GO Enrichment Analysis of Co-expressed Genes with
AT2G31610
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0000740: nuclear membrane fusion | 0.00E+00 |
| 2 | GO:1903070: negative regulation of ER-associated ubiquitin-dependent protein catabolic process | 0.00E+00 |
| 3 | GO:0044843: cell cycle G1/S phase transition | 0.00E+00 |
| 4 | GO:1903857: negative regulation of cytokinin dehydrogenase activity | 0.00E+00 |
| 5 | GO:0000494: box C/D snoRNA 3'-end processing | 0.00E+00 |
| 6 | GO:1990258: histone glutamine methylation | 0.00E+00 |
| 7 | GO:1990569: UDP-N-acetylglucosamine transmembrane transport | 0.00E+00 |
| 8 | GO:0015789: UDP-N-acetylgalactosamine transport | 0.00E+00 |
| 9 | GO:0006412: translation | 1.19E-142 |
| 10 | GO:0042254: ribosome biogenesis | 5.39E-50 |
| 11 | GO:0000027: ribosomal large subunit assembly | 3.26E-11 |
| 12 | GO:0006626: protein targeting to mitochondrion | 3.77E-08 |
| 13 | GO:0000028: ribosomal small subunit assembly | 1.37E-07 |
| 14 | GO:0009955: adaxial/abaxial pattern specification | 4.72E-06 |
| 15 | GO:0045041: protein import into mitochondrial intermembrane space | 5.43E-06 |
| 16 | GO:0009967: positive regulation of signal transduction | 5.43E-06 |
| 17 | GO:0009735: response to cytokinin | 1.69E-05 |
| 18 | GO:1902626: assembly of large subunit precursor of preribosome | 1.92E-05 |
| 19 | GO:0002181: cytoplasmic translation | 1.92E-05 |
| 20 | GO:0031167: rRNA methylation | 1.18E-04 |
| 21 | GO:0030150: protein import into mitochondrial matrix | 1.50E-04 |
| 22 | GO:0042026: protein refolding | 2.30E-04 |
| 23 | GO:0006458: 'de novo' protein folding | 2.30E-04 |
| 24 | GO:0030490: maturation of SSU-rRNA | 3.47E-04 |
| 25 | GO:0000461: endonucleolytic cleavage to generate mature 3'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 3.47E-04 |
| 26 | GO:0000447: endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 3.47E-04 |
| 27 | GO:0006407: rRNA export from nucleus | 3.47E-04 |
| 28 | GO:0015801: aromatic amino acid transport | 3.47E-04 |
| 29 | GO:0001510: RNA methylation | 4.61E-04 |
| 30 | GO:0006364: rRNA processing | 5.16E-04 |
| 31 | GO:0000387: spliceosomal snRNP assembly | 6.53E-04 |
| 32 | GO:2000072: regulation of defense response to fungus, incompatible interaction | 7.56E-04 |
| 33 | GO:0048569: post-embryonic animal organ development | 7.56E-04 |
| 34 | GO:0010198: synergid death | 7.56E-04 |
| 35 | GO:0015786: UDP-glucose transport | 7.56E-04 |
| 36 | GO:0006820: anion transport | 1.00E-03 |
| 37 | GO:0015783: GDP-fucose transport | 1.22E-03 |
| 38 | GO:0034227: tRNA thio-modification | 1.22E-03 |
| 39 | GO:0010476: gibberellin mediated signaling pathway | 1.22E-03 |
| 40 | GO:0042256: mature ribosome assembly | 1.22E-03 |
| 41 | GO:0046168: glycerol-3-phosphate catabolic process | 1.22E-03 |
| 42 | GO:0006954: inflammatory response | 1.22E-03 |
| 43 | GO:0006414: translational elongation | 1.32E-03 |
| 44 | GO:0046513: ceramide biosynthetic process | 1.76E-03 |
| 45 | GO:0070301: cellular response to hydrogen peroxide | 1.76E-03 |
| 46 | GO:0051085: chaperone mediated protein folding requiring cofactor | 1.76E-03 |
| 47 | GO:0006241: CTP biosynthetic process | 1.76E-03 |
| 48 | GO:0072334: UDP-galactose transmembrane transport | 1.76E-03 |
| 49 | GO:0010971: positive regulation of G2/M transition of mitotic cell cycle | 1.76E-03 |
| 50 | GO:0006072: glycerol-3-phosphate metabolic process | 1.76E-03 |
| 51 | GO:0006165: nucleoside diphosphate phosphorylation | 1.76E-03 |
| 52 | GO:0006228: UTP biosynthetic process | 1.76E-03 |
| 53 | GO:0006164: purine nucleotide biosynthetic process | 1.76E-03 |
| 54 | GO:0006289: nucleotide-excision repair | 1.76E-03 |
| 55 | GO:0009558: embryo sac cellularization | 1.76E-03 |
| 56 | GO:0061077: chaperone-mediated protein folding | 2.13E-03 |
| 57 | GO:0009793: embryo development ending in seed dormancy | 2.21E-03 |
| 58 | GO:0042274: ribosomal small subunit biogenesis | 2.37E-03 |
| 59 | GO:0010387: COP9 signalosome assembly | 2.37E-03 |
| 60 | GO:0006183: GTP biosynthetic process | 2.37E-03 |
| 61 | GO:0071215: cellular response to abscisic acid stimulus | 2.54E-03 |
| 62 | GO:1902183: regulation of shoot apical meristem development | 3.03E-03 |
| 63 | GO:0008033: tRNA processing | 3.24E-03 |
| 64 | GO:0010197: polar nucleus fusion | 3.49E-03 |
| 65 | GO:0000470: maturation of LSU-rRNA | 3.74E-03 |
| 66 | GO:0000741: karyogamy | 3.74E-03 |
| 67 | GO:0045040: protein import into mitochondrial outer membrane | 3.74E-03 |
| 68 | GO:0000245: spliceosomal complex assembly | 4.50E-03 |
| 69 | GO:0009648: photoperiodism | 4.50E-03 |
| 70 | GO:0009612: response to mechanical stimulus | 4.50E-03 |
| 71 | GO:0000338: protein deneddylation | 5.32E-03 |
| 72 | GO:0050821: protein stabilization | 6.17E-03 |
| 73 | GO:0010093: specification of floral organ identity | 7.08E-03 |
| 74 | GO:0001558: regulation of cell growth | 7.08E-03 |
| 75 | GO:0010100: negative regulation of photomorphogenesis | 7.08E-03 |
| 76 | GO:0006189: 'de novo' IMP biosynthetic process | 8.04E-03 |
| 77 | GO:0015780: nucleotide-sugar transport | 8.04E-03 |
| 78 | GO:0098656: anion transmembrane transport | 8.04E-03 |
| 79 | GO:0007338: single fertilization | 8.04E-03 |
| 80 | GO:0009245: lipid A biosynthetic process | 8.04E-03 |
| 81 | GO:0048507: meristem development | 8.04E-03 |
| 82 | GO:0042761: very long-chain fatty acid biosynthetic process | 9.03E-03 |
| 83 | GO:0010015: root morphogenesis | 1.12E-02 |
| 84 | GO:0006913: nucleocytoplasmic transport | 1.12E-02 |
| 85 | GO:0015770: sucrose transport | 1.12E-02 |
| 86 | GO:0010102: lateral root morphogenesis | 1.34E-02 |
| 87 | GO:0008283: cell proliferation | 1.34E-02 |
| 88 | GO:0048467: gynoecium development | 1.46E-02 |
| 89 | GO:0009965: leaf morphogenesis | 1.50E-02 |
| 90 | GO:0051302: regulation of cell division | 1.98E-02 |
| 91 | GO:0051260: protein homooligomerization | 2.12E-02 |
| 92 | GO:0010431: seed maturation | 2.12E-02 |
| 93 | GO:0003333: amino acid transmembrane transport | 2.12E-02 |
| 94 | GO:0007005: mitochondrion organization | 2.26E-02 |
| 95 | GO:0040007: growth | 2.40E-02 |
| 96 | GO:0009553: embryo sac development | 2.50E-02 |
| 97 | GO:0010584: pollen exine formation | 2.55E-02 |
| 98 | GO:0000413: protein peptidyl-prolyl isomerization | 2.85E-02 |
| 99 | GO:0000398: mRNA splicing, via spliceosome | 2.97E-02 |
| 100 | GO:0010183: pollen tube guidance | 3.33E-02 |
| 101 | GO:0009749: response to glucose | 3.33E-02 |
| 102 | GO:0009845: seed germination | 3.48E-02 |
| 103 | GO:0000302: response to reactive oxygen species | 3.50E-02 |
| 104 | GO:0009567: double fertilization forming a zygote and endosperm | 4.01E-02 |
| 105 | GO:0016579: protein deubiquitination | 4.36E-02 |
| 106 | GO:0009627: systemic acquired resistance | 4.91E-02 |
| 107 | GO:0009739: response to gibberellin | 4.95E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:1990259: histone-glutamine methyltransferase activity | 0.00E+00 |
| 2 | GO:0005463: UDP-N-acetylgalactosamine transmembrane transporter activity | 0.00E+00 |
| 3 | GO:0004641: phosphoribosylformylglycinamidine cyclo-ligase activity | 0.00E+00 |
| 4 | GO:0003735: structural constituent of ribosome | 1.77E-174 |
| 5 | GO:0003729: mRNA binding | 1.84E-37 |
| 6 | GO:0019843: rRNA binding | 1.34E-17 |
| 7 | GO:0005078: MAP-kinase scaffold activity | 5.43E-06 |
| 8 | GO:0008649: rRNA methyltransferase activity | 1.92E-05 |
| 9 | GO:0008097: 5S rRNA binding | 4.24E-05 |
| 10 | GO:0044183: protein binding involved in protein folding | 4.96E-05 |
| 11 | GO:0003723: RNA binding | 1.26E-04 |
| 12 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 1.40E-04 |
| 13 | GO:0030515: snoRNA binding | 2.99E-04 |
| 14 | GO:0008440: inositol-1,4,5-trisphosphate 3-kinase activity | 3.47E-04 |
| 15 | GO:0000824: inositol tetrakisphosphate 3-kinase activity | 3.47E-04 |
| 16 | GO:0047326: inositol tetrakisphosphate 5-kinase activity | 3.47E-04 |
| 17 | GO:0000823: inositol-1,4,5-trisphosphate 6-kinase activity | 3.47E-04 |
| 18 | GO:0015288: porin activity | 3.76E-04 |
| 19 | GO:0008308: voltage-gated anion channel activity | 4.61E-04 |
| 20 | GO:0050291: sphingosine N-acyltransferase activity | 7.56E-04 |
| 21 | GO:0015173: aromatic amino acid transmembrane transporter activity | 7.56E-04 |
| 22 | GO:0043141: ATP-dependent 5'-3' DNA helicase activity | 7.56E-04 |
| 23 | GO:0051082: unfolded protein binding | 8.84E-04 |
| 24 | GO:0015266: protein channel activity | 1.13E-03 |
| 25 | GO:0004367: glycerol-3-phosphate dehydrogenase [NAD+] activity | 1.22E-03 |
| 26 | GO:0005457: GDP-fucose transmembrane transporter activity | 1.22E-03 |
| 27 | GO:0015462: ATPase-coupled protein transmembrane transporter activity | 1.22E-03 |
| 28 | GO:0032947: protein complex scaffold | 1.22E-03 |
| 29 | GO:0005460: UDP-glucose transmembrane transporter activity | 1.76E-03 |
| 30 | GO:0004550: nucleoside diphosphate kinase activity | 1.76E-03 |
| 31 | GO:0070628: proteasome binding | 2.37E-03 |
| 32 | GO:0005459: UDP-galactose transmembrane transporter activity | 3.03E-03 |
| 33 | GO:0005275: amine transmembrane transporter activity | 3.03E-03 |
| 34 | GO:0031593: polyubiquitin binding | 3.74E-03 |
| 35 | GO:0031177: phosphopantetheine binding | 3.74E-03 |
| 36 | GO:0000035: acyl binding | 4.50E-03 |
| 37 | GO:0005338: nucleotide-sugar transmembrane transporter activity | 5.32E-03 |
| 38 | GO:0008235: metalloexopeptidase activity | 5.32E-03 |
| 39 | GO:0008237: metallopeptidase activity | 5.55E-03 |
| 40 | GO:0000036: ACP phosphopantetheine attachment site binding involved in fatty acid biosynthetic process | 6.17E-03 |
| 41 | GO:0000989: transcription factor activity, transcription factor binding | 8.04E-03 |
| 42 | GO:0001055: RNA polymerase II activity | 9.03E-03 |
| 43 | GO:0003746: translation elongation factor activity | 1.03E-02 |
| 44 | GO:0001054: RNA polymerase I activity | 1.12E-02 |
| 45 | GO:0008515: sucrose transmembrane transporter activity | 1.12E-02 |
| 46 | GO:0008327: methyl-CpG binding | 1.12E-02 |
| 47 | GO:0001056: RNA polymerase III activity | 1.23E-02 |
| 48 | GO:0031072: heat shock protein binding | 1.34E-02 |
| 49 | GO:0051119: sugar transmembrane transporter activity | 1.59E-02 |
| 50 | GO:0043130: ubiquitin binding | 1.85E-02 |
| 51 | GO:0051087: chaperone binding | 1.98E-02 |
| 52 | GO:0036459: thiol-dependent ubiquitinyl hydrolase activity | 2.12E-02 |
| 53 | GO:0004298: threonine-type endopeptidase activity | 2.12E-02 |
| 54 | GO:0008233: peptidase activity | 2.19E-02 |
| 55 | GO:0008514: organic anion transmembrane transporter activity | 2.55E-02 |
| 56 | GO:0003684: damaged DNA binding | 4.01E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0043186: P granule | 0.00E+00 |
| 2 | GO:0005675: holo TFIIH complex | 0.00E+00 |
| 3 | GO:0005840: ribosome | 4.02E-124 |
| 4 | GO:0022625: cytosolic large ribosomal subunit | 1.25E-110 |
| 5 | GO:0022626: cytosolic ribosome | 3.06E-108 |
| 6 | GO:0022627: cytosolic small ribosomal subunit | 1.13E-65 |
| 7 | GO:0005737: cytoplasm | 8.93E-41 |
| 8 | GO:0005730: nucleolus | 4.90E-35 |
| 9 | GO:0005829: cytosol | 1.09E-31 |
| 10 | GO:0009506: plasmodesma | 2.96E-21 |
| 11 | GO:0015934: large ribosomal subunit | 4.55E-20 |
| 12 | GO:0005774: vacuolar membrane | 3.14E-18 |
| 13 | GO:0016020: membrane | 3.85E-14 |
| 14 | GO:0015935: small ribosomal subunit | 4.84E-09 |
| 15 | GO:0005773: vacuole | 3.22E-08 |
| 16 | GO:0005618: cell wall | 1.13E-07 |
| 17 | GO:0005886: plasma membrane | 1.44E-06 |
| 18 | GO:0005732: small nucleolar ribonucleoprotein complex | 1.80E-05 |
| 19 | GO:0009507: chloroplast | 4.02E-05 |
| 20 | GO:0031428: box C/D snoRNP complex | 1.70E-04 |
| 21 | GO:0030686: 90S preribosome | 3.47E-04 |
| 22 | GO:0046930: pore complex | 4.61E-04 |
| 23 | GO:0005742: mitochondrial outer membrane translocase complex | 4.61E-04 |
| 24 | GO:0071011: precatalytic spliceosome | 6.53E-04 |
| 25 | GO:0015030: Cajal body | 6.53E-04 |
| 26 | GO:0071013: catalytic step 2 spliceosome | 8.76E-04 |
| 27 | GO:0032040: small-subunit processome | 1.00E-03 |
| 28 | GO:0019013: viral nucleocapsid | 1.13E-03 |
| 29 | GO:0000439: core TFIIH complex | 1.22E-03 |
| 30 | GO:0034719: SMN-Sm protein complex | 1.22E-03 |
| 31 | GO:1990726: Lsm1-7-Pat1 complex | 1.76E-03 |
| 32 | GO:0005758: mitochondrial intermembrane space | 1.76E-03 |
| 33 | GO:0009331: glycerol-3-phosphate dehydrogenase complex | 1.76E-03 |
| 34 | GO:0005741: mitochondrial outer membrane | 2.13E-03 |
| 35 | GO:0005682: U5 snRNP | 2.37E-03 |
| 36 | GO:0005687: U4 snRNP | 3.03E-03 |
| 37 | GO:0097526: spliceosomal tri-snRNP complex | 3.03E-03 |
| 38 | GO:0000502: proteasome complex | 3.10E-03 |
| 39 | GO:0005681: spliceosomal complex | 3.84E-03 |
| 40 | GO:0005834: heterotrimeric G-protein complex | 4.17E-03 |
| 41 | GO:0005689: U12-type spliceosomal complex | 4.50E-03 |
| 42 | GO:0016272: prefoldin complex | 4.50E-03 |
| 43 | GO:0005688: U6 snRNP | 6.17E-03 |
| 44 | GO:0071004: U2-type prespliceosome | 6.17E-03 |
| 45 | GO:0046540: U4/U6 x U5 tri-snRNP complex | 7.08E-03 |
| 46 | GO:0005736: DNA-directed RNA polymerase I complex | 8.04E-03 |
| 47 | GO:0005685: U1 snRNP | 8.04E-03 |
| 48 | GO:0008180: COP9 signalosome | 8.04E-03 |
| 49 | GO:0005743: mitochondrial inner membrane | 8.86E-03 |
| 50 | GO:0005666: DNA-directed RNA polymerase III complex | 9.03E-03 |
| 51 | GO:0000418: DNA-directed RNA polymerase IV complex | 1.01E-02 |
| 52 | GO:0005686: U2 snRNP | 1.01E-02 |
| 53 | GO:0048471: perinuclear region of cytoplasm | 1.12E-02 |
| 54 | GO:0005665: DNA-directed RNA polymerase II, core complex | 1.23E-02 |
| 55 | GO:0031307: integral component of mitochondrial outer membrane | 1.23E-02 |
| 56 | GO:0000419: DNA-directed RNA polymerase V complex | 1.71E-02 |
| 57 | GO:0070469: respiratory chain | 1.98E-02 |
| 58 | GO:0005839: proteasome core complex | 2.12E-02 |
| 59 | GO:0005744: mitochondrial inner membrane presequence translocase complex | 2.55E-02 |
| 60 | GO:0016592: mediator complex | 3.67E-02 |
| 61 | GO:0005759: mitochondrial matrix | 4.04E-02 |
| 62 | GO:0000932: P-body | 4.55E-02 |
| 63 | GO:0030529: intracellular ribonucleoprotein complex | 4.55E-02 |