co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT2G30700

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0032211: negative regulation of telomere maintenance via telomerase	0.00E+00
2	GO:0030149: sphingolipid catabolic process	0.00E+00
3	GO:1990569: UDP-N-acetylglucosamine transmembrane transport	0.00E+00
4	GO:0015789: UDP-N-acetylgalactosamine transport	0.00E+00
5	GO:1903070: negative regulation of ER-associated ubiquitin-dependent protein catabolic process	0.00E+00
6	GO:1903857: negative regulation of cytokinin dehydrogenase activity	0.00E+00
7	GO:0006412: translation	4.65E-09
8	GO:0042254: ribosome biogenesis	1.72E-05
9	GO:0002237: response to molecule of bacterial origin	2.15E-05
10	GO:0009735: response to cytokinin	3.85E-05
11	GO:0006511: ubiquitin-dependent protein catabolic process	1.16E-04
12	GO:0051603: proteolysis involved in cellular protein catabolic process	1.17E-04
13	GO:0031540: regulation of anthocyanin biosynthetic process	1.43E-04
14	GO:0031060: regulation of histone methylation	1.82E-04
15	GO:0000461: endonucleolytic cleavage to generate mature 3'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)	1.82E-04
16	GO:0000447: endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)	1.82E-04
17	GO:0006407: rRNA export from nucleus	1.82E-04
18	GO:0010265: SCF complex assembly	1.82E-04
19	GO:0048453: sepal formation	1.82E-04
20	GO:0098656: anion transmembrane transport	2.17E-04
21	GO:0009060: aerobic respiration	2.17E-04
22	GO:0031146: SCF-dependent proteasomal ubiquitin-dependent protein catabolic process	2.59E-04
23	GO:0006820: anion transport	4.06E-04
24	GO:0015786: UDP-glucose transport	4.10E-04
25	GO:0019752: carboxylic acid metabolic process	4.10E-04
26	GO:0051788: response to misfolded protein	4.10E-04
27	GO:0006432: phenylalanyl-tRNA aminoacylation	4.10E-04
28	GO:1990069: stomatal opening	4.10E-04
29	GO:0001736: establishment of planar polarity	4.10E-04
30	GO:0009926: auxin polar transport	6.60E-04
31	GO:0042256: mature ribosome assembly	6.69E-04
32	GO:0010338: leaf formation	6.69E-04
33	GO:0009871: jasmonic acid and ethylene-dependent systemic resistance, ethylene mediated signaling pathway	6.69E-04
34	GO:0046168: glycerol-3-phosphate catabolic process	6.69E-04
35	GO:0045793: positive regulation of cell size	6.69E-04
36	GO:0015783: GDP-fucose transport	6.69E-04
37	GO:0000027: ribosomal large subunit assembly	7.17E-04
38	GO:0031348: negative regulation of defense response	9.43E-04
39	GO:0072334: UDP-galactose transmembrane transport	9.55E-04
40	GO:0009647: skotomorphogenesis	9.55E-04
41	GO:0006072: glycerol-3-phosphate metabolic process	9.55E-04
42	GO:0009743: response to carbohydrate	9.55E-04
43	GO:0006168: adenine salvage	9.55E-04
44	GO:0001676: long-chain fatty acid metabolic process	9.55E-04
45	GO:0032877: positive regulation of DNA endoreduplication	9.55E-04
46	GO:0051259: protein oligomerization	9.55E-04
47	GO:0006166: purine ribonucleoside salvage	9.55E-04
48	GO:0048443: stamen development	1.11E-03
49	GO:0006096: glycolytic process	1.18E-03
50	GO:0051781: positive regulation of cell division	1.27E-03
51	GO:0048442: sepal development	1.27E-03
52	GO:0010363: regulation of plant-type hypersensitive response	1.27E-03
53	GO:0006221: pyrimidine nucleotide biosynthetic process	1.27E-03
54	GO:0032366: intracellular sterol transport	1.27E-03
55	GO:0044205: 'de novo' UMP biosynthetic process	1.27E-03
56	GO:0000413: protein peptidyl-prolyl isomerization	1.29E-03
57	GO:0010118: stomatal movement	1.29E-03
58	GO:0010305: leaf vascular tissue pattern formation	1.39E-03
59	GO:0044209: AMP salvage	1.61E-03
60	GO:0019408: dolichol biosynthetic process	1.61E-03
61	GO:0060776: simple leaf morphogenesis	1.61E-03
62	GO:0036065: fucosylation	1.61E-03
63	GO:1902183: regulation of shoot apical meristem development	1.61E-03
64	GO:0045454: cell redox homeostasis	1.72E-03
65	GO:0043248: proteasome assembly	1.98E-03
66	GO:0010358: leaf shaping	1.98E-03
67	GO:0009635: response to herbicide	1.98E-03
68	GO:0006751: glutathione catabolic process	1.98E-03
69	GO:0010286: heat acclimation	2.19E-03
70	GO:0009408: response to heat	2.37E-03
71	GO:1901001: negative regulation of response to salt stress	2.38E-03
72	GO:0009612: response to mechanical stimulus	2.38E-03
73	GO:0009861: jasmonic acid and ethylene-dependent systemic resistance	2.38E-03
74	GO:0009627: systemic acquired resistance	2.74E-03
75	GO:0048528: post-embryonic root development	2.80E-03
76	GO:0071446: cellular response to salicylic acid stimulus	2.80E-03
77	GO:1900056: negative regulation of leaf senescence	2.80E-03
78	GO:0006122: mitochondrial electron transport, ubiquinol to cytochrome c	2.80E-03
79	GO:0009645: response to low light intensity stimulus	2.80E-03
80	GO:0006207: 'de novo' pyrimidine nucleobase biosynthetic process	2.80E-03
81	GO:0046686: response to cadmium ion	2.96E-03
82	GO:0010928: regulation of auxin mediated signaling pathway	3.24E-03
83	GO:0009690: cytokinin metabolic process	3.24E-03
84	GO:0000028: ribosomal small subunit assembly	3.24E-03
85	GO:0048658: anther wall tapetum development	3.24E-03
86	GO:0010119: regulation of stomatal movement	3.70E-03
87	GO:0007389: pattern specification process	3.71E-03
88	GO:0030968: endoplasmic reticulum unfolded protein response	3.71E-03
89	GO:0009245: lipid A biosynthetic process	4.20E-03
90	GO:0009821: alkaloid biosynthetic process	4.20E-03
91	GO:0006098: pentose-phosphate shunt	4.20E-03
92	GO:0080144: amino acid homeostasis	4.20E-03
93	GO:0006754: ATP biosynthetic process	4.20E-03
94	GO:0048589: developmental growth	4.20E-03
95	GO:0015780: nucleotide-sugar transport	4.20E-03
96	GO:0009414: response to water deprivation	4.41E-03
97	GO:0042742: defense response to bacterium	4.59E-03
98	GO:0006631: fatty acid metabolic process	4.80E-03
99	GO:0048441: petal development	5.24E-03
100	GO:0048829: root cap development	5.24E-03
101	GO:0009641: shade avoidance	5.24E-03
102	GO:0008643: carbohydrate transport	5.63E-03
103	GO:0072593: reactive oxygen species metabolic process	5.79E-03
104	GO:0052544: defense response by callose deposition in cell wall	5.79E-03
105	GO:0015770: sucrose transport	5.79E-03
106	GO:0016485: protein processing	5.79E-03
107	GO:0048765: root hair cell differentiation	5.79E-03
108	GO:0008361: regulation of cell size	6.35E-03
109	GO:0015706: nitrate transport	6.35E-03
110	GO:0006626: protein targeting to mitochondrion	6.94E-03
111	GO:0006006: glucose metabolic process	6.94E-03
112	GO:0009725: response to hormone	6.94E-03
113	GO:0006094: gluconeogenesis	6.94E-03
114	GO:0009736: cytokinin-activated signaling pathway	7.02E-03
115	GO:0048440: carpel development	7.55E-03
116	GO:0010020: chloroplast fission	7.55E-03
117	GO:0009933: meristem structural organization	7.55E-03
118	GO:0009909: regulation of flower development	7.77E-03
119	GO:0009969: xyloglucan biosynthetic process	8.18E-03
120	GO:0010167: response to nitrate	8.18E-03
121	GO:0009901: anther dehiscence	8.18E-03
122	GO:0006071: glycerol metabolic process	8.82E-03
123	GO:0009626: plant-type hypersensitive response	8.84E-03
124	GO:0009116: nucleoside metabolic process	9.48E-03
125	GO:0006289: nucleotide-excision repair	9.48E-03
126	GO:0006487: protein N-linked glycosylation	9.48E-03
127	GO:0009751: response to salicylic acid	1.09E-02
128	GO:0015992: proton transport	1.09E-02
129	GO:0051260: protein homooligomerization	1.09E-02
130	GO:0010431: seed maturation	1.09E-02
131	GO:0007005: mitochondrion organization	1.16E-02
132	GO:0080092: regulation of pollen tube growth	1.16E-02
133	GO:0048364: root development	1.17E-02
134	GO:0009753: response to jasmonic acid	1.22E-02
135	GO:0010082: regulation of root meristem growth	1.23E-02
136	GO:0001944: vasculature development	1.23E-02
137	GO:0009625: response to insect	1.23E-02
138	GO:0010584: pollen exine formation	1.31E-02
139	GO:0009651: response to salt stress	1.32E-02
140	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	1.38E-02
141	GO:0015991: ATP hydrolysis coupled proton transport	1.46E-02
142	GO:0080022: primary root development	1.46E-02
143	GO:0010051: xylem and phloem pattern formation	1.46E-02
144	GO:0006520: cellular amino acid metabolic process	1.54E-02
145	GO:0010154: fruit development	1.54E-02
146	GO:0010182: sugar mediated signaling pathway	1.54E-02
147	GO:0015986: ATP synthesis coupled proton transport	1.62E-02
148	GO:0006979: response to oxidative stress	1.66E-02
149	GO:0010183: pollen tube guidance	1.70E-02
150	GO:0048825: cotyledon development	1.70E-02
151	GO:0009749: response to glucose	1.70E-02
152	GO:0009734: auxin-activated signaling pathway	1.72E-02
153	GO:0010150: leaf senescence	1.74E-02
154	GO:0010193: response to ozone	1.79E-02
155	GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process	1.94E-02
156	GO:0030163: protein catabolic process	1.96E-02
157	GO:0071281: cellular response to iron ion	1.96E-02
158	GO:0009793: embryo development ending in seed dormancy	1.96E-02
159	GO:0009617: response to bacterium	2.07E-02
160	GO:0000910: cytokinesis	2.23E-02
161	GO:0009615: response to virus	2.32E-02
162	GO:0010029: regulation of seed germination	2.42E-02
163	GO:0042128: nitrate assimilation	2.51E-02
164	GO:0006974: cellular response to DNA damage stimulus	2.51E-02
165	GO:0009817: defense response to fungus, incompatible interaction	2.81E-02
166	GO:0008219: cell death	2.81E-02
167	GO:0006970: response to osmotic stress	2.89E-02
168	GO:0009860: pollen tube growth	2.89E-02
169	GO:0009832: plant-type cell wall biogenesis	2.91E-02
170	GO:0010218: response to far red light	3.01E-02
171	GO:0009723: response to ethylene	3.11E-02
172	GO:0010043: response to zinc ion	3.11E-02
173	GO:0048366: leaf development	3.16E-02
174	GO:0006457: protein folding	3.17E-02
175	GO:0009867: jasmonic acid mediated signaling pathway	3.32E-02
176	GO:0045087: innate immune response	3.32E-02
177	GO:0051707: response to other organism	3.98E-02
178	GO:0008283: cell proliferation	3.98E-02
179	GO:0009644: response to high light intensity	4.21E-02
180	GO:0009965: leaf morphogenesis	4.32E-02
181	GO:0006855: drug transmembrane transport	4.44E-02
182	GO:0031347: regulation of defense response	4.56E-02
183	GO:0009846: pollen germination	4.68E-02
184	GO:0016042: lipid catabolic process	4.76E-02
185	GO:0006486: protein glycosylation	4.92E-02

Rank	GO Term	Adjusted P value
1	GO:0008117: sphinganine-1-phosphate aldolase activity	0.00E+00
2	GO:0004151: dihydroorotase activity	0.00E+00
3	GO:0008670: 2,4-dienoyl-CoA reductase (NADPH) activity	0.00E+00
4	GO:0005463: UDP-N-acetylgalactosamine transmembrane transporter activity	0.00E+00
5	GO:0017168: 5-oxoprolinase (ATP-hydrolyzing) activity	0.00E+00
6	GO:0003735: structural constituent of ribosome	2.58E-13
7	GO:0004298: threonine-type endopeptidase activity	2.00E-08
8	GO:0003729: mRNA binding	7.93E-07
9	GO:0008233: peptidase activity	2.79E-05
10	GO:0015288: porin activity	1.43E-04
11	GO:0008308: voltage-gated anion channel activity	1.78E-04
12	GO:0000824: inositol tetrakisphosphate 3-kinase activity	1.82E-04
13	GO:0047326: inositol tetrakisphosphate 5-kinase activity	1.82E-04
14	GO:0000823: inositol-1,4,5-trisphosphate 6-kinase activity	1.82E-04
15	GO:0030544: Hsp70 protein binding	1.82E-04
16	GO:0008440: inositol-1,4,5-trisphosphate 3-kinase activity	1.82E-04
17	GO:0003923: GPI-anchor transamidase activity	4.10E-04
18	GO:0004826: phenylalanine-tRNA ligase activity	4.10E-04
19	GO:0008517: folic acid transporter activity	4.10E-04
20	GO:0004618: phosphoglycerate kinase activity	4.10E-04
21	GO:0004557: alpha-galactosidase activity	6.69E-04
22	GO:0004367: glycerol-3-phosphate dehydrogenase [NAD+] activity	6.69E-04
23	GO:0005457: GDP-fucose transmembrane transporter activity	6.69E-04
24	GO:0052692: raffinose alpha-galactosidase activity	6.69E-04
25	GO:0003999: adenine phosphoribosyltransferase activity	9.55E-04
26	GO:0005460: UDP-glucose transmembrane transporter activity	9.55E-04
27	GO:0008097: 5S rRNA binding	9.55E-04
28	GO:0035198: miRNA binding	9.55E-04
29	GO:0004365: glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity	9.55E-04
30	GO:0008514: organic anion transmembrane transporter activity	1.11E-03
31	GO:0010011: auxin binding	1.27E-03
32	GO:0070628: proteasome binding	1.27E-03
33	GO:0004576: oligosaccharyl transferase activity	1.27E-03
34	GO:0005459: UDP-galactose transmembrane transporter activity	1.61E-03
35	GO:0045547: dehydrodolichyl diphosphate synthase activity	1.61E-03
36	GO:0004040: amidase activity	1.61E-03
37	GO:0019843: rRNA binding	1.97E-03
38	GO:0004332: fructose-bisphosphate aldolase activity	1.98E-03
39	GO:0031593: polyubiquitin binding	1.98E-03
40	GO:0031177: phosphopantetheine binding	1.98E-03
41	GO:0051920: peroxiredoxin activity	2.38E-03
42	GO:0102391: decanoate--CoA ligase activity	2.38E-03
43	GO:0000035: acyl binding	2.38E-03
44	GO:0004723: calcium-dependent protein serine/threonine phosphatase activity	2.38E-03
45	GO:0008107: galactoside 2-alpha-L-fucosyltransferase activity	2.80E-03
46	GO:0016831: carboxy-lyase activity	2.80E-03
47	GO:0005338: nucleotide-sugar transmembrane transporter activity	2.80E-03
48	GO:0042162: telomeric DNA binding	2.80E-03
49	GO:0004467: long-chain fatty acid-CoA ligase activity	2.80E-03
50	GO:0016209: antioxidant activity	3.24E-03
51	GO:0000036: ACP phosphopantetheine attachment site binding involved in fatty acid biosynthetic process	3.24E-03
52	GO:0008417: fucosyltransferase activity	4.20E-03
53	GO:0008889: glycerophosphodiester phosphodiesterase activity	4.20E-03
54	GO:0000989: transcription factor activity, transcription factor binding	4.20E-03
55	GO:0008553: hydrogen-exporting ATPase activity, phosphorylative mechanism	4.20E-03
56	GO:0003993: acid phosphatase activity	4.23E-03
57	GO:0016844: strictosidine synthase activity	4.71E-03
58	GO:0015112: nitrate transmembrane transporter activity	4.71E-03
59	GO:0016788: hydrolase activity, acting on ester bonds	5.28E-03
60	GO:0008515: sucrose transmembrane transporter activity	5.79E-03
61	GO:0005089: Rho guanyl-nucleotide exchange factor activity	5.79E-03
62	GO:0008794: arsenate reductase (glutaredoxin) activity	5.79E-03
63	GO:0008559: xenobiotic-transporting ATPase activity	5.79E-03
64	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	6.08E-03
65	GO:0051287: NAD binding	6.31E-03
66	GO:0000049: tRNA binding	6.35E-03
67	GO:0008266: poly(U) RNA binding	7.55E-03
68	GO:0051119: sugar transmembrane transporter activity	8.18E-03
69	GO:0043130: ubiquitin binding	9.48E-03
70	GO:0051536: iron-sulfur cluster binding	9.48E-03
71	GO:0015035: protein disulfide oxidoreductase activity	1.03E-02
72	GO:0005515: protein binding	1.14E-02
73	GO:0009055: electron carrier activity	1.22E-02
74	GO:0046933: proton-transporting ATP synthase activity, rotational mechanism	1.54E-02
75	GO:0030276: clathrin binding	1.54E-02
76	GO:0004872: receptor activity	1.70E-02
77	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	1.96E-02
78	GO:0003684: damaged DNA binding	2.05E-02
79	GO:0009931: calcium-dependent protein serine/threonine kinase activity	2.51E-02
80	GO:0030247: polysaccharide binding	2.61E-02
81	GO:0004683: calmodulin-dependent protein kinase activity	2.61E-02
82	GO:0004601: peroxidase activity	2.69E-02
83	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	2.81E-02
84	GO:0004222: metalloendopeptidase activity	3.01E-02
85	GO:0050897: cobalt ion binding	3.11E-02
86	GO:0003697: single-stranded DNA binding	3.32E-02
87	GO:0050661: NADP binding	3.65E-02
88	GO:0042393: histone binding	3.65E-02
89	GO:0052689: carboxylic ester hydrolase activity	3.68E-02
90	GO:0051537: 2 iron, 2 sulfur cluster binding	4.21E-02
91	GO:0015293: symporter activity	4.32E-02
92	GO:0004722: protein serine/threonine phosphatase activity	4.36E-02

Rank	GO Term	Adjusted P value
1	GO:0022626: cytosolic ribosome	7.88E-12
2	GO:0022625: cytosolic large ribosomal subunit	2.20E-11
3	GO:0000502: proteasome complex	2.68E-10
4	GO:0005773: vacuole	6.63E-10
5	GO:0005829: cytosol	1.50E-09
6	GO:0005840: ribosome	1.28E-08
7	GO:0005839: proteasome core complex	2.00E-08
8	GO:0005774: vacuolar membrane	1.44E-07
9	GO:0005783: endoplasmic reticulum	2.46E-07
10	GO:0005618: cell wall	2.15E-06
11	GO:0015934: large ribosomal subunit	3.24E-05
12	GO:0009506: plasmodesma	4.85E-05
13	GO:0005741: mitochondrial outer membrane	5.04E-05
14	GO:0016020: membrane	9.85E-05
15	GO:0046930: pore complex	1.78E-04
16	GO:0030686: 90S preribosome	1.82E-04
17	GO:0005730: nucleolus	2.83E-04
18	GO:0005886: plasma membrane	3.74E-04
19	GO:0005697: telomerase holoenzyme complex	4.10E-04
20	GO:0046861: glyoxysomal membrane	6.69E-04
21	GO:0030124: AP-4 adaptor complex	6.69E-04
22	GO:0005758: mitochondrial intermembrane space	7.17E-04
23	GO:0022627: cytosolic small ribosomal subunit	7.52E-04
24	GO:0009331: glycerol-3-phosphate dehydrogenase complex	9.55E-04
25	GO:0000275: mitochondrial proton-transporting ATP synthase complex, catalytic core F(1)	1.27E-03
26	GO:0005737: cytoplasm	3.03E-03
27	GO:0009707: chloroplast outer membrane	3.20E-03
28	GO:0030131: clathrin adaptor complex	3.24E-03
29	GO:0009514: glyoxysome	3.71E-03
30	GO:0019773: proteasome core complex, alpha-subunit complex	3.71E-03
31	GO:0031090: organelle membrane	4.20E-03
32	GO:0030125: clathrin vesicle coat	5.24E-03
33	GO:0008541: proteasome regulatory particle, lid subcomplex	5.79E-03
34	GO:0005794: Golgi apparatus	6.82E-03
35	GO:0009508: plastid chromosome	6.94E-03
36	GO:0005750: mitochondrial respiratory chain complex III	7.55E-03
37	GO:0005753: mitochondrial proton-transporting ATP synthase complex	8.18E-03
38	GO:0070469: respiratory chain	1.02E-02
39	GO:0015935: small ribosomal subunit	1.09E-02
40	GO:0005905: clathrin-coated pit	1.09E-02
41	GO:0030136: clathrin-coated vesicle	1.38E-02
42	GO:0005759: mitochondrial matrix	1.58E-02
43	GO:0009507: chloroplast	1.79E-02
44	GO:0032580: Golgi cisterna membrane	2.05E-02
45	GO:0009295: nucleoid	2.14E-02
46	GO:0009536: plastid	2.23E-02
47	GO:0005788: endoplasmic reticulum lumen	2.42E-02
48	GO:0019005: SCF ubiquitin ligase complex	2.81E-02
49	GO:0080008: Cul4-RING E3 ubiquitin ligase complex	2.95E-02
50	GO:0000325: plant-type vacuole	3.11E-02
51	GO:0090406: pollen tube	3.98E-02
52	GO:0031225: anchored component of membrane	3.99E-02
53	GO:0048046: apoplast	4.16E-02
54	GO:0005743: mitochondrial inner membrane	4.56E-02