Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT2G31380

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0010243: response to organonitrogen compound0.00E+00
2GO:0015843: methylammonium transport0.00E+00
3GO:0019379: sulfate assimilation, phosphoadenylyl sulfate reduction by phosphoadenylyl-sulfate reductase (thioredoxin)0.00E+00
4GO:0071483: cellular response to blue light3.09E-09
5GO:0042754: negative regulation of circadian rhythm1.11E-07
6GO:0007623: circadian rhythm4.31E-07
7GO:0009909: regulation of flower development2.53E-06
8GO:0048574: long-day photoperiodism, flowering1.85E-05
9GO:0006898: receptor-mediated endocytosis1.04E-04
10GO:0043496: regulation of protein homodimerization activity1.04E-04
11GO:0009624: response to nematode1.13E-04
12GO:0016570: histone modification1.78E-04
13GO:0019419: sulfate reduction1.78E-04
14GO:0071230: cellular response to amino acid stimulus1.78E-04
15GO:2001141: regulation of RNA biosynthetic process2.63E-04
16GO:0043433: negative regulation of sequence-specific DNA binding transcription factor activity2.63E-04
17GO:0015696: ammonium transport2.63E-04
18GO:0009416: response to light stimulus2.72E-04
19GO:0010021: amylopectin biosynthetic process3.53E-04
20GO:0072488: ammonium transmembrane transport3.53E-04
21GO:0010600: regulation of auxin biosynthetic process3.53E-04
22GO:0016126: sterol biosynthetic process3.67E-04
23GO:0009658: chloroplast organization4.31E-04
24GO:0009904: chloroplast accumulation movement4.50E-04
25GO:0009903: chloroplast avoidance movement6.58E-04
26GO:0009648: photoperiodism6.58E-04
27GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway7.69E-04
28GO:0006368: transcription elongation from RNA polymerase II promoter7.69E-04
29GO:0070370: cellular heat acclimation7.69E-04
30GO:0010100: negative regulation of photomorphogenesis1.00E-03
31GO:0009970: cellular response to sulfate starvation1.39E-03
32GO:0006995: cellular response to nitrogen starvation1.39E-03
33GO:0000103: sulfate assimilation1.39E-03
34GO:0006355: regulation of transcription, DNA-templated1.45E-03
35GO:0006352: DNA-templated transcription, initiation1.53E-03
36GO:0006816: calcium ion transport1.53E-03
37GO:0009785: blue light signaling pathway1.82E-03
38GO:0007015: actin filament organization1.97E-03
39GO:0010207: photosystem II assembly1.97E-03
40GO:0045893: positive regulation of transcription, DNA-templated2.22E-03
41GO:0006071: glycerol metabolic process2.29E-03
42GO:0019344: cysteine biosynthetic process2.46E-03
43GO:0006874: cellular calcium ion homeostasis2.62E-03
44GO:0009739: response to gibberellin2.71E-03
45GO:0010017: red or far-red light signaling pathway2.97E-03
46GO:0040007: growth3.15E-03
47GO:0010182: sugar mediated signaling pathway3.91E-03
48GO:0009741: response to brassinosteroid3.91E-03
49GO:0042752: regulation of circadian rhythm4.11E-03
50GO:0009723: response to ethylene4.30E-03
51GO:0019252: starch biosynthetic process4.31E-03
52GO:0009851: auxin biosynthetic process4.31E-03
53GO:0009630: gravitropism4.72E-03
54GO:0009567: double fertilization forming a zygote and endosperm5.15E-03
55GO:0045454: cell redox homeostasis5.51E-03
56GO:0045892: negative regulation of transcription, DNA-templated5.60E-03
57GO:0042128: nitrate assimilation6.27E-03
58GO:0015995: chlorophyll biosynthetic process6.50E-03
59GO:0009409: response to cold6.67E-03
60GO:0009751: response to salicylic acid6.69E-03
61GO:0018298: protein-chromophore linkage6.98E-03
62GO:0008219: cell death6.98E-03
63GO:0009753: response to jasmonic acid7.28E-03
64GO:0010218: response to far red light7.47E-03
65GO:0006811: ion transport7.47E-03
66GO:0006865: amino acid transport7.97E-03
67GO:0009637: response to blue light8.23E-03
68GO:0045087: innate immune response8.23E-03
69GO:0006351: transcription, DNA-templated9.36E-03
70GO:0042542: response to hydrogen peroxide9.55E-03
71GO:0010114: response to red light9.82E-03
72GO:0009640: photomorphogenesis9.82E-03
73GO:0042538: hyperosmotic salinity response1.15E-02
74GO:0009737: response to abscisic acid1.19E-02
75GO:0010224: response to UV-B1.24E-02
76GO:0006857: oligopeptide transport1.27E-02
77GO:0006096: glycolytic process1.36E-02
78GO:0042744: hydrogen peroxide catabolic process2.00E-02
79GO:0009651: response to salt stress2.11E-02
80GO:0016036: cellular response to phosphate starvation2.18E-02
81GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process2.48E-02
82GO:0010468: regulation of gene expression2.60E-02
83GO:0009733: response to auxin2.75E-02
84GO:0006810: transport3.60E-02
85GO:0010200: response to chitin3.74E-02
86GO:0046686: response to cadmium ion3.81E-02
87GO:0006281: DNA repair4.81E-02
RankGO TermAdjusted P value
1GO:0004506: squalene monooxygenase activity2.02E-06
2GO:0008066: glutamate receptor activity4.18E-05
3GO:0033741: adenylyl-sulfate reductase (glutathione) activity1.04E-04
4GO:0033201: alpha-1,4-glucan synthase activity1.04E-04
5GO:0015173: aromatic amino acid transmembrane transporter activity1.04E-04
6GO:0009973: adenylyl-sulfate reductase activity1.04E-04
7GO:1990269: RNA polymerase II C-terminal domain phosphoserine binding1.04E-04
8GO:0004604: phosphoadenylyl-sulfate reductase (thioredoxin) activity1.04E-04
9GO:0004096: catalase activity1.78E-04
10GO:0001076: transcription factor activity, RNA polymerase II transcription factor binding1.78E-04
11GO:0004373: glycogen (starch) synthase activity1.78E-04
12GO:0003913: DNA photolyase activity1.78E-04
13GO:0004742: dihydrolipoyllysine-residue acetyltransferase activity2.63E-04
14GO:0015175: neutral amino acid transmembrane transporter activity2.63E-04
15GO:0001053: plastid sigma factor activity3.53E-04
16GO:0016987: sigma factor activity3.53E-04
17GO:0009011: starch synthase activity3.53E-04
18GO:0003700: transcription factor activity, sequence-specific DNA binding3.94E-04
19GO:0008519: ammonium transmembrane transporter activity5.51E-04
20GO:0004709: MAP kinase kinase kinase activity5.51E-04
21GO:0009881: photoreceptor activity7.69E-04
22GO:0030674: protein binding, bridging8.84E-04
23GO:0008889: glycerophosphodiester phosphodiesterase activity1.13E-03
24GO:0000989: transcription factor activity, transcription factor binding1.13E-03
25GO:0019904: protein domain specific binding1.53E-03
26GO:0003677: DNA binding1.78E-03
27GO:0005262: calcium channel activity1.82E-03
28GO:0004970: ionotropic glutamate receptor activity2.13E-03
29GO:0005217: intracellular ligand-gated ion channel activity2.13E-03
30GO:0004527: exonuclease activity3.91E-03
31GO:0010181: FMN binding4.11E-03
32GO:0050660: flavin adenine dinucleotide binding4.30E-03
33GO:0008270: zinc ion binding4.46E-03
34GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor4.93E-03
35GO:0016791: phosphatase activity5.15E-03
36GO:0004721: phosphoprotein phosphatase activity6.50E-03
37GO:0030145: manganese ion binding7.72E-03
38GO:0050897: cobalt ion binding7.72E-03
39GO:0004712: protein serine/threonine/tyrosine kinase activity8.75E-03
40GO:0015293: symporter activity1.07E-02
41GO:0003899: DNA-directed 5'-3' RNA polymerase activity1.21E-02
42GO:0015171: amino acid transmembrane transporter activity1.30E-02
43GO:0005215: transporter activity2.71E-02
44GO:0042802: identical protein binding2.72E-02
45GO:0061630: ubiquitin protein ligase activity3.78E-02
46GO:0004871: signal transducer activity4.29E-02
47GO:0004722: protein serine/threonine phosphatase activity4.43E-02
RankGO TermAdjusted P value
1GO:0045254: pyruvate dehydrogenase complex1.04E-04
2GO:0016593: Cdc73/Paf1 complex3.53E-04
3GO:0009501: amyloplast8.84E-04
4GO:0031982: vesicle8.84E-04
5GO:0009514: glyoxysome1.00E-03
6GO:0005777: peroxisome2.22E-03
7GO:0010319: stromule5.36E-03
8GO:0010287: plastoglobule1.76E-02
9GO:0009543: chloroplast thylakoid lumen1.82E-02
10GO:0005759: mitochondrial matrix2.14E-02
11GO:0031969: chloroplast membrane3.65E-02
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Gene type



Gene DE type