GO Enrichment Analysis of Co-expressed Genes with
AT2G31040
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:1905421: regulation of plant organ morphogenesis | 0.00E+00 |
| 2 | GO:0002184: cytoplasmic translational termination | 0.00E+00 |
| 3 | GO:0030155: regulation of cell adhesion | 0.00E+00 |
| 4 | GO:0019323: pentose catabolic process | 0.00E+00 |
| 5 | GO:0070681: glutaminyl-tRNAGln biosynthesis via transamidation | 0.00E+00 |
| 6 | GO:0006428: isoleucyl-tRNA aminoacylation | 0.00E+00 |
| 7 | GO:0016553: base conversion or substitution editing | 0.00E+00 |
| 8 | GO:0006412: translation | 1.12E-05 |
| 9 | GO:0009735: response to cytokinin | 1.52E-05 |
| 10 | GO:0009817: defense response to fungus, incompatible interaction | 1.55E-05 |
| 11 | GO:0032544: plastid translation | 1.57E-05 |
| 12 | GO:0010206: photosystem II repair | 1.99E-05 |
| 13 | GO:0000023: maltose metabolic process | 3.77E-05 |
| 14 | GO:0000025: maltose catabolic process | 3.77E-05 |
| 15 | GO:0043489: RNA stabilization | 3.77E-05 |
| 16 | GO:0044262: cellular carbohydrate metabolic process | 3.77E-05 |
| 17 | GO:0005976: polysaccharide metabolic process | 9.40E-05 |
| 18 | GO:0048281: inflorescence morphogenesis | 1.63E-04 |
| 19 | GO:0006518: peptide metabolic process | 1.63E-04 |
| 20 | GO:0009409: response to cold | 1.71E-04 |
| 21 | GO:0019252: starch biosynthetic process | 2.06E-04 |
| 22 | GO:0010148: transpiration | 2.40E-04 |
| 23 | GO:0009052: pentose-phosphate shunt, non-oxidative branch | 2.40E-04 |
| 24 | GO:0010731: protein glutathionylation | 2.40E-04 |
| 25 | GO:0006424: glutamyl-tRNA aminoacylation | 2.40E-04 |
| 26 | GO:0010027: thylakoid membrane organization | 3.23E-04 |
| 27 | GO:2000122: negative regulation of stomatal complex development | 3.24E-04 |
| 28 | GO:0010021: amylopectin biosynthetic process | 3.24E-04 |
| 29 | GO:0010037: response to carbon dioxide | 3.24E-04 |
| 30 | GO:0015976: carbon utilization | 3.24E-04 |
| 31 | GO:0009658: chloroplast organization | 3.64E-04 |
| 32 | GO:0042254: ribosome biogenesis | 3.73E-04 |
| 33 | GO:0032543: mitochondrial translation | 4.13E-04 |
| 34 | GO:0006461: protein complex assembly | 4.13E-04 |
| 35 | GO:0000470: maturation of LSU-rRNA | 5.07E-04 |
| 36 | GO:0015979: photosynthesis | 5.66E-04 |
| 37 | GO:0009955: adaxial/abaxial pattern specification | 6.05E-04 |
| 38 | GO:1901259: chloroplast rRNA processing | 6.05E-04 |
| 39 | GO:0042742: defense response to bacterium | 6.63E-04 |
| 40 | GO:0070370: cellular heat acclimation | 7.07E-04 |
| 41 | GO:0010103: stomatal complex morphogenesis | 7.07E-04 |
| 42 | GO:0005978: glycogen biosynthetic process | 8.13E-04 |
| 43 | GO:0009657: plastid organization | 9.23E-04 |
| 44 | GO:0001558: regulation of cell growth | 9.23E-04 |
| 45 | GO:0006783: heme biosynthetic process | 1.04E-03 |
| 46 | GO:0006782: protoporphyrinogen IX biosynthetic process | 1.28E-03 |
| 47 | GO:0009773: photosynthetic electron transport in photosystem I | 1.40E-03 |
| 48 | GO:0005983: starch catabolic process | 1.53E-03 |
| 49 | GO:0010102: lateral root morphogenesis | 1.67E-03 |
| 50 | GO:0010020: chloroplast fission | 1.81E-03 |
| 51 | GO:0009790: embryo development | 1.81E-03 |
| 52 | GO:0000027: ribosomal large subunit assembly | 2.25E-03 |
| 53 | GO:0009944: polarity specification of adaxial/abaxial axis | 2.25E-03 |
| 54 | GO:0006289: nucleotide-excision repair | 2.25E-03 |
| 55 | GO:0051302: regulation of cell division | 2.40E-03 |
| 56 | GO:0006418: tRNA aminoacylation for protein translation | 2.40E-03 |
| 57 | GO:0001944: vasculature development | 2.89E-03 |
| 58 | GO:0009306: protein secretion | 3.05E-03 |
| 59 | GO:0000302: response to reactive oxygen species | 4.13E-03 |
| 60 | GO:0030163: protein catabolic process | 4.51E-03 |
| 61 | GO:0015995: chlorophyll biosynthetic process | 5.94E-03 |
| 62 | GO:0048481: plant ovule development | 6.38E-03 |
| 63 | GO:0008152: metabolic process | 6.56E-03 |
| 64 | GO:0009813: flavonoid biosynthetic process | 6.60E-03 |
| 65 | GO:0046686: response to cadmium ion | 6.74E-03 |
| 66 | GO:0009631: cold acclimation | 7.05E-03 |
| 67 | GO:0010119: regulation of stomatal movement | 7.05E-03 |
| 68 | GO:0045087: innate immune response | 7.51E-03 |
| 69 | GO:0034599: cellular response to oxidative stress | 7.75E-03 |
| 70 | GO:0006631: fatty acid metabolic process | 8.47E-03 |
| 71 | GO:0009965: leaf morphogenesis | 9.73E-03 |
| 72 | GO:0009664: plant-type cell wall organization | 1.05E-02 |
| 73 | GO:0009793: embryo development ending in seed dormancy | 1.11E-02 |
| 74 | GO:0009624: response to nematode | 1.42E-02 |
| 75 | GO:0006396: RNA processing | 1.45E-02 |
| 76 | GO:0006508: proteolysis | 1.60E-02 |
| 77 | GO:0042744: hydrogen peroxide catabolic process | 1.82E-02 |
| 78 | GO:0007623: circadian rhythm | 2.09E-02 |
| 79 | GO:0009451: RNA modification | 2.12E-02 |
| 80 | GO:0006397: mRNA processing | 4.52E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0047538: 2-carboxy-D-arabinitol-1-phosphatase activity | 0.00E+00 |
| 2 | GO:0004822: isoleucine-tRNA ligase activity | 0.00E+00 |
| 3 | GO:0019843: rRNA binding | 2.25E-09 |
| 4 | GO:0003735: structural constituent of ribosome | 4.74E-06 |
| 5 | GO:0004801: sedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glyceronetransferase activity | 3.77E-05 |
| 6 | GO:0050567: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity | 3.77E-05 |
| 7 | GO:0047066: phospholipid-hydroperoxide glutathione peroxidase activity | 3.77E-05 |
| 8 | GO:0004853: uroporphyrinogen decarboxylase activity | 3.77E-05 |
| 9 | GO:0004134: 4-alpha-glucanotransferase activity | 3.77E-05 |
| 10 | GO:0008266: poly(U) RNA binding | 5.65E-05 |
| 11 | GO:0033201: alpha-1,4-glucan synthase activity | 9.40E-05 |
| 12 | GO:0004750: ribulose-phosphate 3-epimerase activity | 9.40E-05 |
| 13 | GO:0010297: heteropolysaccharide binding | 9.40E-05 |
| 14 | GO:0004324: ferredoxin-NADP+ reductase activity | 1.63E-04 |
| 15 | GO:0004373: glycogen (starch) synthase activity | 1.63E-04 |
| 16 | GO:0002161: aminoacyl-tRNA editing activity | 1.63E-04 |
| 17 | GO:0005504: fatty acid binding | 1.63E-04 |
| 18 | GO:0045174: glutathione dehydrogenase (ascorbate) activity | 1.63E-04 |
| 19 | GO:0030267: glyoxylate reductase (NADP) activity | 1.63E-04 |
| 20 | GO:0043023: ribosomal large subunit binding | 2.40E-04 |
| 21 | GO:0019199: transmembrane receptor protein kinase activity | 3.24E-04 |
| 22 | GO:0045430: chalcone isomerase activity | 3.24E-04 |
| 23 | GO:0009011: starch synthase activity | 3.24E-04 |
| 24 | GO:0008878: glucose-1-phosphate adenylyltransferase activity | 3.24E-04 |
| 25 | GO:0042277: peptide binding | 3.24E-04 |
| 26 | GO:0008236: serine-type peptidase activity | 4.00E-04 |
| 27 | GO:0003959: NADPH dehydrogenase activity | 4.13E-04 |
| 28 | GO:0004222: metalloendopeptidase activity | 4.63E-04 |
| 29 | GO:0004130: cytochrome-c peroxidase activity | 5.07E-04 |
| 30 | GO:2001070: starch binding | 5.07E-04 |
| 31 | GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity | 6.05E-04 |
| 32 | GO:0004602: glutathione peroxidase activity | 6.05E-04 |
| 33 | GO:0000049: tRNA binding | 1.53E-03 |
| 34 | GO:0004089: carbonate dehydratase activity | 1.67E-03 |
| 35 | GO:0004252: serine-type endopeptidase activity | 1.72E-03 |
| 36 | GO:0005528: FK506 binding | 2.25E-03 |
| 37 | GO:0004812: aminoacyl-tRNA ligase activity | 3.22E-03 |
| 38 | GO:0050662: coenzyme binding | 3.76E-03 |
| 39 | GO:0008237: metallopeptidase activity | 4.90E-03 |
| 40 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 6.38E-03 |
| 41 | GO:0004364: glutathione transferase activity | 8.71E-03 |
| 42 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 9.99E-03 |
| 43 | GO:0003723: RNA binding | 1.47E-02 |
| 44 | GO:0016491: oxidoreductase activity | 2.83E-02 |
| 45 | GO:0004601: peroxidase activity | 2.85E-02 |
| 46 | GO:0008233: peptidase activity | 3.28E-02 |
| 47 | GO:0042803: protein homodimerization activity | 3.91E-02 |
| 48 | GO:0016787: hydrolase activity | 4.58E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0098572: stromal side of plastid thylakoid membrane | 0.00E+00 |
| 2 | GO:0009507: chloroplast | 1.17E-36 |
| 3 | GO:0009570: chloroplast stroma | 1.26E-33 |
| 4 | GO:0009941: chloroplast envelope | 5.10E-25 |
| 5 | GO:0009535: chloroplast thylakoid membrane | 1.73E-21 |
| 6 | GO:0009579: thylakoid | 2.22E-17 |
| 7 | GO:0009534: chloroplast thylakoid | 1.23E-15 |
| 8 | GO:0009543: chloroplast thylakoid lumen | 2.25E-09 |
| 9 | GO:0031977: thylakoid lumen | 8.93E-09 |
| 10 | GO:0005840: ribosome | 5.51E-07 |
| 11 | GO:0009295: nucleoid | 8.13E-06 |
| 12 | GO:0009533: chloroplast stromal thylakoid | 9.09E-06 |
| 13 | GO:0030956: glutamyl-tRNA(Gln) amidotransferase complex | 3.77E-05 |
| 14 | GO:0009508: plastid chromosome | 4.90E-05 |
| 15 | GO:0030093: chloroplast photosystem I | 9.40E-05 |
| 16 | GO:0010319: stromule | 2.87E-04 |
| 17 | GO:0009501: amyloplast | 8.13E-04 |
| 18 | GO:0042644: chloroplast nucleoid | 1.04E-03 |
| 19 | GO:0005763: mitochondrial small ribosomal subunit | 1.04E-03 |
| 20 | GO:0030095: chloroplast photosystem II | 1.81E-03 |
| 21 | GO:0015935: small ribosomal subunit | 2.56E-03 |
| 22 | GO:0009523: photosystem II | 3.94E-03 |
| 23 | GO:0022625: cytosolic large ribosomal subunit | 4.26E-03 |
| 24 | GO:0030529: intracellular ribonucleoprotein complex | 5.31E-03 |
| 25 | GO:0015934: large ribosomal subunit | 7.05E-03 |
| 26 | GO:0009706: chloroplast inner membrane | 1.42E-02 |
| 27 | GO:0010287: plastoglobule | 1.60E-02 |
| 28 | GO:0016020: membrane | 1.63E-02 |
| 29 | GO:0048046: apoplast | 1.98E-02 |
| 30 | GO:0009536: plastid | 2.64E-02 |
| 31 | GO:0031969: chloroplast membrane | 3.32E-02 |