Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT2G29150

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0018293: protein-FAD linkage0.00E+00
2GO:0034553: mitochondrial respiratory chain complex II assembly0.00E+00
3GO:0019379: sulfate assimilation, phosphoadenylyl sulfate reduction by phosphoadenylyl-sulfate reductase (thioredoxin)0.00E+00
4GO:0042362: fat-soluble vitamin biosynthetic process0.00E+00
5GO:0046177: D-gluconate catabolic process0.00E+00
6GO:0006793: phosphorus metabolic process0.00E+00
7GO:0042908: xenobiotic transport0.00E+00
8GO:0009856: pollination0.00E+00
9GO:0055114: oxidation-reduction process2.43E-05
10GO:0006121: mitochondrial electron transport, succinate to ubiquinone3.53E-05
11GO:0010189: vitamin E biosynthetic process4.98E-05
12GO:0051603: proteolysis involved in cellular protein catabolic process5.07E-05
13GO:0050790: regulation of catalytic activity6.70E-05
14GO:0009651: response to salt stress1.28E-04
15GO:0006835: dicarboxylic acid transport1.31E-04
16GO:0000305: response to oxygen radical1.31E-04
17GO:0010597: green leaf volatile biosynthetic process1.31E-04
18GO:0031539: positive regulation of anthocyanin metabolic process1.31E-04
19GO:1902418: (+)-abscisic acid D-glucopyranosyl ester transmembrane transport1.31E-04
20GO:1903409: reactive oxygen species biosynthetic process1.31E-04
21GO:0006148: inosine catabolic process1.31E-04
22GO:0009627: systemic acquired resistance1.54E-04
23GO:0002213: defense response to insect2.58E-04
24GO:0006099: tricarboxylic acid cycle2.82E-04
25GO:0042754: negative regulation of circadian rhythm3.03E-04
26GO:0009915: phloem sucrose loading3.03E-04
27GO:0051592: response to calcium ion3.03E-04
28GO:0080183: response to photooxidative stress3.03E-04
29GO:0043100: pyrimidine nucleobase salvage3.03E-04
30GO:0042753: positive regulation of circadian rhythm4.19E-04
31GO:0019419: sulfate reduction4.99E-04
32GO:1901562: response to paraquat4.99E-04
33GO:0045493: xylan catabolic process4.99E-04
34GO:0010351: lithium ion transport4.99E-04
35GO:0010017: red or far-red light signaling pathway6.13E-04
36GO:0043433: negative regulation of sequence-specific DNA binding transcription factor activity7.14E-04
37GO:0009963: positive regulation of flavonoid biosynthetic process7.14E-04
38GO:0015700: arsenite transport7.14E-04
39GO:0006882: cellular zinc ion homeostasis7.14E-04
40GO:1902476: chloride transmembrane transport7.14E-04
41GO:0042391: regulation of membrane potential8.42E-04
42GO:0080022: primary root development8.42E-04
43GO:0045454: cell redox homeostasis8.70E-04
44GO:0015743: malate transport9.47E-04
45GO:0010600: regulation of auxin biosynthetic process9.47E-04
46GO:0015846: polyamine transport9.47E-04
47GO:0006749: glutathione metabolic process9.47E-04
48GO:0009902: chloroplast relocation9.47E-04
49GO:0009694: jasmonic acid metabolic process9.47E-04
50GO:0006646: phosphatidylethanolamine biosynthetic process9.47E-04
51GO:0006814: sodium ion transport9.69E-04
52GO:0009696: salicylic acid metabolic process1.20E-03
53GO:0010236: plastoquinone biosynthetic process1.20E-03
54GO:0006555: methionine metabolic process1.47E-03
55GO:0003006: developmental process involved in reproduction1.47E-03
56GO:0002238: response to molecule of fungal origin1.47E-03
57GO:0019509: L-methionine salvage from methylthioadenosine1.76E-03
58GO:1901001: negative regulation of response to salt stress1.76E-03
59GO:0006120: mitochondrial electron transport, NADH to ubiquinone1.76E-03
60GO:0009739: response to gibberellin1.92E-03
61GO:0009817: defense response to fungus, incompatible interaction2.05E-03
62GO:0080027: response to herbivore2.06E-03
63GO:0006955: immune response2.06E-03
64GO:0019745: pentacyclic triterpenoid biosynthetic process2.06E-03
65GO:0008272: sulfate transport2.06E-03
66GO:0006821: chloride transport2.06E-03
67GO:0030026: cellular manganese ion homeostasis2.06E-03
68GO:0022904: respiratory electron transport chain2.06E-03
69GO:0007568: aging2.37E-03
70GO:0009787: regulation of abscisic acid-activated signaling pathway2.39E-03
71GO:0048658: anther wall tapetum development2.39E-03
72GO:0010099: regulation of photomorphogenesis2.73E-03
73GO:0015996: chlorophyll catabolic process2.73E-03
74GO:0048574: long-day photoperiodism, flowering2.73E-03
75GO:0046685: response to arsenic-containing substance3.08E-03
76GO:0080144: amino acid homeostasis3.08E-03
77GO:0009060: aerobic respiration3.08E-03
78GO:0051453: regulation of intracellular pH3.46E-03
79GO:0009723: response to ethylene3.49E-03
80GO:0080167: response to karrikin3.81E-03
81GO:0055062: phosphate ion homeostasis3.84E-03
82GO:0000103: sulfate assimilation3.84E-03
83GO:0006855: drug transmembrane transport3.87E-03
84GO:0055085: transmembrane transport4.07E-03
85GO:0044550: secondary metabolite biosynthetic process4.23E-03
86GO:0009684: indoleacetic acid biosynthetic process4.24E-03
87GO:0000272: polysaccharide catabolic process4.24E-03
88GO:0012501: programmed cell death4.65E-03
89GO:0006108: malate metabolic process5.08E-03
90GO:0006006: glucose metabolic process5.08E-03
91GO:0002237: response to molecule of bacterial origin5.52E-03
92GO:0009266: response to temperature stimulus5.52E-03
93GO:0042343: indole glucosinolate metabolic process5.97E-03
94GO:0010039: response to iron ion5.97E-03
95GO:0009740: gibberellic acid mediated signaling pathway5.98E-03
96GO:0009751: response to salicylic acid6.13E-03
97GO:0009624: response to nematode6.35E-03
98GO:0034976: response to endoplasmic reticulum stress6.43E-03
99GO:0006636: unsaturated fatty acid biosynthetic process6.43E-03
100GO:0019344: cysteine biosynthetic process6.91E-03
101GO:0051017: actin filament bundle assembly6.91E-03
102GO:0008299: isoprenoid biosynthetic process7.40E-03
103GO:0006874: cellular calcium ion homeostasis7.40E-03
104GO:0098542: defense response to other organism7.91E-03
105GO:0048511: rhythmic process7.91E-03
106GO:0019748: secondary metabolic process8.42E-03
107GO:0009625: response to insect8.95E-03
108GO:0048653: anther development1.06E-02
109GO:0007623: circadian rhythm1.10E-02
110GO:0009741: response to brassinosteroid1.12E-02
111GO:0009958: positive gravitropism1.12E-02
112GO:0006520: cellular amino acid metabolic process1.12E-02
113GO:0042752: regulation of circadian rhythm1.18E-02
114GO:0008654: phospholipid biosynthetic process1.24E-02
115GO:0055072: iron ion homeostasis1.24E-02
116GO:0009851: auxin biosynthetic process1.24E-02
117GO:0048510: regulation of timing of transition from vegetative to reproductive phase1.30E-02
118GO:0009617: response to bacterium1.31E-02
119GO:0009611: response to wounding1.33E-02
120GO:0006508: proteolysis1.46E-02
121GO:0005975: carbohydrate metabolic process1.55E-02
122GO:0046686: response to cadmium ion1.61E-02
123GO:0009615: response to virus1.68E-02
124GO:0009407: toxin catabolic process2.18E-02
125GO:0006811: ion transport2.18E-02
126GO:0010218: response to far red light2.18E-02
127GO:0009737: response to abscisic acid2.57E-02
128GO:0042542: response to hydrogen peroxide2.80E-02
129GO:0009640: photomorphogenesis2.88E-02
130GO:0010114: response to red light2.88E-02
131GO:0009636: response to toxic substance3.13E-02
132GO:0042742: defense response to bacterium3.14E-02
133GO:0031347: regulation of defense response3.30E-02
134GO:0042538: hyperosmotic salinity response3.39E-02
135GO:0006812: cation transport3.39E-02
136GO:0008152: metabolic process3.44E-02
137GO:0009585: red, far-red light phototransduction3.56E-02
138GO:0006813: potassium ion transport3.56E-02
139GO:0010224: response to UV-B3.65E-02
140GO:0006857: oligopeptide transport3.74E-02
141GO:0006952: defense response3.93E-02
142GO:0006096: glycolytic process4.01E-02
143GO:0048316: seed development4.11E-02
144GO:0009626: plant-type hypersensitive response4.20E-02
145GO:0009620: response to fungus4.29E-02
RankGO TermAdjusted P value
1GO:0050342: tocopherol O-methyltransferase activity0.00E+00
2GO:0102165: (Z)-3-hexen-1-ol acetyltransferase activity0.00E+00
3GO:0000250: lanosterol synthase activity0.00E+00
4GO:0015205: nucleobase transmembrane transporter activity0.00E+00
5GO:0046316: gluconokinase activity0.00E+00
6GO:0047504: (-)-menthol dehydrogenase activity0.00E+00
7GO:0010327: acetyl CoA:(Z)-3-hexen-1-ol acetyltransferase activity0.00E+00
8GO:0017153: sodium:dicarboxylate symporter activity0.00E+00
9GO:0033961: cis-stilbene-oxide hydrolase activity0.00E+00
10GO:0010176: homogentisate phytyltransferase activity0.00E+00
11GO:0047501: (+)-neomenthol dehydrogenase activity0.00E+00
12GO:0004197: cysteine-type endopeptidase activity2.77E-06
13GO:0008106: alcohol dehydrogenase (NADP+) activity7.65E-06
14GO:0080032: methyl jasmonate esterase activity1.44E-05
15GO:0004301: epoxide hydrolase activity1.44E-05
16GO:0008177: succinate dehydrogenase (ubiquinone) activity2.35E-05
17GO:0080030: methyl indole-3-acetate esterase activity3.53E-05
18GO:0005261: cation channel activity4.98E-05
19GO:0008234: cysteine-type peptidase activity5.77E-05
20GO:0016776: phosphotransferase activity, phosphate group as acceptor1.31E-04
21GO:0001530: lipopolysaccharide binding1.31E-04
22GO:0016780: phosphotransferase activity, for other substituted phosphate groups1.31E-04
23GO:0015446: ATPase-coupled arsenite transmembrane transporter activity1.31E-04
24GO:0009671: nitrate:proton symporter activity1.31E-04
25GO:0045437: uridine nucleosidase activity1.31E-04
26GO:0071992: phytochelatin transmembrane transporter activity1.31E-04
27GO:0004307: ethanolaminephosphotransferase activity1.31E-04
28GO:1902417: (+)-abscisic acid D-glucopyranosyl ester transmembrane transporter activity1.31E-04
29GO:0051741: 2-methyl-6-phytyl-1,4-benzoquinone methyltransferase activity1.31E-04
30GO:0016491: oxidoreductase activity2.01E-04
31GO:0033741: adenylyl-sulfate reductase (glutathione) activity3.03E-04
32GO:0047724: inosine nucleosidase activity3.03E-04
33GO:0050347: trans-octaprenyltranstransferase activity3.03E-04
34GO:0052924: all-trans-nonaprenyl-diphosphate synthase (geranylgeranyl-diphosphate specific) activity3.03E-04
35GO:0030572: phosphatidyltransferase activity3.03E-04
36GO:0004142: diacylglycerol cholinephosphotransferase activity3.03E-04
37GO:0009973: adenylyl-sulfate reductase activity3.03E-04
38GO:0004604: phosphoadenylyl-sulfate reductase (thioredoxin) activity3.03E-04
39GO:0051980: iron-nicotianamine transmembrane transporter activity3.03E-04
40GO:0080109: indole-3-acetonitrile nitrile hydratase activity3.03E-04
41GO:0004362: glutathione-disulfide reductase activity3.03E-04
42GO:0004566: beta-glucuronidase activity3.03E-04
43GO:0015179: L-amino acid transmembrane transporter activity3.03E-04
44GO:0004867: serine-type endopeptidase inhibitor activity3.75E-04
45GO:0030553: cGMP binding3.75E-04
46GO:0030552: cAMP binding3.75E-04
47GO:0010309: acireductone dioxygenase [iron(II)-requiring] activity4.99E-04
48GO:0004557: alpha-galactosidase activity4.99E-04
49GO:0080061: indole-3-acetonitrile nitrilase activity4.99E-04
50GO:0052692: raffinose alpha-galactosidase activity4.99E-04
51GO:0005216: ion channel activity5.12E-04
52GO:0008324: cation transmembrane transporter activity5.12E-04
53GO:0000257: nitrilase activity7.14E-04
54GO:0015203: polyamine transmembrane transporter activity7.14E-04
55GO:0080031: methyl salicylate esterase activity7.14E-04
56GO:0004365: glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity7.14E-04
57GO:0030551: cyclic nucleotide binding8.42E-04
58GO:0005249: voltage-gated potassium channel activity8.42E-04
59GO:0015369: calcium:proton antiporter activity9.47E-04
60GO:0009044: xylan 1,4-beta-xylosidase activity9.47E-04
61GO:0016866: intramolecular transferase activity9.47E-04
62GO:0005253: anion channel activity9.47E-04
63GO:0004659: prenyltransferase activity9.47E-04
64GO:0015368: calcium:cation antiporter activity9.47E-04
65GO:0000104: succinate dehydrogenase activity1.20E-03
66GO:0051538: 3 iron, 4 sulfur cluster binding1.20E-03
67GO:0004069: L-aspartate:2-oxoglutarate aminotransferase activity1.47E-03
68GO:0004462: lactoylglutathione lyase activity1.47E-03
69GO:0080130: L-phenylalanine:2-oxoglutarate aminotransferase activity1.47E-03
70GO:0016615: malate dehydrogenase activity1.47E-03
71GO:0004866: endopeptidase inhibitor activity1.47E-03
72GO:0005247: voltage-gated chloride channel activity1.47E-03
73GO:0016161: beta-amylase activity1.76E-03
74GO:0030060: L-malate dehydrogenase activity1.76E-03
75GO:0004723: calcium-dependent protein serine/threonine phosphatase activity1.76E-03
76GO:0015140: malate transmembrane transporter activity2.06E-03
77GO:0004869: cysteine-type endopeptidase inhibitor activity2.39E-03
78GO:0015491: cation:cation antiporter activity2.39E-03
79GO:0008271: secondary active sulfate transmembrane transporter activity2.73E-03
80GO:0050661: NADP binding2.94E-03
81GO:0016788: hydrolase activity, acting on ester bonds2.97E-03
82GO:0015174: basic amino acid transmembrane transporter activity3.46E-03
83GO:0015293: symporter activity3.73E-03
84GO:0008559: xenobiotic-transporting ATPase activity4.24E-03
85GO:0015116: sulfate transmembrane transporter activity4.65E-03
86GO:0015198: oligopeptide transporter activity4.65E-03
87GO:0004022: alcohol dehydrogenase (NAD) activity5.08E-03
88GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen5.27E-03
89GO:0008061: chitin binding5.97E-03
90GO:0009055: electron carrier activity6.82E-03
91GO:0016787: hydrolase activity7.80E-03
92GO:0035251: UDP-glucosyltransferase activity7.91E-03
93GO:0004540: ribonuclease activity7.91E-03
94GO:0005506: iron ion binding8.07E-03
95GO:0022891: substrate-specific transmembrane transporter activity8.95E-03
96GO:0003756: protein disulfide isomerase activity9.49E-03
97GO:0015297: antiporter activity1.05E-02
98GO:0004527: exonuclease activity1.12E-02
99GO:0008137: NADH dehydrogenase (ubiquinone) activity1.30E-02
100GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor1.42E-02
101GO:0020037: heme binding1.64E-02
102GO:0016798: hydrolase activity, acting on glycosyl bonds1.89E-02
103GO:0008236: serine-type peptidase activity1.96E-02
104GO:0005507: copper ion binding2.02E-02
105GO:0019825: oxygen binding2.02E-02
106GO:0015238: drug transmembrane transporter activity2.11E-02
107GO:0005516: calmodulin binding2.17E-02
108GO:0051539: 4 iron, 4 sulfur cluster binding2.64E-02
109GO:0004364: glutathione transferase activity2.80E-02
110GO:0004185: serine-type carboxypeptidase activity2.88E-02
111GO:0051537: 2 iron, 2 sulfur cluster binding3.05E-02
112GO:0051287: NAD binding3.30E-02
113GO:0003690: double-stranded DNA binding3.65E-02
114GO:0016298: lipase activity3.65E-02
115GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups4.11E-02
116GO:0015035: protein disulfide oxidoreductase activity4.67E-02
117GO:0016746: transferase activity, transferring acyl groups4.67E-02
RankGO TermAdjusted P value
1GO:0005764: lysosome1.34E-07
2GO:0005773: vacuole5.39E-06
3GO:0005615: extracellular space2.81E-05
4GO:0005578: proteinaceous extracellular matrix2.95E-04
5GO:0045281: succinate dehydrogenase complex3.03E-04
6GO:0009526: plastid envelope9.47E-04
7GO:0034707: chloride channel complex1.47E-03
8GO:0005887: integral component of plasma membrane1.89E-03
9GO:0048046: apoplast1.99E-03
10GO:0045273: respiratory chain complex II2.39E-03
11GO:0009501: amyloplast2.39E-03
12GO:0005576: extracellular region2.65E-03
13GO:0005829: cytosol2.74E-03
14GO:0009505: plant-type cell wall3.06E-03
15GO:0005765: lysosomal membrane4.24E-03
16GO:0005884: actin filament4.24E-03
17GO:0031012: extracellular matrix5.08E-03
18GO:0005747: mitochondrial respiratory chain complex I5.45E-03
19GO:0005774: vacuolar membrane5.77E-03
20GO:0005886: plasma membrane6.45E-03
21GO:0005758: mitochondrial intermembrane space6.91E-03
22GO:0005759: mitochondrial matrix1.00E-02
23GO:0009705: plant-type vacuole membrane1.10E-02
24GO:0010319: stromule1.55E-02
25GO:0031969: chloroplast membrane2.12E-02
26GO:0000325: plant-type vacuole2.25E-02
27GO:0016020: membrane3.72E-02
28GO:0009536: plastid4.04E-02
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Gene type



Gene DE type