GO Enrichment Analysis of Co-expressed Genes with
AT2G30570
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0005996: monosaccharide metabolic process | 0.00E+00 |
| 2 | GO:0016118: carotenoid catabolic process | 0.00E+00 |
| 3 | GO:0080114: positive regulation of glycine hydroxymethyltransferase activity | 0.00E+00 |
| 4 | GO:0015717: triose phosphate transport | 0.00E+00 |
| 5 | GO:1903428: positive regulation of reactive oxygen species biosynthetic process | 0.00E+00 |
| 6 | GO:0015979: photosynthesis | 2.58E-33 |
| 7 | GO:0009768: photosynthesis, light harvesting in photosystem I | 4.65E-23 |
| 8 | GO:0018298: protein-chromophore linkage | 6.75E-19 |
| 9 | GO:0009773: photosynthetic electron transport in photosystem I | 1.15E-12 |
| 10 | GO:0009645: response to low light intensity stimulus | 6.45E-12 |
| 11 | GO:0009644: response to high light intensity | 4.64E-10 |
| 12 | GO:0010196: nonphotochemical quenching | 2.22E-09 |
| 13 | GO:0009769: photosynthesis, light harvesting in photosystem II | 2.22E-09 |
| 14 | GO:0006109: regulation of carbohydrate metabolic process | 3.82E-08 |
| 15 | GO:0010218: response to far red light | 2.32E-07 |
| 16 | GO:0009409: response to cold | 2.63E-07 |
| 17 | GO:0010114: response to red light | 6.80E-07 |
| 18 | GO:0030388: fructose 1,6-bisphosphate metabolic process | 7.07E-07 |
| 19 | GO:0010206: photosystem II repair | 1.62E-06 |
| 20 | GO:0006000: fructose metabolic process | 2.67E-06 |
| 21 | GO:0043085: positive regulation of catalytic activity | 3.92E-06 |
| 22 | GO:0006094: gluconeogenesis | 6.33E-06 |
| 23 | GO:0010207: photosystem II assembly | 7.86E-06 |
| 24 | GO:0009637: response to blue light | 1.16E-05 |
| 25 | GO:0006662: glycerol ether metabolic process | 4.34E-05 |
| 26 | GO:0009735: response to cytokinin | 5.79E-05 |
| 27 | GO:0042742: defense response to bacterium | 6.44E-05 |
| 28 | GO:0009416: response to light stimulus | 7.23E-05 |
| 29 | GO:0032544: plastid translation | 9.23E-05 |
| 30 | GO:0006002: fructose 6-phosphate metabolic process | 9.23E-05 |
| 31 | GO:0080093: regulation of photorespiration | 1.18E-04 |
| 32 | GO:0031998: regulation of fatty acid beta-oxidation | 1.18E-04 |
| 33 | GO:0019684: photosynthesis, light reaction | 1.91E-04 |
| 34 | GO:0018119: peptidyl-cysteine S-nitrosylation | 1.91E-04 |
| 35 | GO:0034599: cellular response to oxidative stress | 2.30E-04 |
| 36 | GO:0005986: sucrose biosynthetic process | 2.53E-04 |
| 37 | GO:0035304: regulation of protein dephosphorylation | 2.73E-04 |
| 38 | GO:0016124: xanthophyll catabolic process | 2.73E-04 |
| 39 | GO:0097054: L-glutamate biosynthetic process | 2.73E-04 |
| 40 | GO:0006729: tetrahydrobiopterin biosynthetic process | 2.73E-04 |
| 41 | GO:0016121: carotene catabolic process | 2.73E-04 |
| 42 | GO:0090391: granum assembly | 4.52E-04 |
| 43 | GO:0006518: peptide metabolic process | 4.52E-04 |
| 44 | GO:0035436: triose phosphate transmembrane transport | 4.52E-04 |
| 45 | GO:0009269: response to desiccation | 4.85E-04 |
| 46 | GO:0043086: negative regulation of catalytic activity | 5.56E-04 |
| 47 | GO:0042823: pyridoxal phosphate biosynthetic process | 6.47E-04 |
| 48 | GO:0006537: glutamate biosynthetic process | 6.47E-04 |
| 49 | GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly | 6.47E-04 |
| 50 | GO:0071484: cellular response to light intensity | 6.47E-04 |
| 51 | GO:0045454: cell redox homeostasis | 6.92E-04 |
| 52 | GO:0009765: photosynthesis, light harvesting | 8.60E-04 |
| 53 | GO:0045727: positive regulation of translation | 8.60E-04 |
| 54 | GO:0015994: chlorophyll metabolic process | 8.60E-04 |
| 55 | GO:0010600: regulation of auxin biosynthetic process | 8.60E-04 |
| 56 | GO:0015713: phosphoglycerate transport | 8.60E-04 |
| 57 | GO:0030104: water homeostasis | 8.60E-04 |
| 58 | GO:0006021: inositol biosynthetic process | 8.60E-04 |
| 59 | GO:0010021: amylopectin biosynthetic process | 8.60E-04 |
| 60 | GO:0019676: ammonia assimilation cycle | 8.60E-04 |
| 61 | GO:0015976: carbon utilization | 8.60E-04 |
| 62 | GO:0032543: mitochondrial translation | 1.08E-03 |
| 63 | GO:0010236: plastoquinone biosynthetic process | 1.08E-03 |
| 64 | GO:0006097: glyoxylate cycle | 1.08E-03 |
| 65 | GO:0035434: copper ion transmembrane transport | 1.08E-03 |
| 66 | GO:0009635: response to herbicide | 1.33E-03 |
| 67 | GO:0009643: photosynthetic acclimation | 1.33E-03 |
| 68 | GO:0050665: hydrogen peroxide biosynthetic process | 1.33E-03 |
| 69 | GO:0042549: photosystem II stabilization | 1.33E-03 |
| 70 | GO:0010264: myo-inositol hexakisphosphate biosynthetic process | 1.33E-03 |
| 71 | GO:0010027: thylakoid membrane organization | 1.36E-03 |
| 72 | GO:0010244: response to low fluence blue light stimulus by blue low-fluence system | 1.59E-03 |
| 73 | GO:1901259: chloroplast rRNA processing | 1.59E-03 |
| 74 | GO:0010189: vitamin E biosynthetic process | 1.59E-03 |
| 75 | GO:0009854: oxidative photosynthetic carbon pathway | 1.59E-03 |
| 76 | GO:0009955: adaxial/abaxial pattern specification | 1.59E-03 |
| 77 | GO:0016311: dephosphorylation | 1.68E-03 |
| 78 | GO:0071446: cellular response to salicylic acid stimulus | 1.87E-03 |
| 79 | GO:0010928: regulation of auxin mediated signaling pathway | 2.16E-03 |
| 80 | GO:0009642: response to light intensity | 2.16E-03 |
| 81 | GO:2000031: regulation of salicylic acid mediated signaling pathway | 2.46E-03 |
| 82 | GO:0006098: pentose-phosphate shunt | 2.78E-03 |
| 83 | GO:0090333: regulation of stomatal closure | 2.78E-03 |
| 84 | GO:0010205: photoinhibition | 3.12E-03 |
| 85 | GO:0048829: root cap development | 3.46E-03 |
| 86 | GO:0031627: telomeric loop formation | 3.46E-03 |
| 87 | GO:0009073: aromatic amino acid family biosynthetic process | 3.82E-03 |
| 88 | GO:0000272: polysaccharide catabolic process | 3.82E-03 |
| 89 | GO:0009750: response to fructose | 3.82E-03 |
| 90 | GO:0005983: starch catabolic process | 4.19E-03 |
| 91 | GO:0010628: positive regulation of gene expression | 4.57E-03 |
| 92 | GO:0006108: malate metabolic process | 4.57E-03 |
| 93 | GO:0009767: photosynthetic electron transport chain | 4.57E-03 |
| 94 | GO:0019253: reductive pentose-phosphate cycle | 4.97E-03 |
| 95 | GO:0005985: sucrose metabolic process | 5.37E-03 |
| 96 | GO:0006979: response to oxidative stress | 6.62E-03 |
| 97 | GO:0006825: copper ion transport | 6.66E-03 |
| 98 | GO:0035428: hexose transmembrane transport | 7.57E-03 |
| 99 | GO:0009693: ethylene biosynthetic process | 8.05E-03 |
| 100 | GO:0071215: cellular response to abscisic acid stimulus | 8.05E-03 |
| 101 | GO:0009561: megagametogenesis | 8.53E-03 |
| 102 | GO:0007623: circadian rhythm | 9.43E-03 |
| 103 | GO:0042631: cellular response to water deprivation | 9.53E-03 |
| 104 | GO:0046323: glucose import | 1.00E-02 |
| 105 | GO:0006814: sodium ion transport | 1.06E-02 |
| 106 | GO:0019252: starch biosynthetic process | 1.11E-02 |
| 107 | GO:0008654: phospholipid biosynthetic process | 1.11E-02 |
| 108 | GO:0071554: cell wall organization or biogenesis | 1.16E-02 |
| 109 | GO:0048235: pollen sperm cell differentiation | 1.22E-02 |
| 110 | GO:0051607: defense response to virus | 1.45E-02 |
| 111 | GO:0042254: ribosome biogenesis | 1.49E-02 |
| 112 | GO:0015995: chlorophyll biosynthetic process | 1.70E-02 |
| 113 | GO:0009834: plant-type secondary cell wall biogenesis | 1.96E-02 |
| 114 | GO:0010119: regulation of stomatal movement | 2.02E-02 |
| 115 | GO:0009737: response to abscisic acid | 2.05E-02 |
| 116 | GO:0009853: photorespiration | 2.16E-02 |
| 117 | GO:0006099: tricarboxylic acid cycle | 2.23E-02 |
| 118 | GO:0042542: response to hydrogen peroxide | 2.51E-02 |
| 119 | GO:0009744: response to sucrose | 2.59E-02 |
| 120 | GO:0055114: oxidation-reduction process | 2.70E-02 |
| 121 | GO:0006412: translation | 2.75E-02 |
| 122 | GO:0031347: regulation of defense response | 2.96E-02 |
| 123 | GO:0006364: rRNA processing | 3.20E-02 |
| 124 | GO:0009585: red, far-red light phototransduction | 3.20E-02 |
| 125 | GO:0006096: glycolytic process | 3.60E-02 |
| 126 | GO:0009624: response to nematode | 4.11E-02 |
| 127 | GO:0006810: transport | 4.18E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0030504: inorganic diphosphate transmembrane transporter activity | 0.00E+00 |
| 2 | GO:0016730: oxidoreductase activity, acting on iron-sulfur proteins as donors | 0.00E+00 |
| 3 | GO:0102550: 2-methyl-6-geranylgeranyl-1,4-benzoquinol methyltransferase activity | 0.00E+00 |
| 4 | GO:0046408: chlorophyll synthetase activity | 0.00E+00 |
| 5 | GO:0031409: pigment binding | 1.02E-23 |
| 6 | GO:0016168: chlorophyll binding | 1.21E-21 |
| 7 | GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity | 7.07E-07 |
| 8 | GO:0008047: enzyme activator activity | 2.99E-06 |
| 9 | GO:0008266: poly(U) RNA binding | 7.86E-06 |
| 10 | GO:0004857: enzyme inhibitor activity | 1.39E-05 |
| 11 | GO:0047134: protein-disulfide reductase activity | 3.40E-05 |
| 12 | GO:0004791: thioredoxin-disulfide reductase activity | 4.88E-05 |
| 13 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 7.38E-05 |
| 14 | GO:0046872: metal ion binding | 8.92E-05 |
| 15 | GO:0010242: oxygen evolving activity | 1.18E-04 |
| 16 | GO:0008124: 4-alpha-hydroxytetrahydrobiopterin dehydratase activity | 1.18E-04 |
| 17 | GO:0045157: electron transporter, transferring electrons within the noncyclic electron transport pathway of photosynthesis activity | 1.18E-04 |
| 18 | GO:0016041: glutamate synthase (ferredoxin) activity | 1.18E-04 |
| 19 | GO:0051741: 2-methyl-6-phytyl-1,4-benzoquinone methyltransferase activity | 1.18E-04 |
| 20 | GO:0008886: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (non-phosphorylating) activity | 1.18E-04 |
| 21 | GO:0031072: heat shock protein binding | 2.53E-04 |
| 22 | GO:0004512: inositol-3-phosphate synthase activity | 2.73E-04 |
| 23 | GO:0008967: phosphoglycolate phosphatase activity | 2.73E-04 |
| 24 | GO:0047746: chlorophyllase activity | 2.73E-04 |
| 25 | GO:0010297: heteropolysaccharide binding | 2.73E-04 |
| 26 | GO:0033201: alpha-1,4-glucan synthase activity | 2.73E-04 |
| 27 | GO:0004373: glycogen (starch) synthase activity | 4.52E-04 |
| 28 | GO:0071917: triose-phosphate transmembrane transporter activity | 4.52E-04 |
| 29 | GO:0004324: ferredoxin-NADP+ reductase activity | 4.52E-04 |
| 30 | GO:0052852: very-long-chain-(S)-2-hydroxy-acid oxidase activity | 6.47E-04 |
| 31 | GO:0052853: long-chain-(S)-2-hydroxy-long-chain-acid oxidase activity | 6.47E-04 |
| 32 | GO:0052854: medium-chain-(S)-2-hydroxy-acid oxidase activity | 6.47E-04 |
| 33 | GO:0015035: protein disulfide oxidoreductase activity | 7.28E-04 |
| 34 | GO:0009011: starch synthase activity | 8.60E-04 |
| 35 | GO:0008891: glycolate oxidase activity | 8.60E-04 |
| 36 | GO:0015120: phosphoglycerate transmembrane transporter activity | 8.60E-04 |
| 37 | GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | 8.60E-04 |
| 38 | GO:0019843: rRNA binding | 9.26E-04 |
| 39 | GO:0003959: NADPH dehydrogenase activity | 1.08E-03 |
| 40 | GO:0051538: 3 iron, 4 sulfur cluster binding | 1.08E-03 |
| 41 | GO:0045549: 9-cis-epoxycarotenoid dioxygenase activity | 1.08E-03 |
| 42 | GO:0016615: malate dehydrogenase activity | 1.33E-03 |
| 43 | GO:0004332: fructose-bisphosphate aldolase activity | 1.33E-03 |
| 44 | GO:0005509: calcium ion binding | 1.36E-03 |
| 45 | GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity | 1.59E-03 |
| 46 | GO:0030060: L-malate dehydrogenase activity | 1.59E-03 |
| 47 | GO:0005375: copper ion transmembrane transporter activity | 2.46E-03 |
| 48 | GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity | 3.12E-03 |
| 49 | GO:0003691: double-stranded telomeric DNA binding | 3.82E-03 |
| 50 | GO:0004565: beta-galactosidase activity | 4.57E-03 |
| 51 | GO:0005315: inorganic phosphate transmembrane transporter activity | 4.57E-03 |
| 52 | GO:0004089: carbonate dehydratase activity | 4.57E-03 |
| 53 | GO:0003735: structural constituent of ribosome | 5.25E-03 |
| 54 | GO:0051082: unfolded protein binding | 5.46E-03 |
| 55 | GO:0016787: hydrolase activity | 5.97E-03 |
| 56 | GO:0015144: carbohydrate transmembrane transporter activity | 8.17E-03 |
| 57 | GO:0003756: protein disulfide isomerase activity | 8.53E-03 |
| 58 | GO:0008514: organic anion transmembrane transporter activity | 8.53E-03 |
| 59 | GO:0005351: sugar:proton symporter activity | 9.21E-03 |
| 60 | GO:0010181: FMN binding | 1.06E-02 |
| 61 | GO:0005355: glucose transmembrane transporter activity | 1.06E-02 |
| 62 | GO:0050662: coenzyme binding | 1.06E-02 |
| 63 | GO:0048038: quinone binding | 1.16E-02 |
| 64 | GO:0016413: O-acetyltransferase activity | 1.45E-02 |
| 65 | GO:0008757: S-adenosylmethionine-dependent methyltransferase activity | 1.76E-02 |
| 66 | GO:0004222: metalloendopeptidase activity | 1.96E-02 |
| 67 | GO:0003746: translation elongation factor activity | 2.16E-02 |
| 68 | GO:0003993: acid phosphatase activity | 2.23E-02 |
| 69 | GO:0005515: protein binding | 2.72E-02 |
| 70 | GO:0005198: structural molecule activity | 2.81E-02 |
| 71 | GO:0015293: symporter activity | 2.81E-02 |
| 72 | GO:0003824: catalytic activity | 2.92E-02 |
| 73 | GO:0016491: oxidoreductase activity | 3.66E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009783: photosystem II antenna complex | 0.00E+00 |
| 2 | GO:0005943: phosphatidylinositol 3-kinase complex, class IA | 0.00E+00 |
| 3 | GO:0042579: microbody | 0.00E+00 |
| 4 | GO:0098572: stromal side of plastid thylakoid membrane | 0.00E+00 |
| 5 | GO:0009534: chloroplast thylakoid | 2.18E-68 |
| 6 | GO:0009535: chloroplast thylakoid membrane | 1.13E-55 |
| 7 | GO:0009507: chloroplast | 1.86E-50 |
| 8 | GO:0009579: thylakoid | 2.74E-44 |
| 9 | GO:0009941: chloroplast envelope | 3.20E-39 |
| 10 | GO:0010287: plastoglobule | 7.13E-29 |
| 11 | GO:0009522: photosystem I | 8.44E-26 |
| 12 | GO:0030076: light-harvesting complex | 1.86E-21 |
| 13 | GO:0009570: chloroplast stroma | 7.79E-17 |
| 14 | GO:0009543: chloroplast thylakoid lumen | 1.25E-13 |
| 15 | GO:0030095: chloroplast photosystem II | 4.98E-12 |
| 16 | GO:0031977: thylakoid lumen | 2.53E-10 |
| 17 | GO:0009523: photosystem II | 3.12E-10 |
| 18 | GO:0009654: photosystem II oxygen evolving complex | 2.85E-09 |
| 19 | GO:0042651: thylakoid membrane | 2.85E-09 |
| 20 | GO:0048046: apoplast | 3.98E-09 |
| 21 | GO:0009538: photosystem I reaction center | 4.03E-09 |
| 22 | GO:0019898: extrinsic component of membrane | 2.43E-08 |
| 23 | GO:0009517: PSII associated light-harvesting complex II | 3.82E-08 |
| 24 | GO:0030093: chloroplast photosystem I | 7.07E-07 |
| 25 | GO:0016020: membrane | 1.16E-06 |
| 26 | GO:0016021: integral component of membrane | 3.32E-06 |
| 27 | GO:0009508: plastid chromosome | 6.33E-06 |
| 28 | GO:0009295: nucleoid | 8.89E-05 |
| 29 | GO:0010319: stromule | 8.89E-05 |
| 30 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 1.14E-04 |
| 31 | GO:0009782: photosystem I antenna complex | 1.18E-04 |
| 32 | GO:0009515: granal stacked thylakoid | 1.18E-04 |
| 33 | GO:0000427: plastid-encoded plastid RNA polymerase complex | 2.73E-04 |
| 34 | GO:0015935: small ribosomal subunit | 4.85E-04 |
| 35 | GO:0055035: plastid thylakoid membrane | 1.08E-03 |
| 36 | GO:0005840: ribosome | 1.70E-03 |
| 37 | GO:0009533: chloroplast stromal thylakoid | 1.87E-03 |
| 38 | GO:0009501: amyloplast | 2.16E-03 |
| 39 | GO:0000783: nuclear telomere cap complex | 2.46E-03 |
| 40 | GO:0042644: chloroplast nucleoid | 2.78E-03 |
| 41 | GO:0005763: mitochondrial small ribosomal subunit | 2.78E-03 |
| 42 | GO:0031969: chloroplast membrane | 3.14E-03 |
| 43 | GO:0005777: peroxisome | 1.27E-02 |
| 44 | GO:0009706: chloroplast inner membrane | 4.11E-02 |
| 45 | GO:0005623: cell | 4.91E-02 |