Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT2G31410

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0017126: nucleologenesis0.00E+00
2GO:0006412: translation1.55E-13
3GO:0042254: ribosome biogenesis2.84E-09
4GO:0006364: rRNA processing1.85E-05
5GO:0000494: box C/D snoRNA 3'-end processing2.19E-05
6GO:0000461: endonucleolytic cleavage to generate mature 3'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)2.19E-05
7GO:0000447: endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)2.19E-05
8GO:0043985: histone H4-R3 methylation2.19E-05
9GO:1990258: histone glutamine methylation2.19E-05
10GO:0006407: rRNA export from nucleus2.19E-05
11GO:0042274: ribosomal small subunit biogenesis2.04E-04
12GO:0031167: rRNA methylation2.62E-04
13GO:0001731: formation of translation preinitiation complex3.24E-04
14GO:1900057: positive regulation of leaf senescence4.56E-04
15GO:0000028: ribosomal small subunit assembly5.25E-04
16GO:0022900: electron transport chain5.98E-04
17GO:0001510: RNA methylation5.98E-04
18GO:0030422: production of siRNA involved in RNA interference8.27E-04
19GO:0010162: seed dormancy process8.27E-04
20GO:0006446: regulation of translational initiation1.16E-03
21GO:0010030: positive regulation of seed germination1.25E-03
22GO:0051302: regulation of cell division1.53E-03
23GO:0009561: megagametogenesis1.94E-03
24GO:0008033: tRNA processing2.15E-03
25GO:0010029: regulation of seed germination3.47E-03
26GO:0051707: response to other organism5.60E-03
27GO:0016569: covalent chromatin modification8.43E-03
28GO:0009553: embryo sac development8.61E-03
29GO:0006396: RNA processing8.97E-03
30GO:0009790: embryo development1.15E-02
31GO:0040008: regulation of growth1.25E-02
32GO:0007166: cell surface receptor signaling pathway1.42E-02
33GO:0008152: metabolic process2.90E-02
34GO:0009734: auxin-activated signaling pathway3.46E-02
35GO:0009555: pollen development4.07E-02
RankGO TermAdjusted P value
1GO:0003963: RNA-3'-phosphate cyclase activity0.00E+00
2GO:0003735: structural constituent of ribosome3.53E-16
3GO:0001054: RNA polymerase I activity1.56E-05
4GO:0001056: RNA polymerase III activity1.85E-05
5GO:0004128: cytochrome-b5 reductase activity, acting on NAD(P)H2.19E-05
6GO:1990259: histone-glutamine methyltransferase activity2.19E-05
7GO:0008649: rRNA methyltransferase activity9.94E-05
8GO:0003723: RNA binding2.35E-04
9GO:0102425: myricetin 3-O-glucosyltransferase activity4.56E-04
10GO:0102360: daphnetin 3-O-glucosyltransferase activity4.56E-04
11GO:0030515: snoRNA binding4.56E-04
12GO:0003899: DNA-directed 5'-3' RNA polymerase activity4.67E-04
13GO:0047893: flavonol 3-O-glucosyltransferase activity5.25E-04
14GO:0001055: RNA polymerase II activity7.48E-04
15GO:0004407: histone deacetylase activity1.43E-03
16GO:0035251: UDP-glucosyltransferase activity1.63E-03
17GO:0003746: translation elongation factor activity4.70E-03
18GO:0000987: core promoter proximal region sequence-specific DNA binding4.85E-03
19GO:0080043: quercetin 3-O-glucosyltransferase activity8.25E-03
20GO:0080044: quercetin 7-O-glucosyltransferase activity8.25E-03
21GO:0016758: transferase activity, transferring hexosyl groups1.01E-02
22GO:0019843: rRNA binding1.03E-02
23GO:0008194: UDP-glycosyltransferase activity1.40E-02
24GO:0003743: translation initiation factor activity1.44E-02
25GO:0003729: mRNA binding1.61E-02
26GO:0000166: nucleotide binding4.07E-02
RankGO TermAdjusted P value
1GO:0005730: nucleolus2.64E-13
2GO:0022625: cytosolic large ribosomal subunit1.51E-12
3GO:0005840: ribosome3.89E-11
4GO:0022627: cytosolic small ribosomal subunit1.62E-09
5GO:0022626: cytosolic ribosome9.69E-08
6GO:0005736: DNA-directed RNA polymerase I complex8.46E-06
7GO:0005666: DNA-directed RNA polymerase III complex1.05E-05
8GO:0032040: small-subunit processome1.85E-05
9GO:0030686: 90S preribosome2.19E-05
10GO:0005737: cytoplasm3.25E-05
11GO:0015934: large ribosomal subunit2.46E-04
12GO:0016282: eukaryotic 43S preinitiation complex3.24E-04
13GO:0031428: box C/D snoRNP complex3.24E-04
14GO:0033290: eukaryotic 48S preinitiation complex3.89E-04
15GO:0015030: Cajal body7.48E-04
16GO:0000418: DNA-directed RNA polymerase IV complex8.27E-04
17GO:0005665: DNA-directed RNA polymerase II, core complex9.89E-04
18GO:0031307: integral component of mitochondrial outer membrane9.89E-04
19GO:0000419: DNA-directed RNA polymerase V complex1.34E-03
20GO:0015935: small ribosomal subunit1.63E-03
21GO:0005741: mitochondrial outer membrane1.63E-03
22GO:0016592: mediator complex2.73E-03
23GO:0009506: plasmodesma2.88E-03
24GO:0019005: SCF ubiquitin ligase complex4.00E-03
25GO:0005834: heterotrimeric G-protein complex8.08E-03
26GO:0005773: vacuole1.33E-02
27GO:0080008: Cul4-RING E3 ubiquitin ligase complex1.88E-02
28GO:0043231: intracellular membrane-bounded organelle2.90E-02
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Gene type



Gene DE type