Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT2G28840

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0090627: plant epidermal cell differentiation0.00E+00
2GO:0015812: gamma-aminobutyric acid transport3.90E-05
3GO:0032958: inositol phosphate biosynthetic process3.90E-05
4GO:1902265: abscisic acid homeostasis3.90E-05
5GO:0015709: thiosulfate transport9.72E-05
6GO:0071422: succinate transmembrane transport9.72E-05
7GO:0071712: ER-associated misfolded protein catabolic process9.72E-05
8GO:0048569: post-embryonic animal organ development9.72E-05
9GO:0032527: protein exit from endoplasmic reticulum9.72E-05
10GO:0071367: cellular response to brassinosteroid stimulus1.68E-04
11GO:0032940: secretion by cell1.68E-04
12GO:0006020: inositol metabolic process2.48E-04
13GO:1901000: regulation of response to salt stress2.48E-04
14GO:0015729: oxaloacetate transport2.48E-04
15GO:0030100: regulation of endocytosis2.48E-04
16GO:0010104: regulation of ethylene-activated signaling pathway2.48E-04
17GO:0009687: abscisic acid metabolic process3.33E-04
18GO:0022622: root system development3.33E-04
19GO:1901409: positive regulation of phosphorylation of RNA polymerase II C-terminal domain3.33E-04
20GO:0006461: protein complex assembly4.25E-04
21GO:0071423: malate transmembrane transport4.25E-04
22GO:0006811: ion transport4.83E-04
23GO:0009913: epidermal cell differentiation5.22E-04
24GO:0035435: phosphate ion transmembrane transport5.22E-04
25GO:0045737: positive regulation of cyclin-dependent protein serine/threonine kinase activity6.22E-04
26GO:0009861: jasmonic acid and ethylene-dependent systemic resistance6.22E-04
27GO:0071470: cellular response to osmotic stress6.22E-04
28GO:0032880: regulation of protein localization7.28E-04
29GO:0008272: sulfate transport7.28E-04
30GO:2000070: regulation of response to water deprivation8.37E-04
31GO:0009787: regulation of abscisic acid-activated signaling pathway8.37E-04
32GO:0009819: drought recovery8.37E-04
33GO:0001558: regulation of cell growth9.50E-04
34GO:0006098: pentose-phosphate shunt1.07E-03
35GO:0042761: very long-chain fatty acid biosynthetic process1.19E-03
36GO:2000012: regulation of auxin polar transport1.72E-03
37GO:0010030: positive regulation of seed germination2.01E-03
38GO:0010025: wax biosynthetic process2.16E-03
39GO:0051302: regulation of cell division2.48E-03
40GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process2.49E-03
41GO:0003333: amino acid transmembrane transport2.64E-03
42GO:0051260: protein homooligomerization2.64E-03
43GO:0071369: cellular response to ethylene stimulus2.97E-03
44GO:0071215: cellular response to abscisic acid stimulus2.97E-03
45GO:0008284: positive regulation of cell proliferation3.32E-03
46GO:0009958: positive gravitropism3.69E-03
47GO:0010154: fruit development3.69E-03
48GO:0048825: cotyledon development4.06E-03
49GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway4.37E-03
50GO:0009817: defense response to fungus, incompatible interaction6.58E-03
51GO:0048527: lateral root development7.27E-03
52GO:0006839: mitochondrial transport8.48E-03
53GO:0006631: fatty acid metabolic process8.74E-03
54GO:0009644: response to high light intensity9.77E-03
55GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process1.06E-02
56GO:0006813: potassium ion transport1.14E-02
57GO:0048367: shoot system development1.31E-02
58GO:0042545: cell wall modification1.43E-02
59GO:0051726: regulation of cell cycle1.52E-02
60GO:0016567: protein ubiquitination1.67E-02
61GO:0009845: seed germination1.81E-02
62GO:0009790: embryo development1.91E-02
63GO:0045490: pectin catabolic process2.16E-02
64GO:0006470: protein dephosphorylation2.37E-02
65GO:0009617: response to bacterium2.45E-02
66GO:0045944: positive regulation of transcription from RNA polymerase II promoter2.79E-02
67GO:0007049: cell cycle3.18E-02
68GO:0006810: transport3.30E-02
69GO:0010200: response to chitin3.51E-02
70GO:0045454: cell redox homeostasis3.90E-02
71GO:0016042: lipid catabolic process4.43E-02
72GO:0006355: regulation of transcription, DNA-templated4.58E-02
73GO:0048364: root development4.66E-02
74GO:0008152: metabolic process4.85E-02
RankGO TermAdjusted P value
1GO:0015185: gamma-aminobutyric acid transmembrane transporter activity3.90E-05
2GO:0033857: diphosphoinositol-pentakisphosphate kinase activity3.90E-05
3GO:0000829: inositol heptakisphosphate kinase activity3.90E-05
4GO:0000828: inositol hexakisphosphate kinase activity3.90E-05
5GO:1901677: phosphate transmembrane transporter activity9.72E-05
6GO:0015180: L-alanine transmembrane transporter activity9.72E-05
7GO:0017022: myosin binding9.72E-05
8GO:0044390: ubiquitin-like protein conjugating enzyme binding9.72E-05
9GO:0015117: thiosulfate transmembrane transporter activity9.72E-05
10GO:0005310: dicarboxylic acid transmembrane transporter activity1.68E-04
11GO:0015141: succinate transmembrane transporter activity1.68E-04
12GO:0015131: oxaloacetate transmembrane transporter activity2.48E-04
13GO:0003883: CTP synthase activity2.48E-04
14GO:0015189: L-lysine transmembrane transporter activity2.48E-04
15GO:0015181: arginine transmembrane transporter activity2.48E-04
16GO:1904264: ubiquitin protein ligase activity involved in ERAD pathway3.33E-04
17GO:0005313: L-glutamate transmembrane transporter activity3.33E-04
18GO:0010294: abscisic acid glucosyltransferase activity4.25E-04
19GO:0015140: malate transmembrane transporter activity7.28E-04
20GO:0016209: antioxidant activity8.37E-04
21GO:0015116: sulfate transmembrane transporter activity1.58E-03
22GO:0008083: growth factor activity1.86E-03
23GO:0015297: antiporter activity2.13E-03
24GO:0005249: voltage-gated potassium channel activity3.50E-03
25GO:0016538: cyclin-dependent protein serine/threonine kinase regulator activity3.69E-03
26GO:0061630: ubiquitin protein ligase activity4.45E-03
27GO:0016597: amino acid binding5.26E-03
28GO:0004693: cyclin-dependent protein serine/threonine kinase activity7.04E-03
29GO:0043565: sequence-specific DNA binding8.32E-03
30GO:0015171: amino acid transmembrane transporter activity1.23E-02
31GO:0045330: aspartyl esterase activity1.23E-02
32GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups1.31E-02
33GO:0080043: quercetin 3-O-glucosyltransferase activity1.37E-02
34GO:0080044: quercetin 7-O-glucosyltransferase activity1.37E-02
35GO:0016874: ligase activity1.40E-02
36GO:0030599: pectinesterase activity1.40E-02
37GO:0015144: carbohydrate transmembrane transporter activity1.95E-02
38GO:0005351: sugar:proton symporter activity2.12E-02
39GO:0044212: transcription regulatory region DNA binding2.25E-02
40GO:0008194: UDP-glycosyltransferase activity2.34E-02
41GO:0016788: hydrolase activity, acting on ester bonds2.98E-02
42GO:0008270: zinc ion binding3.23E-02
43GO:0052689: carboxylic ester hydrolase activity3.68E-02
44GO:0042803: protein homodimerization activity4.03E-02
45GO:0004722: protein serine/threonine phosphatase activity4.16E-02
46GO:0003700: transcription factor activity, sequence-specific DNA binding4.72E-02
RankGO TermAdjusted P value
1GO:0030133: transport vesicle9.72E-05
2GO:0036513: Derlin-1 retrotranslocation complex2.48E-04
3GO:0008076: voltage-gated potassium channel complex2.48E-04
4GO:0005798: Golgi-associated vesicle5.22E-04
5GO:0000307: cyclin-dependent protein kinase holoenzyme complex9.50E-04
6GO:0005769: early endosome2.16E-03
7GO:0031966: mitochondrial membrane1.09E-02
8GO:0016020: membrane1.80E-02
9GO:0005615: extracellular space2.34E-02
10GO:0016021: integral component of membrane3.96E-02
11GO:0005743: mitochondrial inner membrane4.30E-02
12GO:0005783: endoplasmic reticulum4.69E-02
13GO:0043231: intracellular membrane-bounded organelle4.85E-02
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Gene type



Gene DE type