co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT2G29490

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0080169: cellular response to boron-containing substance deprivation	0.00E+00
2	GO:1900067: regulation of cellular response to alkaline pH	0.00E+00
3	GO:0097237: cellular response to toxic substance	0.00E+00
4	GO:0042218: 1-aminocyclopropane-1-carboxylate biosynthetic process	1.55E-07
5	GO:2000022: regulation of jasmonic acid mediated signaling pathway	5.72E-07
6	GO:0009694: jasmonic acid metabolic process	7.42E-07
7	GO:0010112: regulation of systemic acquired resistance	9.14E-06
8	GO:0009835: fruit ripening	9.14E-06
9	GO:1903507: negative regulation of nucleic acid-templated transcription	1.68E-05
10	GO:0009753: response to jasmonic acid	2.76E-05
11	GO:0090351: seedling development	3.12E-05
12	GO:0015865: purine nucleotide transport	5.89E-05
13	GO:0009812: flavonoid metabolic process	5.89E-05
14	GO:0048480: stigma development	5.89E-05
15	GO:0009693: ethylene biosynthetic process	6.26E-05
16	GO:0080024: indolebutyric acid metabolic process	1.55E-04
17	GO:0046836: glycolipid transport	1.55E-04
18	GO:0006571: tyrosine biosynthetic process	1.55E-04
19	GO:0046902: regulation of mitochondrial membrane permeability	1.55E-04
20	GO:0015867: ATP transport	2.12E-04
21	GO:0032957: inositol trisphosphate metabolic process	2.73E-04
22	GO:0015866: ADP transport	3.37E-04
23	GO:0046855: inositol phosphate dephosphorylation	3.37E-04
24	GO:0071669: plant-type cell wall organization or biogenesis	4.74E-04
25	GO:0009850: auxin metabolic process	5.46E-04
26	GO:2000031: regulation of salicylic acid mediated signaling pathway	6.21E-04
27	GO:0009555: pollen development	7.28E-04
28	GO:0009611: response to wounding	7.47E-04
29	GO:0010215: cellulose microfibril organization	8.59E-04
30	GO:0046856: phosphatidylinositol dephosphorylation	9.42E-04
31	GO:0002213: defense response to insect	1.03E-03
32	GO:0016036: cellular response to phosphate starvation	1.09E-03
33	GO:0009901: anther dehiscence	1.30E-03
34	GO:0009414: response to water deprivation	1.69E-03
35	GO:0009723: response to ethylene	2.05E-03
36	GO:0000271: polysaccharide biosynthetic process	2.24E-03
37	GO:0048653: anther development	2.24E-03
38	GO:0010200: response to chitin	2.27E-03
39	GO:0010154: fruit development	2.36E-03
40	GO:0006814: sodium ion transport	2.48E-03
41	GO:0006635: fatty acid beta-oxidation	2.72E-03
42	GO:0009751: response to salicylic acid	3.17E-03
43	GO:0016579: protein deubiquitination	3.35E-03
44	GO:0016049: cell growth	4.03E-03
45	GO:0030244: cellulose biosynthetic process	4.17E-03
46	GO:0006357: regulation of transcription from RNA polymerase II promoter	4.24E-03
47	GO:0009832: plant-type cell wall biogenesis	4.32E-03
48	GO:0048767: root hair elongation	4.32E-03
49	GO:0009813: flavonoid biosynthetic process	4.32E-03
50	GO:0009407: toxin catabolic process	4.46E-03
51	GO:0009737: response to abscisic acid	4.51E-03
52	GO:0009867: jasmonic acid mediated signaling pathway	4.90E-03
53	GO:0006839: mitochondrial transport	5.36E-03
54	GO:0009738: abscisic acid-activated signaling pathway	5.49E-03
55	GO:0009636: response to toxic substance	6.33E-03
56	GO:0031347: regulation of defense response	6.66E-03
57	GO:0006812: cation transport	6.83E-03
58	GO:0009809: lignin biosynthetic process	7.18E-03
59	GO:0006813: potassium ion transport	7.18E-03
60	GO:0055085: transmembrane transport	7.19E-03
61	GO:0009651: response to salt stress	8.03E-03
62	GO:0006355: regulation of transcription, DNA-templated	1.07E-02
63	GO:0009845: seed germination	1.14E-02
64	GO:0071555: cell wall organization	1.15E-02
65	GO:0042742: defense response to bacterium	1.15E-02
66	GO:0030154: cell differentiation	1.25E-02
67	GO:0006351: transcription, DNA-templated	1.35E-02
68	GO:0055114: oxidation-reduction process	1.39E-02
69	GO:0009739: response to gibberellin	1.46E-02
70	GO:0006810: transport	1.69E-02
71	GO:0046686: response to cadmium ion	1.79E-02
72	GO:0080167: response to karrikin	2.14E-02
73	GO:0045892: negative regulation of transcription, DNA-templated	2.46E-02
74	GO:0008152: metabolic process	3.03E-02
75	GO:0009873: ethylene-activated signaling pathway	3.39E-02
76	GO:0009908: flower development	3.96E-02
77	GO:0045893: positive regulation of transcription, DNA-templated	4.69E-02

Rank	GO Term	Adjusted P value
1	GO:1990206: jasmonyl-Ile conjugate hydrolase activity	0.00E+00
2	GO:0052694: jasmonoyl-isoleucine-12-hydroxylase activity	0.00E+00
3	GO:0016847: 1-aminocyclopropane-1-carboxylate synthase activity	5.51E-06
4	GO:0033730: arogenate dehydrogenase (NADP+) activity	2.30E-05
5	GO:0004665: prephenate dehydrogenase (NADP+) activity	2.30E-05
6	GO:0008977: prephenate dehydrogenase (NAD+) activity	2.30E-05
7	GO:0003714: transcription corepressor activity	4.04E-05
8	GO:0015297: antiporter activity	7.76E-05
9	GO:0052659: inositol-1,3,4,5-tetrakisphosphate 5-phosphatase activity	1.04E-04
10	GO:0010178: IAA-amino acid conjugate hydrolase activity	1.55E-04
11	GO:0052658: inositol-1,4,5-trisphosphate 5-phosphatase activity	1.55E-04
12	GO:0017089: glycolipid transporter activity	1.55E-04
13	GO:0004445: inositol-polyphosphate 5-phosphatase activity	1.55E-04
14	GO:0005432: calcium:sodium antiporter activity	1.55E-04
15	GO:0051861: glycolipid binding	2.12E-04
16	GO:0005471: ATP:ADP antiporter activity	2.73E-04
17	GO:0034485: phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity	3.37E-04
18	GO:0051753: mannan synthase activity	4.04E-04
19	GO:0005347: ATP transmembrane transporter activity	4.04E-04
20	GO:0015217: ADP transmembrane transporter activity	4.04E-04
21	GO:0052747: sinapyl alcohol dehydrogenase activity	5.46E-04
22	GO:0015491: cation:cation antiporter activity	5.46E-04
23	GO:0047617: acyl-CoA hydrolase activity	7.77E-04
24	GO:0030170: pyridoxal phosphate binding	9.50E-04
25	GO:0045551: cinnamyl-alcohol dehydrogenase activity	1.03E-03
26	GO:0004439: phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity	1.03E-03
27	GO:0042973: glucan endo-1,3-beta-D-glucosidase activity	1.20E-03
28	GO:0001046: core promoter sequence-specific DNA binding	1.49E-03
29	GO:0016760: cellulose synthase (UDP-forming) activity	1.91E-03
30	GO:0016853: isomerase activity	2.48E-03
31	GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting	2.62E-03
32	GO:0004843: thiol-dependent ubiquitin-specific protease activity	2.72E-03
33	GO:0000981: RNA polymerase II transcription factor activity, sequence-specific DNA binding	2.91E-03
34	GO:0016759: cellulose synthase activity	3.09E-03
35	GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity	3.22E-03
36	GO:0008237: metallopeptidase activity	3.22E-03
37	GO:0051213: dioxygenase activity	3.48E-03
38	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	4.60E-03
39	GO:0004364: glutathione transferase activity	5.68E-03
40	GO:0016758: transferase activity, transferring hexosyl groups	1.05E-02
41	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	1.09E-02
42	GO:0044212: transcription regulatory region DNA binding	1.15E-02
43	GO:0043565: sequence-specific DNA binding	1.37E-02
44	GO:0008194: UDP-glycosyltransferase activity	1.46E-02
45	GO:0042802: identical protein binding	1.60E-02
46	GO:0016788: hydrolase activity, acting on ester bonds	1.86E-02
47	GO:0005515: protein binding	1.94E-02
48	GO:0050660: flavin adenine dinucleotide binding	2.04E-02
49	GO:0042803: protein homodimerization activity	2.52E-02
50	GO:0009055: electron carrier activity	2.97E-02
51	GO:0003700: transcription factor activity, sequence-specific DNA binding	3.69E-02
52	GO:0016757: transferase activity, transferring glycosyl groups	3.92E-02

Rank	GO Term	Adjusted P value
1	GO:0030173: integral component of Golgi membrane	4.04E-04
2	GO:0005779: integral component of peroxisomal membrane	6.21E-04
3	GO:0005740: mitochondrial envelope	8.59E-04
4	GO:0005774: vacuolar membrane	1.64E-03
5	GO:0005743: mitochondrial inner membrane	2.99E-03
6	GO:0005737: cytoplasm	3.65E-03
7	GO:0046658: anchored component of plasma membrane	1.64E-02
8	GO:0005777: peroxisome	4.69E-02