co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT2G30720

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0046967: cytosol to ER transport	0.00E+00
2	GO:0009268: response to pH	0.00E+00
3	GO:2001143: N-methylnicotinate transport	0.00E+00
4	GO:1900067: regulation of cellular response to alkaline pH	0.00E+00
5	GO:2001142: nicotinate transport	0.00E+00
6	GO:0061416: regulation of transcription from RNA polymerase II promoter in response to salt stress	0.00E+00
7	GO:0009611: response to wounding	1.09E-13
8	GO:0009753: response to jasmonic acid	1.09E-09
9	GO:0042218: 1-aminocyclopropane-1-carboxylate biosynthetic process	4.23E-06
10	GO:1903507: negative regulation of nucleic acid-templated transcription	7.18E-06
11	GO:0009694: jasmonic acid metabolic process	1.84E-05
12	GO:0034440: lipid oxidation	1.84E-05
13	GO:0009695: jasmonic acid biosynthetic process	2.92E-05
14	GO:2000022: regulation of jasmonic acid mediated signaling pathway	3.94E-05
15	GO:0080086: stamen filament development	6.27E-05
16	GO:0048653: anther development	6.62E-05
17	GO:0071669: plant-type cell wall organization or biogenesis	8.40E-05
18	GO:0045010: actin nucleation	1.08E-04
19	GO:0007229: integrin-mediated signaling pathway	1.52E-04
20	GO:0080157: regulation of plant-type cell wall organization or biogenesis	1.52E-04
21	GO:0015784: GDP-mannose transport	1.52E-04
22	GO:1900384: regulation of flavonol biosynthetic process	1.52E-04
23	GO:0010200: response to chitin	1.52E-04
24	GO:0010112: regulation of systemic acquired resistance	1.66E-04
25	GO:0009835: fruit ripening	1.66E-04
26	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	1.89E-04
27	GO:0009651: response to salt stress	2.38E-04
28	GO:0006741: NADP biosynthetic process	3.47E-04
29	GO:0046939: nucleotide phosphorylation	3.47E-04
30	GO:0048480: stigma development	3.47E-04
31	GO:0009901: anther dehiscence	4.57E-04
32	GO:0048513: animal organ development	5.68E-04
33	GO:0015783: GDP-fucose transport	5.68E-04
34	GO:0019674: NAD metabolic process	5.68E-04
35	GO:0010447: response to acidic pH	5.68E-04
36	GO:0031408: oxylipin biosynthetic process	6.79E-04
37	GO:0009414: response to water deprivation	7.13E-04
38	GO:0006468: protein phosphorylation	7.79E-04
39	GO:0040007: growth	8.07E-04
40	GO:0009693: ethylene biosynthetic process	8.07E-04
41	GO:0002679: respiratory burst involved in defense response	8.13E-04
42	GO:0033014: tetrapyrrole biosynthetic process	8.13E-04
43	GO:0048530: fruit morphogenesis	8.13E-04
44	GO:0080024: indolebutyric acid metabolic process	8.13E-04
45	GO:0019363: pyridine nucleotide biosynthetic process	8.13E-04
46	GO:0009399: nitrogen fixation	8.13E-04
47	GO:0009555: pollen development	8.57E-04
48	GO:0000271: polysaccharide biosynthetic process	1.02E-03
49	GO:0045324: late endosome to vacuole transport	1.08E-03
50	GO:0015867: ATP transport	1.08E-03
51	GO:0010107: potassium ion import	1.08E-03
52	GO:0010193: response to ozone	1.34E-03
53	GO:0030041: actin filament polymerization	1.36E-03
54	GO:0045487: gibberellin catabolic process	1.36E-03
55	GO:1900425: negative regulation of defense response to bacterium	1.67E-03
56	GO:0015866: ADP transport	1.67E-03
57	GO:0006777: Mo-molybdopterin cofactor biosynthetic process	1.67E-03
58	GO:0048317: seed morphogenesis	1.67E-03
59	GO:1900057: positive regulation of leaf senescence	2.36E-03
60	GO:0010044: response to aluminum ion	2.36E-03
61	GO:0006955: immune response	2.36E-03
62	GO:0030244: cellulose biosynthetic process	2.49E-03
63	GO:0006355: regulation of transcription, DNA-templated	2.56E-03
64	GO:0009832: plant-type cell wall biogenesis	2.62E-03
65	GO:0009617: response to bacterium	2.69E-03
66	GO:0009850: auxin metabolic process	2.73E-03
67	GO:0009787: regulation of abscisic acid-activated signaling pathway	2.73E-03
68	GO:0009699: phenylpropanoid biosynthetic process	3.12E-03
69	GO:0009932: cell tip growth	3.12E-03
70	GO:0048193: Golgi vesicle transport	3.12E-03
71	GO:0009737: response to abscisic acid	3.31E-03
72	GO:0090333: regulation of stomatal closure	3.53E-03
73	GO:0006783: heme biosynthetic process	3.53E-03
74	GO:0051865: protein autoubiquitination	3.53E-03
75	GO:0006839: mitochondrial transport	3.59E-03
76	GO:0008202: steroid metabolic process	3.96E-03
77	GO:0006779: porphyrin-containing compound biosynthetic process	3.96E-03
78	GO:0009086: methionine biosynthetic process	3.96E-03
79	GO:0006970: response to osmotic stress	4.11E-03
80	GO:0048829: root cap development	4.40E-03
81	GO:0010215: cellulose microfibril organization	4.40E-03
82	GO:0006896: Golgi to vacuole transport	4.40E-03
83	GO:0006782: protoporphyrinogen IX biosynthetic process	4.40E-03
84	GO:0045893: positive regulation of transcription, DNA-templated	4.74E-03
85	GO:0006351: transcription, DNA-templated	4.83E-03
86	GO:0072593: reactive oxygen species metabolic process	4.86E-03
87	GO:0015770: sucrose transport	4.86E-03
88	GO:0031347: regulation of defense response	4.90E-03
89	GO:0009409: response to cold	4.99E-03
90	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	5.13E-03
91	GO:0010152: pollen maturation	5.34E-03
92	GO:0000266: mitochondrial fission	5.34E-03
93	GO:0002213: defense response to insect	5.34E-03
94	GO:0046777: protein autophosphorylation	5.35E-03
95	GO:0055085: transmembrane transport	5.53E-03
96	GO:0006006: glucose metabolic process	5.83E-03
97	GO:0018107: peptidyl-threonine phosphorylation	5.83E-03
98	GO:0055046: microgametogenesis	5.83E-03
99	GO:0034605: cellular response to heat	6.33E-03
100	GO:0019853: L-ascorbic acid biosynthetic process	6.86E-03
101	GO:0090351: seedling development	6.86E-03
102	GO:0046854: phosphatidylinositol phosphorylation	6.86E-03
103	GO:0005985: sucrose metabolic process	6.86E-03
104	GO:0009620: response to fungus	7.09E-03
105	GO:0006952: defense response	7.73E-03
106	GO:0016998: cell wall macromolecule catabolic process	9.10E-03
107	GO:0048278: vesicle docking	9.10E-03
108	GO:0007275: multicellular organism development	9.57E-03
109	GO:0007005: mitochondrion organization	9.69E-03
110	GO:0009686: gibberellin biosynthetic process	1.03E-02
111	GO:0006817: phosphate ion transport	1.09E-02
112	GO:0019722: calcium-mediated signaling	1.09E-02
113	GO:0042742: defense response to bacterium	1.12E-02
114	GO:0010118: stomatal movement	1.22E-02
115	GO:0042631: cellular response to water deprivation	1.22E-02
116	GO:0009958: positive gravitropism	1.29E-02
117	GO:0009960: endosperm development	1.29E-02
118	GO:0071472: cellular response to salt stress	1.29E-02
119	GO:0010154: fruit development	1.29E-02
120	GO:0048544: recognition of pollen	1.36E-02
121	GO:0061025: membrane fusion	1.36E-02
122	GO:0006623: protein targeting to vacuole	1.42E-02
123	GO:0006635: fatty acid beta-oxidation	1.50E-02
124	GO:0002229: defense response to oomycetes	1.50E-02
125	GO:0006470: protein dephosphorylation	1.54E-02
126	GO:0007166: cell surface receptor signaling pathway	1.54E-02
127	GO:0010583: response to cyclopentenone	1.57E-02
128	GO:0009639: response to red or far red light	1.71E-02
129	GO:0019760: glucosinolate metabolic process	1.71E-02
130	GO:0016579: protein deubiquitination	1.86E-02
131	GO:0001666: response to hypoxia	1.94E-02
132	GO:0009607: response to biotic stimulus	2.02E-02
133	GO:0009658: chloroplast organization	2.09E-02
134	GO:0006906: vesicle fusion	2.10E-02
135	GO:0015995: chlorophyll biosynthetic process	2.18E-02
136	GO:0016049: cell growth	2.26E-02
137	GO:0008219: cell death	2.34E-02
138	GO:0048767: root hair elongation	2.43E-02
139	GO:0010311: lateral root formation	2.43E-02
140	GO:0009407: toxin catabolic process	2.51E-02
141	GO:0010119: regulation of stomatal movement	2.60E-02
142	GO:0048527: lateral root development	2.60E-02
143	GO:0009867: jasmonic acid mediated signaling pathway	2.78E-02
144	GO:0045087: innate immune response	2.78E-02
145	GO:0009644: response to high light intensity	3.52E-02
146	GO:0008643: carbohydrate transport	3.52E-02
147	GO:0009636: response to toxic substance	3.61E-02
148	GO:0006855: drug transmembrane transport	3.71E-02
149	GO:0009751: response to salicylic acid	3.76E-02
150	GO:0009408: response to heat	3.81E-02
151	GO:0071555: cell wall organization	4.03E-02
152	GO:0009809: lignin biosynthetic process	4.11E-02
153	GO:0010224: response to UV-B	4.21E-02

Rank	GO Term	Adjusted P value
1	GO:1990206: jasmonyl-Ile conjugate hydrolase activity	0.00E+00
2	GO:0090417: N-methylnicotinate transporter activity	0.00E+00
3	GO:0061798: GTP 3',8'-cyclase activity	0.00E+00
4	GO:0090416: nicotinate transporter activity	0.00E+00
5	GO:0005522: profilin binding	0.00E+00
6	GO:0052694: jasmonoyl-isoleucine-12-hydroxylase activity	0.00E+00
7	GO:0005458: GDP-mannose transmembrane transporter activity	0.00E+00
8	GO:0016165: linoleate 13S-lipoxygenase activity	4.23E-06
9	GO:0003714: transcription corepressor activity	2.47E-05
10	GO:0051753: mannan synthase activity	6.27E-05
11	GO:0016847: 1-aminocyclopropane-1-carboxylate synthase activity	1.08E-04
12	GO:0016301: kinase activity	1.44E-04
13	GO:0047150: betaine-homocysteine S-methyltransferase activity	1.52E-04
14	GO:0042736: NADH kinase activity	1.52E-04
15	GO:0080048: GDP-D-glucose phosphorylase activity	1.52E-04
16	GO:0010475: galactose-1-phosphate guanylyltransferase (GDP) activity	1.52E-04
17	GO:0080047: GDP-L-galactose phosphorylase activity	1.52E-04
18	GO:0008883: glutamyl-tRNA reductase activity	3.47E-04
19	GO:0008898: S-adenosylmethionine-homocysteine S-methyltransferase activity	3.47E-04
20	GO:0046423: allene-oxide cyclase activity	5.68E-04
21	GO:0004383: guanylate cyclase activity	5.68E-04
22	GO:0005457: GDP-fucose transmembrane transporter activity	5.68E-04
23	GO:0004674: protein serine/threonine kinase activity	6.80E-04
24	GO:0016760: cellulose synthase (UDP-forming) activity	8.07E-04
25	GO:0010178: IAA-amino acid conjugate hydrolase activity	8.13E-04
26	GO:0019201: nucleotide kinase activity	8.13E-04
27	GO:0052634: C-19 gibberellin 2-beta-dioxygenase activity	8.13E-04
28	GO:0001653: peptide receptor activity	8.13E-04
29	GO:0042277: peptide binding	1.08E-03
30	GO:0043015: gamma-tubulin binding	1.08E-03
31	GO:0005524: ATP binding	1.19E-03
32	GO:0018685: alkane 1-monooxygenase activity	1.36E-03
33	GO:0004356: glutamate-ammonia ligase activity	1.36E-03
34	GO:0004672: protein kinase activity	1.59E-03
35	GO:0016759: cellulose synthase activity	1.61E-03
36	GO:0080046: quercetin 4'-O-glucosyltransferase activity	1.67E-03
37	GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity	1.71E-03
38	GO:0015144: carbohydrate transmembrane transporter activity	1.80E-03
39	GO:0004017: adenylate kinase activity	2.01E-03
40	GO:0005347: ATP transmembrane transporter activity	2.01E-03
41	GO:0019900: kinase binding	2.01E-03
42	GO:0015217: ADP transmembrane transporter activity	2.01E-03
43	GO:0003950: NAD+ ADP-ribosyltransferase activity	2.01E-03
44	GO:0005351: sugar:proton symporter activity	2.09E-03
45	GO:0043565: sequence-specific DNA binding	2.24E-03
46	GO:0005085: guanyl-nucleotide exchange factor activity	2.36E-03
47	GO:0008506: sucrose:proton symporter activity	2.36E-03
48	GO:0005338: nucleotide-sugar transmembrane transporter activity	2.36E-03
49	GO:0016621: cinnamoyl-CoA reductase activity	2.36E-03
50	GO:0003951: NAD+ kinase activity	3.12E-03
51	GO:0008142: oxysterol binding	3.12E-03
52	GO:0004430: 1-phosphatidylinositol 4-kinase activity	3.12E-03
53	GO:0004712: protein serine/threonine/tyrosine kinase activity	3.44E-03
54	GO:0016207: 4-coumarate-CoA ligase activity	3.53E-03
55	GO:0008515: sucrose transmembrane transporter activity	4.86E-03
56	GO:0042973: glucan endo-1,3-beta-D-glucosidase activity	6.33E-03
57	GO:0003779: actin binding	7.53E-03
58	GO:0003700: transcription factor activity, sequence-specific DNA binding	9.14E-03
59	GO:0022891: substrate-specific transmembrane transporter activity	1.03E-02
60	GO:0030170: pyridoxal phosphate binding	1.08E-02
61	GO:0008514: organic anion transmembrane transporter activity	1.09E-02
62	GO:0050662: coenzyme binding	1.36E-02
63	GO:0008017: microtubule binding	1.41E-02
64	GO:0019901: protein kinase binding	1.42E-02
65	GO:0004843: thiol-dependent ubiquitin-specific protease activity	1.50E-02
66	GO:0051015: actin filament binding	1.64E-02
67	GO:0008237: metallopeptidase activity	1.79E-02
68	GO:0004842: ubiquitin-protein transferase activity	1.82E-02
69	GO:0008375: acetylglucosaminyltransferase activity	2.10E-02
70	GO:0004721: phosphoprotein phosphatase activity	2.18E-02
71	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	2.37E-02
72	GO:0016757: transferase activity, transferring glycosyl groups	2.44E-02
73	GO:0000149: SNARE binding	2.95E-02
74	GO:0050661: NADP binding	3.05E-02
75	GO:0051539: 4 iron, 4 sulfur cluster binding	3.05E-02
76	GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting	3.10E-02
77	GO:0005525: GTP binding	3.12E-02
78	GO:0004364: glutathione transferase activity	3.23E-02
79	GO:0005484: SNAP receptor activity	3.32E-02
80	GO:0004722: protein serine/threonine phosphatase activity	3.39E-02
81	GO:0000981: RNA polymerase II transcription factor activity, sequence-specific DNA binding	3.45E-02
82	GO:0043621: protein self-association	3.52E-02
83	GO:0035091: phosphatidylinositol binding	3.52E-02
84	GO:0015293: symporter activity	3.61E-02
85	GO:0003924: GTPase activity	3.81E-02
86	GO:0044212: transcription regulatory region DNA binding	4.03E-02
87	GO:0016298: lipase activity	4.21E-02

Rank	GO Term	Adjusted P value
1	GO:0005886: plasma membrane	1.89E-05
2	GO:0019008: molybdopterin synthase complex	1.52E-04
3	GO:0005911: cell-cell junction	1.52E-04
4	GO:0090406: pollen tube	4.81E-04
5	GO:0008287: protein serine/threonine phosphatase complex	5.68E-04
6	GO:0009524: phragmoplast	1.53E-03
7	GO:0030140: trans-Golgi network transport vesicle	1.67E-03
8	GO:0030173: integral component of Golgi membrane	2.01E-03
9	GO:0016363: nuclear matrix	2.01E-03
10	GO:0005779: integral component of peroxisomal membrane	3.12E-03
11	GO:0090404: pollen tube tip	4.86E-03
12	GO:0005938: cell cortex	5.83E-03
13	GO:0030136: clathrin-coated vesicle	1.16E-02
14	GO:0005770: late endosome	1.29E-02
15	GO:0009504: cell plate	1.42E-02
16	GO:0016592: mediator complex	1.57E-02
17	GO:0046658: anchored component of plasma membrane	1.78E-02
18	GO:0009707: chloroplast outer membrane	2.34E-02
19	GO:0016021: integral component of membrane	2.57E-02
20	GO:0031225: anchored component of membrane	2.92E-02
21	GO:0005737: cytoplasm	2.99E-02
22	GO:0031902: late endosome membrane	3.14E-02
23	GO:0031201: SNARE complex	3.14E-02
24	GO:0005743: mitochondrial inner membrane	3.55E-02
25	GO:0005794: Golgi apparatus	3.96E-02