co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT2G28680

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0018293: protein-FAD linkage	0.00E+00
2	GO:0034553: mitochondrial respiratory chain complex II assembly	0.00E+00
3	GO:0010336: gibberellic acid homeostasis	0.00E+00
4	GO:0006099: tricarboxylic acid cycle	1.94E-06
5	GO:0006835: dicarboxylic acid transport	6.10E-05
6	GO:0006007: glucose catabolic process	6.10E-05
7	GO:0009852: auxin catabolic process	6.10E-05
8	GO:0006006: glucose metabolic process	9.94E-05
9	GO:0043255: regulation of carbohydrate biosynthetic process	1.48E-04
10	GO:0019388: galactose catabolic process	1.48E-04
11	GO:1902000: homogentisate catabolic process	1.48E-04
12	GO:0019441: tryptophan catabolic process to kynurenine	1.48E-04
13	GO:0043100: pyrimidine nucleobase salvage	1.48E-04
14	GO:0009072: aromatic amino acid family metabolic process	2.51E-04
15	GO:0071492: cellular response to UV-A	2.51E-04
16	GO:0040009: regulation of growth rate	2.51E-04
17	GO:0009590: detection of gravity	3.65E-04
18	GO:0006572: tyrosine catabolic process	3.65E-04
19	GO:0015743: malate transport	4.88E-04
20	GO:0071486: cellular response to high light intensity	4.88E-04
21	GO:0009765: photosynthesis, light harvesting	4.88E-04
22	GO:0006221: pyrimidine nucleotide biosynthetic process	4.88E-04
23	GO:0008295: spermidine biosynthetic process	4.88E-04
24	GO:0032366: intracellular sterol transport	4.88E-04
25	GO:0015846: polyamine transport	4.88E-04
26	GO:0044205: 'de novo' UMP biosynthetic process	4.88E-04
27	GO:0010252: auxin homeostasis	4.99E-04
28	GO:0005975: carbohydrate metabolic process	6.90E-04
29	GO:0009117: nucleotide metabolic process	7.57E-04
30	GO:0006121: mitochondrial electron transport, succinate to ubiquinone	7.57E-04
31	GO:0006751: glutathione catabolic process	7.57E-04
32	GO:0006955: immune response	1.05E-03
33	GO:0006207: 'de novo' pyrimidine nucleobase biosynthetic process	1.05E-03
34	GO:0050790: regulation of catalytic activity	1.05E-03
35	GO:0005978: glycogen biosynthetic process	1.21E-03
36	GO:0009926: auxin polar transport	1.22E-03
37	GO:0051603: proteolysis involved in cellular protein catabolic process	1.68E-03
38	GO:0051453: regulation of intracellular pH	1.73E-03
39	GO:0045036: protein targeting to chloroplast	1.92E-03
40	GO:0052544: defense response by callose deposition in cell wall	2.12E-03
41	GO:0072593: reactive oxygen species metabolic process	2.12E-03
42	GO:0048229: gametophyte development	2.12E-03
43	GO:0006378: mRNA polyadenylation	2.12E-03
44	GO:0006108: malate metabolic process	2.52E-03
45	GO:0050826: response to freezing	2.52E-03
46	GO:0019853: L-ascorbic acid biosynthetic process	2.96E-03
47	GO:0016226: iron-sulfur cluster assembly	4.15E-03
48	GO:0006012: galactose metabolic process	4.40E-03
49	GO:0010118: stomatal movement	5.19E-03
50	GO:0015991: ATP hydrolysis coupled proton transport	5.19E-03
51	GO:0042391: regulation of membrane potential	5.19E-03
52	GO:0080022: primary root development	5.19E-03
53	GO:0006814: sodium ion transport	5.74E-03
54	GO:0019252: starch biosynthetic process	6.03E-03
55	GO:1901657: glycosyl compound metabolic process	6.91E-03
56	GO:0044550: secondary metabolite biosynthetic process	8.18E-03
57	GO:0042128: nitrate assimilation	8.81E-03
58	GO:0006974: cellular response to DNA damage stimulus	8.81E-03
59	GO:0010411: xyloglucan metabolic process	9.14E-03
60	GO:0006508: proteolysis	9.35E-03
61	GO:0008219: cell death	9.82E-03
62	GO:0010311: lateral root formation	1.02E-02
63	GO:0009407: toxin catabolic process	1.05E-02
64	GO:0007568: aging	1.09E-02
65	GO:0009408: response to heat	1.11E-02
66	GO:0006865: amino acid transport	1.12E-02
67	GO:0009853: photorespiration	1.16E-02
68	GO:0009636: response to toxic substance	1.51E-02
69	GO:0009809: lignin biosynthetic process	1.71E-02
70	GO:0006857: oligopeptide transport	1.80E-02
71	GO:0006096: glycolytic process	1.93E-02
72	GO:0009626: plant-type hypersensitive response	2.02E-02
73	GO:0051726: regulation of cell cycle	2.29E-02
74	GO:0055085: transmembrane transport	2.51E-02
75	GO:0010228: vegetative to reproductive phase transition of meristem	3.36E-02
76	GO:0042742: defense response to bacterium	4.00E-02
77	GO:0009826: unidimensional cell growth	4.31E-02
78	GO:0009723: response to ethylene	4.91E-02

Rank	GO Term	Adjusted P value
1	GO:0017168: 5-oxoprolinase (ATP-hydrolyzing) activity	0.00E+00
2	GO:0010474: glucose-1-phosphate guanylyltransferase (GDP) activity	0.00E+00
3	GO:0010473: GDP-galactose:myoinositol-1-phosphate guanylyltransferase activity	0.00E+00
4	GO:0015205: nucleobase transmembrane transporter activity	0.00E+00
5	GO:0004334: fumarylacetoacetase activity	0.00E+00
6	GO:0004151: dihydroorotase activity	0.00E+00
7	GO:0017153: sodium:dicarboxylate symporter activity	0.00E+00
8	GO:0010471: GDP-galactose:mannose-1-phosphate guanylyltransferase activity	0.00E+00
9	GO:0102996: beta,beta digalactosyldiacylglycerol galactosyltransferase activity	0.00E+00
10	GO:0015391: nucleobase:cation symporter activity	0.00E+00
11	GO:0010472: GDP-galactose:glucose-1-phosphate guanylyltransferase activity	0.00E+00
12	GO:0008928: mannose-1-phosphate guanylyltransferase (GDP) activity	0.00E+00
13	GO:0080048: GDP-D-glucose phosphorylase activity	6.10E-05
14	GO:0046480: galactolipid galactosyltransferase activity	6.10E-05
15	GO:0080079: cellobiose glucosidase activity	6.10E-05
16	GO:0010475: galactose-1-phosphate guanylyltransferase (GDP) activity	6.10E-05
17	GO:0080047: GDP-L-galactose phosphorylase activity	6.10E-05
18	GO:0004766: spermidine synthase activity	1.48E-04
19	GO:0046537: 2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity	1.48E-04
20	GO:0004061: arylformamidase activity	1.48E-04
21	GO:0004614: phosphoglucomutase activity	1.48E-04
22	GO:0015179: L-amino acid transmembrane transporter activity	1.48E-04
23	GO:0008234: cysteine-type peptidase activity	1.60E-04
24	GO:0052692: raffinose alpha-galactosidase activity	2.51E-04
25	GO:0010277: chlorophyllide a oxygenase [overall] activity	2.51E-04
26	GO:0004557: alpha-galactosidase activity	2.51E-04
27	GO:0016787: hydrolase activity	2.72E-04
28	GO:0015203: polyamine transmembrane transporter activity	3.65E-04
29	GO:0035529: NADH pyrophosphatase activity	3.65E-04
30	GO:0004197: cysteine-type endopeptidase activity	4.41E-04
31	GO:0050302: indole-3-acetaldehyde oxidase activity	4.88E-04
32	GO:0004301: epoxide hydrolase activity	4.88E-04
33	GO:0008177: succinate dehydrogenase (ubiquinone) activity	6.19E-04
34	GO:0080046: quercetin 4'-O-glucosyltransferase activity	7.57E-04
35	GO:0016615: malate dehydrogenase activity	7.57E-04
36	GO:0030060: L-malate dehydrogenase activity	9.01E-04
37	GO:0005261: cation channel activity	9.01E-04
38	GO:0003730: mRNA 3'-UTR binding	9.01E-04
39	GO:0015140: malate transmembrane transporter activity	1.05E-03
40	GO:0005085: guanyl-nucleotide exchange factor activity	1.05E-03
41	GO:0004034: aldose 1-epimerase activity	1.21E-03
42	GO:0004869: cysteine-type endopeptidase inhibitor activity	1.21E-03
43	GO:0051537: 2 iron, 2 sulfur cluster binding	1.31E-03
44	GO:0008553: hydrogen-exporting ATPase activity, phosphorylative mechanism	1.55E-03
45	GO:0015174: basic amino acid transmembrane transporter activity	1.73E-03
46	GO:0009672: auxin:proton symporter activity	1.73E-03
47	GO:0008047: enzyme activator activity	1.92E-03
48	GO:0046961: proton-transporting ATPase activity, rotational mechanism	2.12E-03
49	GO:0008378: galactosyltransferase activity	2.32E-03
50	GO:0010329: auxin efflux transmembrane transporter activity	2.52E-03
51	GO:0004089: carbonate dehydratase activity	2.52E-03
52	GO:0030552: cAMP binding	2.96E-03
53	GO:0030553: cGMP binding	2.96E-03
54	GO:0005216: ion channel activity	3.65E-03
55	GO:0008324: cation transmembrane transporter activity	3.65E-03
56	GO:0030551: cyclic nucleotide binding	5.19E-03
57	GO:0005249: voltage-gated potassium channel activity	5.19E-03
58	GO:0016853: isomerase activity	5.74E-03
59	GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity	7.52E-03
60	GO:0016413: O-acetyltransferase activity	7.84E-03
61	GO:0051213: dioxygenase activity	8.16E-03
62	GO:0016168: chlorophyll binding	8.48E-03
63	GO:0008236: serine-type peptidase activity	9.47E-03
64	GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	9.73E-03
65	GO:0030145: manganese ion binding	1.09E-02
66	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	1.16E-02
67	GO:0008422: beta-glucosidase activity	1.23E-02
68	GO:0004364: glutathione transferase activity	1.35E-02
69	GO:0015293: symporter activity	1.51E-02
70	GO:0020037: heme binding	1.52E-02
71	GO:0016298: lipase activity	1.76E-02
72	GO:0015171: amino acid transmembrane transporter activity	1.84E-02
73	GO:0045735: nutrient reservoir activity	1.93E-02
74	GO:0022857: transmembrane transporter activity	2.11E-02
75	GO:0015035: protein disulfide oxidoreductase activity	2.25E-02
76	GO:0005507: copper ion binding	2.82E-02
77	GO:0019825: oxygen binding	2.82E-02
78	GO:0015297: antiporter activity	3.14E-02
79	GO:0005506: iron ion binding	3.93E-02
80	GO:0000287: magnesium ion binding	4.37E-02
81	GO:0016788: hydrolase activity, acting on ester bonds	4.49E-02

Rank	GO Term	Adjusted P value
1	GO:0000221: vacuolar proton-transporting V-type ATPase, V1 domain	0.00E+00
2	GO:0097708: intracellular vesicle	0.00E+00
3	GO:0005773: vacuole	1.98E-06
4	GO:0045273: respiratory chain complex II	2.62E-05
5	GO:0005749: mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone)	2.62E-05
6	GO:0005764: lysosome	1.14E-04
7	GO:0005849: mRNA cleavage factor complex	3.65E-04
8	GO:0009526: plastid envelope	4.88E-04
9	GO:0005829: cytosol	9.29E-04
10	GO:0031359: integral component of chloroplast outer membrane	1.05E-03
11	GO:0005774: vacuolar membrane	2.91E-03
12	GO:0045271: respiratory chain complex I	3.65E-03
13	GO:0005615: extracellular space	4.39E-03
14	GO:0009523: photosystem II	6.03E-03
15	GO:0031969: chloroplast membrane	7.51E-03
16	GO:0010319: stromule	7.52E-03
17	GO:0009707: chloroplast outer membrane	9.82E-03
18	GO:0000325: plant-type vacuole	1.09E-02
19	GO:0016020: membrane	1.14E-02
20	GO:0009507: chloroplast	1.32E-02
21	GO:0005887: integral component of plasma membrane	1.51E-02
22	GO:0031966: mitochondrial membrane	1.63E-02
23	GO:0005747: mitochondrial respiratory chain complex I	1.97E-02
24	GO:0009706: chloroplast inner membrane	2.20E-02
25	GO:0005623: cell	2.63E-02
26	GO:0005759: mitochondrial matrix	3.04E-02
27	GO:0005783: endoplasmic reticulum	3.19E-02
28	GO:0048046: apoplast	4.31E-02
29	GO:0016021: integral component of membrane	4.36E-02
30	GO:0005794: Golgi apparatus	4.82E-02
31	GO:0009536: plastid	4.88E-02
32	GO:0009505: plant-type cell wall	4.99E-02