GO Enrichment Analysis of Co-expressed Genes with
AT2G31410
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0017126: nucleologenesis | 0.00E+00 |
| 2 | GO:0006412: translation | 1.55E-13 |
| 3 | GO:0042254: ribosome biogenesis | 2.84E-09 |
| 4 | GO:0006364: rRNA processing | 1.85E-05 |
| 5 | GO:0000494: box C/D snoRNA 3'-end processing | 2.19E-05 |
| 6 | GO:0000461: endonucleolytic cleavage to generate mature 3'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 2.19E-05 |
| 7 | GO:0000447: endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 2.19E-05 |
| 8 | GO:0043985: histone H4-R3 methylation | 2.19E-05 |
| 9 | GO:1990258: histone glutamine methylation | 2.19E-05 |
| 10 | GO:0006407: rRNA export from nucleus | 2.19E-05 |
| 11 | GO:0042274: ribosomal small subunit biogenesis | 2.04E-04 |
| 12 | GO:0031167: rRNA methylation | 2.62E-04 |
| 13 | GO:0001731: formation of translation preinitiation complex | 3.24E-04 |
| 14 | GO:1900057: positive regulation of leaf senescence | 4.56E-04 |
| 15 | GO:0000028: ribosomal small subunit assembly | 5.25E-04 |
| 16 | GO:0022900: electron transport chain | 5.98E-04 |
| 17 | GO:0001510: RNA methylation | 5.98E-04 |
| 18 | GO:0030422: production of siRNA involved in RNA interference | 8.27E-04 |
| 19 | GO:0010162: seed dormancy process | 8.27E-04 |
| 20 | GO:0006446: regulation of translational initiation | 1.16E-03 |
| 21 | GO:0010030: positive regulation of seed germination | 1.25E-03 |
| 22 | GO:0051302: regulation of cell division | 1.53E-03 |
| 23 | GO:0009561: megagametogenesis | 1.94E-03 |
| 24 | GO:0008033: tRNA processing | 2.15E-03 |
| 25 | GO:0010029: regulation of seed germination | 3.47E-03 |
| 26 | GO:0051707: response to other organism | 5.60E-03 |
| 27 | GO:0016569: covalent chromatin modification | 8.43E-03 |
| 28 | GO:0009553: embryo sac development | 8.61E-03 |
| 29 | GO:0006396: RNA processing | 8.97E-03 |
| 30 | GO:0009790: embryo development | 1.15E-02 |
| 31 | GO:0040008: regulation of growth | 1.25E-02 |
| 32 | GO:0007166: cell surface receptor signaling pathway | 1.42E-02 |
| 33 | GO:0008152: metabolic process | 2.90E-02 |
| 34 | GO:0009734: auxin-activated signaling pathway | 3.46E-02 |
| 35 | GO:0009555: pollen development | 4.07E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0003963: RNA-3'-phosphate cyclase activity | 0.00E+00 |
| 2 | GO:0003735: structural constituent of ribosome | 3.53E-16 |
| 3 | GO:0001054: RNA polymerase I activity | 1.56E-05 |
| 4 | GO:0001056: RNA polymerase III activity | 1.85E-05 |
| 5 | GO:0004128: cytochrome-b5 reductase activity, acting on NAD(P)H | 2.19E-05 |
| 6 | GO:1990259: histone-glutamine methyltransferase activity | 2.19E-05 |
| 7 | GO:0008649: rRNA methyltransferase activity | 9.94E-05 |
| 8 | GO:0003723: RNA binding | 2.35E-04 |
| 9 | GO:0102425: myricetin 3-O-glucosyltransferase activity | 4.56E-04 |
| 10 | GO:0102360: daphnetin 3-O-glucosyltransferase activity | 4.56E-04 |
| 11 | GO:0030515: snoRNA binding | 4.56E-04 |
| 12 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 4.67E-04 |
| 13 | GO:0047893: flavonol 3-O-glucosyltransferase activity | 5.25E-04 |
| 14 | GO:0001055: RNA polymerase II activity | 7.48E-04 |
| 15 | GO:0004407: histone deacetylase activity | 1.43E-03 |
| 16 | GO:0035251: UDP-glucosyltransferase activity | 1.63E-03 |
| 17 | GO:0003746: translation elongation factor activity | 4.70E-03 |
| 18 | GO:0000987: core promoter proximal region sequence-specific DNA binding | 4.85E-03 |
| 19 | GO:0080043: quercetin 3-O-glucosyltransferase activity | 8.25E-03 |
| 20 | GO:0080044: quercetin 7-O-glucosyltransferase activity | 8.25E-03 |
| 21 | GO:0016758: transferase activity, transferring hexosyl groups | 1.01E-02 |
| 22 | GO:0019843: rRNA binding | 1.03E-02 |
| 23 | GO:0008194: UDP-glycosyltransferase activity | 1.40E-02 |
| 24 | GO:0003743: translation initiation factor activity | 1.44E-02 |
| 25 | GO:0003729: mRNA binding | 1.61E-02 |
| 26 | GO:0000166: nucleotide binding | 4.07E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0005730: nucleolus | 2.64E-13 |
| 2 | GO:0022625: cytosolic large ribosomal subunit | 1.51E-12 |
| 3 | GO:0005840: ribosome | 3.89E-11 |
| 4 | GO:0022627: cytosolic small ribosomal subunit | 1.62E-09 |
| 5 | GO:0022626: cytosolic ribosome | 9.69E-08 |
| 6 | GO:0005736: DNA-directed RNA polymerase I complex | 8.46E-06 |
| 7 | GO:0005666: DNA-directed RNA polymerase III complex | 1.05E-05 |
| 8 | GO:0032040: small-subunit processome | 1.85E-05 |
| 9 | GO:0030686: 90S preribosome | 2.19E-05 |
| 10 | GO:0005737: cytoplasm | 3.25E-05 |
| 11 | GO:0015934: large ribosomal subunit | 2.46E-04 |
| 12 | GO:0016282: eukaryotic 43S preinitiation complex | 3.24E-04 |
| 13 | GO:0031428: box C/D snoRNP complex | 3.24E-04 |
| 14 | GO:0033290: eukaryotic 48S preinitiation complex | 3.89E-04 |
| 15 | GO:0015030: Cajal body | 7.48E-04 |
| 16 | GO:0000418: DNA-directed RNA polymerase IV complex | 8.27E-04 |
| 17 | GO:0005665: DNA-directed RNA polymerase II, core complex | 9.89E-04 |
| 18 | GO:0031307: integral component of mitochondrial outer membrane | 9.89E-04 |
| 19 | GO:0000419: DNA-directed RNA polymerase V complex | 1.34E-03 |
| 20 | GO:0015935: small ribosomal subunit | 1.63E-03 |
| 21 | GO:0005741: mitochondrial outer membrane | 1.63E-03 |
| 22 | GO:0016592: mediator complex | 2.73E-03 |
| 23 | GO:0009506: plasmodesma | 2.88E-03 |
| 24 | GO:0019005: SCF ubiquitin ligase complex | 4.00E-03 |
| 25 | GO:0005834: heterotrimeric G-protein complex | 8.08E-03 |
| 26 | GO:0005773: vacuole | 1.33E-02 |
| 27 | GO:0080008: Cul4-RING E3 ubiquitin ligase complex | 1.88E-02 |
| 28 | GO:0043231: intracellular membrane-bounded organelle | 2.90E-02 |