GO Enrichment Analysis of Co-expressed Genes with
AT2G31740
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0006592: ornithine biosynthetic process | 0.00E+00 |
| 2 | GO:0006436: tryptophanyl-tRNA aminoacylation | 4.88E-05 |
| 3 | GO:0034976: response to endoplasmic reticulum stress | 1.07E-04 |
| 4 | GO:0006435: threonyl-tRNA aminoacylation | 1.20E-04 |
| 5 | GO:0046168: glycerol-3-phosphate catabolic process | 2.06E-04 |
| 6 | GO:0070475: rRNA base methylation | 2.06E-04 |
| 7 | GO:0032981: mitochondrial respiratory chain complex I assembly | 3.01E-04 |
| 8 | GO:0001676: long-chain fatty acid metabolic process | 3.01E-04 |
| 9 | GO:0046513: ceramide biosynthetic process | 3.01E-04 |
| 10 | GO:0033617: mitochondrial respiratory chain complex IV assembly | 3.01E-04 |
| 11 | GO:0006072: glycerol-3-phosphate metabolic process | 3.01E-04 |
| 12 | GO:0071219: cellular response to molecule of bacterial origin | 4.04E-04 |
| 13 | GO:0080142: regulation of salicylic acid biosynthetic process | 4.04E-04 |
| 14 | GO:0045116: protein neddylation | 5.13E-04 |
| 15 | GO:0036065: fucosylation | 5.13E-04 |
| 16 | GO:0009612: response to mechanical stimulus | 7.50E-04 |
| 17 | GO:1901001: negative regulation of response to salt stress | 7.50E-04 |
| 18 | GO:0015937: coenzyme A biosynthetic process | 8.75E-04 |
| 19 | GO:0050821: protein stabilization | 1.01E-03 |
| 20 | GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline | 1.01E-03 |
| 21 | GO:0006367: transcription initiation from RNA polymerase II promoter | 1.14E-03 |
| 22 | GO:0006526: arginine biosynthetic process | 1.14E-03 |
| 23 | GO:0010112: regulation of systemic acquired resistance | 1.28E-03 |
| 24 | GO:0042761: very long-chain fatty acid biosynthetic process | 1.43E-03 |
| 25 | GO:1900426: positive regulation of defense response to bacterium | 1.43E-03 |
| 26 | GO:0043067: regulation of programmed cell death | 1.43E-03 |
| 27 | GO:0048316: seed development | 1.49E-03 |
| 28 | GO:0009626: plant-type hypersensitive response | 1.54E-03 |
| 29 | GO:0006298: mismatch repair | 1.59E-03 |
| 30 | GO:0006312: mitotic recombination | 1.91E-03 |
| 31 | GO:0090351: seedling development | 2.44E-03 |
| 32 | GO:0009969: xyloglucan biosynthetic process | 2.44E-03 |
| 33 | GO:0030150: protein import into mitochondrial matrix | 2.81E-03 |
| 34 | GO:0006418: tRNA aminoacylation for protein translation | 3.01E-03 |
| 35 | GO:0042147: retrograde transport, endosome to Golgi | 4.04E-03 |
| 36 | GO:0008033: tRNA processing | 4.26E-03 |
| 37 | GO:0048868: pollen tube development | 4.48E-03 |
| 38 | GO:0010154: fruit development | 4.48E-03 |
| 39 | GO:0010183: pollen tube guidance | 4.94E-03 |
| 40 | GO:0002229: defense response to oomycetes | 5.18E-03 |
| 41 | GO:0010193: response to ozone | 5.18E-03 |
| 42 | GO:0042742: defense response to bacterium | 5.89E-03 |
| 43 | GO:0009567: double fertilization forming a zygote and endosperm | 5.91E-03 |
| 44 | GO:0045454: cell redox homeostasis | 6.74E-03 |
| 45 | GO:0009627: systemic acquired resistance | 7.20E-03 |
| 46 | GO:0009832: plant-type cell wall biogenesis | 8.31E-03 |
| 47 | GO:0010043: response to zinc ion | 8.88E-03 |
| 48 | GO:0046686: response to cadmium ion | 1.03E-02 |
| 49 | GO:0006631: fatty acid metabolic process | 1.07E-02 |
| 50 | GO:0009926: auxin polar transport | 1.13E-02 |
| 51 | GO:0051707: response to other organism | 1.13E-02 |
| 52 | GO:0009846: pollen germination | 1.33E-02 |
| 53 | GO:0006486: protein glycosylation | 1.40E-02 |
| 54 | GO:0010224: response to UV-B | 1.43E-02 |
| 55 | GO:0009555: pollen development | 1.48E-02 |
| 56 | GO:0009553: embryo sac development | 1.76E-02 |
| 57 | GO:0018105: peptidyl-serine phosphorylation | 1.83E-02 |
| 58 | GO:0006457: protein folding | 1.92E-02 |
| 59 | GO:0006414: translational elongation | 2.21E-02 |
| 60 | GO:0009845: seed germination | 2.23E-02 |
| 61 | GO:0009790: embryo development | 2.35E-02 |
| 62 | GO:0006413: translational initiation | 2.52E-02 |
| 63 | GO:0009617: response to bacterium | 3.00E-02 |
| 64 | GO:0009860: pollen tube growth | 3.81E-02 |
| 65 | GO:0015031: protein transport | 3.81E-02 |
| 66 | GO:0080167: response to karrikin | 4.21E-02 |
| 67 | GO:0046777: protein autophosphorylation | 4.41E-02 |
| 68 | GO:0006886: intracellular protein transport | 4.89E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0008777: acetylornithine deacetylase activity | 0.00E+00 |
| 2 | GO:0016639: oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor | 0.00E+00 |
| 3 | GO:0016881: acid-amino acid ligase activity | 0.00E+00 |
| 4 | GO:0005212: structural constituent of eye lens | 0.00E+00 |
| 5 | GO:0003746: translation elongation factor activity | 3.90E-05 |
| 6 | GO:0047326: inositol tetrakisphosphate 5-kinase activity | 4.88E-05 |
| 7 | GO:0000823: inositol-1,4,5-trisphosphate 6-kinase activity | 4.88E-05 |
| 8 | GO:0004830: tryptophan-tRNA ligase activity | 4.88E-05 |
| 9 | GO:0008440: inositol-1,4,5-trisphosphate 3-kinase activity | 4.88E-05 |
| 10 | GO:0000824: inositol tetrakisphosphate 3-kinase activity | 4.88E-05 |
| 11 | GO:0004829: threonine-tRNA ligase activity | 1.20E-04 |
| 12 | GO:0019903: protein phosphatase binding | 1.20E-04 |
| 13 | GO:0050291: sphingosine N-acyltransferase activity | 1.20E-04 |
| 14 | GO:0004594: pantothenate kinase activity | 1.20E-04 |
| 15 | GO:0019781: NEDD8 activating enzyme activity | 1.20E-04 |
| 16 | GO:0003756: protein disulfide isomerase activity | 1.96E-04 |
| 17 | GO:0004367: glycerol-3-phosphate dehydrogenase [NAD+] activity | 2.06E-04 |
| 18 | GO:0008237: metallopeptidase activity | 4.00E-04 |
| 19 | GO:0008641: small protein activating enzyme activity | 5.13E-04 |
| 20 | GO:0031593: polyubiquitin binding | 6.29E-04 |
| 21 | GO:0030983: mismatched DNA binding | 6.29E-04 |
| 22 | GO:0004656: procollagen-proline 4-dioxygenase activity | 7.50E-04 |
| 23 | GO:0102391: decanoate--CoA ligase activity | 7.50E-04 |
| 24 | GO:0004467: long-chain fatty acid-CoA ligase activity | 8.75E-04 |
| 25 | GO:0008107: galactoside 2-alpha-L-fucosyltransferase activity | 8.75E-04 |
| 26 | GO:0030674: protein binding, bridging | 1.01E-03 |
| 27 | GO:0008173: RNA methyltransferase activity | 1.14E-03 |
| 28 | GO:0008417: fucosyltransferase activity | 1.28E-03 |
| 29 | GO:0003712: transcription cofactor activity | 2.44E-03 |
| 30 | GO:0005524: ATP binding | 2.69E-03 |
| 31 | GO:0031418: L-ascorbic acid binding | 2.81E-03 |
| 32 | GO:0004812: aminoacyl-tRNA ligase activity | 4.04E-03 |
| 33 | GO:0016853: isomerase activity | 4.71E-03 |
| 34 | GO:0010181: FMN binding | 4.71E-03 |
| 35 | GO:0043531: ADP binding | 4.99E-03 |
| 36 | GO:0003824: catalytic activity | 6.62E-03 |
| 37 | GO:0009931: calcium-dependent protein serine/threonine kinase activity | 7.20E-03 |
| 38 | GO:0004683: calmodulin-dependent protein kinase activity | 7.48E-03 |
| 39 | GO:0004806: triglyceride lipase activity | 7.48E-03 |
| 40 | GO:0008757: S-adenosylmethionine-dependent methyltransferase activity | 7.75E-03 |
| 41 | GO:0003697: single-stranded DNA binding | 9.47E-03 |
| 42 | GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors | 9.47E-03 |
| 43 | GO:0003993: acid phosphatase activity | 9.77E-03 |
| 44 | GO:0051539: 4 iron, 4 sulfur cluster binding | 1.04E-02 |
| 45 | GO:0016887: ATPase activity | 1.29E-02 |
| 46 | GO:0051287: NAD binding | 1.30E-02 |
| 47 | GO:0000166: nucleotide binding | 1.48E-02 |
| 48 | GO:0022857: transmembrane transporter activity | 1.72E-02 |
| 49 | GO:0019843: rRNA binding | 2.10E-02 |
| 50 | GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | 2.14E-02 |
| 51 | GO:0005516: calmodulin binding | 2.23E-02 |
| 52 | GO:0016829: lyase activity | 2.23E-02 |
| 53 | GO:0008565: protein transporter activity | 2.39E-02 |
| 54 | GO:0005525: GTP binding | 2.44E-02 |
| 55 | GO:0005509: calcium ion binding | 2.77E-02 |
| 56 | GO:0003743: translation initiation factor activity | 2.96E-02 |
| 57 | GO:0046982: protein heterodimerization activity | 3.56E-02 |
| 58 | GO:0046872: metal ion binding | 3.92E-02 |
| 59 | GO:0008233: peptidase activity | 4.16E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0005674: transcription factor TFIIF complex | 0.00E+00 |
| 2 | GO:0000327: lytic vacuole within protein storage vacuole | 0.00E+00 |
| 3 | GO:0032389: MutLalpha complex | 4.88E-05 |
| 4 | GO:0005712: chiasma | 4.88E-05 |
| 5 | GO:0046861: glyoxysomal membrane | 2.06E-04 |
| 6 | GO:0009331: glycerol-3-phosphate dehydrogenase complex | 3.01E-04 |
| 7 | GO:0005829: cytosol | 3.38E-04 |
| 8 | GO:0005783: endoplasmic reticulum | 4.21E-04 |
| 9 | GO:0000795: synaptonemal complex | 5.13E-04 |
| 10 | GO:0030904: retromer complex | 6.29E-04 |
| 11 | GO:0005794: Golgi apparatus | 1.05E-03 |
| 12 | GO:0000326: protein storage vacuole | 1.14E-03 |
| 13 | GO:0009514: glyoxysome | 1.14E-03 |
| 14 | GO:0005774: vacuolar membrane | 1.73E-03 |
| 15 | GO:0005744: mitochondrial inner membrane presequence translocase complex | 3.82E-03 |
| 16 | GO:0000790: nuclear chromatin | 4.04E-03 |
| 17 | GO:0032580: Golgi cisterna membrane | 5.91E-03 |
| 18 | GO:0005788: endoplasmic reticulum lumen | 6.94E-03 |
| 19 | GO:0009505: plant-type cell wall | 7.84E-03 |
| 20 | GO:0015934: large ribosomal subunit | 8.88E-03 |
| 21 | GO:0005789: endoplasmic reticulum membrane | 1.01E-02 |
| 22 | GO:0031902: late endosome membrane | 1.07E-02 |
| 23 | GO:0090406: pollen tube | 1.13E-02 |
| 24 | GO:0005834: heterotrimeric G-protein complex | 1.65E-02 |
| 25 | GO:0005623: cell | 2.14E-02 |
| 26 | GO:0005802: trans-Golgi network | 2.37E-02 |
| 27 | GO:0005768: endosome | 2.70E-02 |
| 28 | GO:0080008: Cul4-RING E3 ubiquitin ligase complex | 3.86E-02 |