythmic process	1.25E-02
69	GO:0009269: response to desiccation	1.25E-02
70	GO:0009742: brassinosteroid mediated signaling pathway	1.29E-02
71	GO:0055114: oxidation-reduction process	1.31E-02
72	GO:2000022: regulation of jasmonic acid mediated signaling pathway	1.33E-02
73	GO:0019748: secondary metabolic process	1.33E-02
74	GO:0009411: response to UV	1.41E-02
75	GO:0006012: galactose metabolic process	1.41E-02
76	GO:0009306: protein secretion	1.50E-02
77	GO:0006284: base-excision repair	1.50E-02
78	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	1.59E-02
79	GO:0008284: positive regulation of cell proliferation	1.59E-02
80	GO:0034220: ion transmembrane transport	1.68E-02
81	GO:0042631: cellular response to water deprivation	1.68E-02
82	GO:0048868: pollen tube development	1.77E-02
83	GO:0046323: glucose import	1.77E-02
84	GO:0009741: response to brassinosteroid	1.77E-02
85	GO:0009958: positive gravitropism	1.77E-02
86	GO:0006814: sodium ion transport	1.86E-02
87	GO:0042752: regulation of circadian rhythm	1.86E-02
88	GO:0009749: response to glucose	1.96E-02
89	GO:0019252: starch biosynthetic process	1.96E-02
90	GO:0008654: phospholipid biosynthetic process	1.96E-02
91	GO:0040008: regulation of growth	2.01E-02
92	GO:0006635: fatty acid beta-oxidation	2.06E-02
93	GO:0048510: regulation of timing of transition from vegetative to reproductive phase	2.06E-02
94	GO:0071554: cell wall organization or biogenesis	2.06E-02
95	GO:0010193: response to ozone	2.06E-02
96	GO:0016032: viral process	2.15E-02
97	GO:0007166: cell surface receptor signaling pathway	2.42E-02
98	GO:0010027: thylakoid membrane organization	2.67E-02
99	GO:0001666: response to hypoxia	2.67E-02
100	GO:0010411: xyloglucan metabolic process	3.00E-02
101	GO:0015995: chlorophyll biosynthetic process	3.00E-02
102	GO:0018298: protein-chromophore linkage	3.23E-02
103	GO:0009817: defense response to fungus, incompatible interaction	3.23E-02
104	GO:0010218: response to far red light	3.46E-02
105	GO:0006811: ion transport	3.46E-02
106	GO:0048527: lateral root development	3.58E-02
107	GO:0009637: response to blue light	3.82E-02
108	GO:0009867: jasmonic acid mediated signaling pathway	3.82E-02
109	GO:0006810: transport	3.87E-02
110	GO:0080167: response to karrikin	4.04E-02
111	GO:0044550: secondary metabolite biosynthetic process	4.39E-02
112	GO:0010114: response to red light	4.57E-02
113	GO:0009744: response to sucrose	4.57E-02
114	GO:0051707: response to other organism	4.57E-02
115	GO:0009640: photomorphogenesis	4.57E-02
116	GO:0042546: cell wall biogenesis	4.71E-02
117	GO:0009644: response to high light intensity	4.84E-02

Rank	GO Term	Adjusted P value
1	GO:0010276: phytol kinase activity	0.00E+00
2	GO:0000906: 6,7-dimethyl-8-ribityllumazine synthase activity	0.00E+00
3	GO:0043136: glycerol-3-phosphatase activity	0.00E+00
4	GO:0000121: glycerol-1-phosphatase activity	0.00E+00
5	GO:0010349: L-galactose dehydrogenase activity	0.00E+00
6	GO:0046406: magnesium protoporphyrin IX methyltransferase activity	0.00E+00
7	GO:0042623: ATPase activity, coupled	0.00E+00
8	GO:0033743: peptide-methionine (R)-S-oxide reductase activity	1.04E-04
9	GO:0042736: NADH kinase activity	2.09E-04
10	GO:0010242: oxygen evolving activity	2.09E-04
11	GO:0019156: isoamylase activity	4.66E-04
12	GO:0008839: 4-hydroxy-tetrahydrodipicolinate reductase	4.66E-04
13	GO:0003993: acid phosphatase activity	6.47E-04
14	GO:0008508: bile acid:sodium symporter activity	1.08E-03
15	GO:0005354: galactose transmembrane transporter activity	1.08E-03
16	GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	1.44E-03
17	GO:0080032: methyl jasmonate esterase activity	1.44E-03
18	GO:0008725: DNA-3-methyladenine glycosylase activity	1.83E-03
19	GO:0004556: alpha-amylase activity	2.26E-03
20	GO:0004605: phosphatidate cytidylyltransferase activity	2.26E-03
21	GO:0080030: methyl indole-3-acetate esterase activity	2.26E-03
22	GO:0004332: fructose-bisphosphate aldolase activity	2.26E-03
23	GO:0000293: ferric-chelate reductase activity	2.26E-03
24	GO:0042578: phosphoric ester hydrolase activity	2.26E-03
25	GO:0008113: peptide-methionine (S)-S-oxide reductase activity	2.71E-03
26	GO:0008195: phosphatidate phosphatase activity	2.71E-03
27	GO:0004033: aldo-keto reductase (NADP) activity	3.71E-03
28	GO:0003951: NAD+ kinase activity	4.24E-03
29	GO:0004805: trehalose-phosphatase activity	5.99E-03
30	GO:0015020: glucuronosyltransferase activity	5.99E-03
31	GO:0005089: Rho guanyl-nucleotide exchange factor activity	6.62E-03
32	GO:0008081: phosphoric diester hydrolase activity	7.96E-03
33	GO:0008266: poly(U) RNA binding	8.66E-03
34	GO:0008083: growth factor activity	8.66E-03
35	GO:0031409: pigment binding	1.01E-02
36	GO:0016491: oxidoreductase activity	1.05E-02
37	GO:0003714: transcription corepressor activity	1.09E-02
38	GO:0005345: purine nucleobase transmembrane transporter activity	1.17E-02
39	GO:0003727: single-stranded RNA binding	1.50E-02
40	GO:0005355: glucose transmembrane transporter activity	1.86E-02
41	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	1.97E-02
42	GO:0016762: xyloglucan:xyloglucosyl transferase activity	2.06E-02
43	GO:0048038: quinone binding	2.06E-02
44	GO:0016413: O-acetyltransferase activity	2.57E-02
45	GO:0015250: water channel activity	2.67E-02
46	GO:0016168: chlorophyll binding	2.78E-02
47	GO:0016798: hydrolase activity, acting on glycosyl bonds	3.00E-02
48	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	3.23E-02
49	GO:0016788: hydrolase activity, acting on ester bonds	3.33E-02
50	GO:0005096: GTPase activator activity	3.34E-02
51	GO:0030145: manganese ion binding	3.58E-02
52	GO:0004364: glutathione transferase activity	4.45E-02
53	GO:0004185: serine-type carboxypeptidase activity	4.57E-02
54	GO:0043621: protein self-association	4.84E-02

Rank	GO Term	Adjusted P value
1	GO:0010368: chloroplast isoamylase complex	0.00E+00
2	GO:0009349: riboflavin synthase complex	0.00E+00
3	GO:0009535: chloroplast thylakoid membrane	4.09E-10
4	GO:0009507: chloroplast	5.30E-10
5	GO:0030095: chloroplast photosystem II	5.78E-07
6	GO:0009538: photosystem I reaction center	3.20E-06
7	GO:0009579: thylakoid	2.20E-05
8	GO:0009543: chloroplast thylakoid lumen	4.58E-05
9	GO:0009534: chloroplast thylakoid	1.43E-04
10	GO:0010287: plastoglobule	3.69E-04
11	GO:0031977: thylakoid lumen	7.61E-04
12	GO:0009654: photosystem II oxygen evolving complex	9.49E-04
13	GO:0009531: secondary cell wall	1.08E-03
14	GO:0030286: dynein complex	1.44E-03
15	GO:0009517: PSII associated light-harvesting complex II	1.44E-03
16	GO:0009523: photosystem II	1.94E-03
17	GO:0019898: extrinsic component of membrane	1.94E-03
18	GO:0016020: membrane	2.70E-03
19	GO:0009533: chloroplast stromal thylakoid	3.20E-03
20	GO:0009570: chloroplast stroma	4.60E-03
21	GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)	4.80E-03
22	GO:0008180: COP9 signalosome	4.80E-03
23	GO:0009941: chloroplast envelope	5.40E-03
24	GO:0031969: chloroplast membrane	8.69E-03
25	GO:0030076: light-harvesting complex	9.37E-03
26	GO:0009522: photosystem I	1.86E-02
27	GO:0005778: peroxisomal membrane	2.46E-02
28	GO:0019005: SCF ubiquitin ligase complex	3.23E-02
29	GO:0016021: integral component of membrane	4.19E-02