co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT2G27775

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0006884: cell volume homeostasis	0.00E+00
2	GO:0072321: chaperone-mediated protein transport	0.00E+00
3	GO:0071433: cell wall repair	0.00E+00
4	GO:0044843: cell cycle G1/S phase transition	0.00E+00
5	GO:1904874: positive regulation of telomerase RNA localization to Cajal body	0.00E+00
6	GO:0071731: response to nitric oxide	0.00E+00
7	GO:0000466: maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)	0.00E+00
8	GO:0051050: positive regulation of transport	0.00E+00
9	GO:0006364: rRNA processing	5.48E-09
10	GO:0006412: translation	6.15E-08
11	GO:0010162: seed dormancy process	9.44E-07
12	GO:0042273: ribosomal large subunit biogenesis	5.16E-06
13	GO:0042254: ribosome biogenesis	9.17E-06
14	GO:0031120: snRNA pseudouridine synthesis	7.23E-05
15	GO:0031118: rRNA pseudouridine synthesis	7.23E-05
16	GO:0006626: protein targeting to mitochondrion	1.27E-04
17	GO:0045041: protein import into mitochondrial intermembrane space	1.74E-04
18	GO:0000463: maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)	1.74E-04
19	GO:0009944: polarity specification of adaxial/abaxial axis	2.07E-04
20	GO:0007005: mitochondrion organization	2.78E-04
21	GO:0045039: protein import into mitochondrial inner membrane	2.93E-04
22	GO:0009294: DNA mediated transformation	3.04E-04
23	GO:0010197: polar nucleus fusion	4.18E-04
24	GO:0007004: telomere maintenance via telomerase	4.23E-04
25	GO:0009855: determination of bilateral symmetry	4.23E-04
26	GO:0051131: chaperone-mediated protein complex assembly	4.23E-04
27	GO:1900864: mitochondrial RNA modification	5.65E-04
28	GO:0000460: maturation of 5.8S rRNA	5.65E-04
29	GO:0000470: maturation of LSU-rRNA	8.73E-04
30	GO:0016554: cytidine to uridine editing	8.73E-04
31	GO:0000462: maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)	1.04E-03
32	GO:0006458: 'de novo' protein folding	1.04E-03
33	GO:0042026: protein refolding	1.04E-03
34	GO:0080186: developmental vegetative growth	1.21E-03
35	GO:0006821: chloride transport	1.21E-03
36	GO:0001522: pseudouridine synthesis	1.40E-03
37	GO:0001558: regulation of cell growth	1.59E-03
38	GO:0000387: spliceosomal snRNP assembly	2.01E-03
39	GO:1900865: chloroplast RNA modification	2.01E-03
40	GO:0030422: production of siRNA involved in RNA interference	2.23E-03
41	GO:0016569: covalent chromatin modification	2.70E-03
42	GO:0009553: embryo sac development	2.78E-03
43	GO:0000027: ribosomal large subunit assembly	3.98E-03
44	GO:0009735: response to cytokinin	4.14E-03
45	GO:0051302: regulation of cell division	4.26E-03
46	GO:0061077: chaperone-mediated protein folding	4.54E-03
47	GO:0046686: response to cadmium ion	4.72E-03
48	GO:0009451: RNA modification	5.02E-03
49	GO:0000413: protein peptidyl-prolyl isomerization	6.05E-03
50	GO:0009960: endosperm development	6.38E-03
51	GO:0006457: protein folding	6.43E-03
52	GO:0080156: mitochondrial mRNA modification	7.38E-03
53	GO:0016049: cell growth	1.11E-02
54	GO:0048527: lateral root development	1.27E-02
55	GO:0048364: root development	1.45E-02
56	GO:0000154: rRNA modification	1.77E-02
57	GO:0006414: translational elongation	3.69E-02

Rank	GO Term	Adjusted P value
1	GO:0050355: triphosphatase activity	0.00E+00
2	GO:0016018: cyclosporin A binding	0.00E+00
3	GO:0034513: box H/ACA snoRNA binding	0.00E+00
4	GO:0003735: structural constituent of ribosome	1.71E-11
5	GO:0003723: RNA binding	4.75E-11
6	GO:0030515: snoRNA binding	1.54E-07
7	GO:0004407: histone deacetylase activity	4.61E-06
8	GO:0042134: rRNA primary transcript binding	7.23E-05
9	GO:0050897: cobalt ion binding	7.44E-05
10	GO:0044183: protein binding involved in protein folding	9.43E-05
11	GO:0000166: nucleotide binding	1.28E-04
12	GO:0043021: ribonucleoprotein complex binding	1.74E-04
13	GO:0070034: telomerase RNA binding	1.74E-04
14	GO:0070181: small ribosomal subunit rRNA binding	2.93E-04
15	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	9.46E-04
16	GO:0003746: translation elongation factor activity	1.18E-03
17	GO:0008235: metalloexopeptidase activity	1.21E-03
18	GO:0001055: RNA polymerase II activity	2.01E-03
19	GO:0001054: RNA polymerase I activity	2.46E-03
20	GO:0001056: RNA polymerase III activity	2.70E-03
21	GO:0000049: tRNA binding	2.70E-03
22	GO:0051082: unfolded protein binding	2.86E-03
23	GO:0008026: ATP-dependent helicase activity	3.03E-03
24	GO:0019843: rRNA binding	3.57E-03
25	GO:0005216: ion channel activity	4.26E-03
26	GO:0016787: hydrolase activity	7.65E-03
27	GO:0003924: GTPase activity	1.39E-02
28	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	1.81E-02
29	GO:0003729: mRNA binding	1.88E-02
30	GO:0003899: DNA-directed 5'-3' RNA polymerase activity	2.01E-02
31	GO:0016887: ATPase activity	2.16E-02
32	GO:0008270: zinc ion binding	2.16E-02
33	GO:0008565: protein transporter activity	3.44E-02
34	GO:0005507: copper ion binding	3.52E-02

Rank	GO Term	Adjusted P value
1	GO:0034457: Mpp10 complex	0.00E+00
2	GO:0034709: methylosome	0.00E+00
3	GO:0090661: box H/ACA telomerase RNP complex	0.00E+00
4	GO:0042719: mitochondrial intermembrane space protein transporter complex	0.00E+00
5	GO:0072589: box H/ACA scaRNP complex	0.00E+00
6	GO:0005730: nucleolus	5.05E-25
7	GO:0032040: small-subunit processome	1.15E-08
8	GO:0005840: ribosome	5.52E-08
9	GO:0022627: cytosolic small ribosomal subunit	2.37E-07
10	GO:0022626: cytosolic ribosome	7.27E-07
11	GO:0030687: preribosome, large subunit precursor	2.60E-05
12	GO:0015030: Cajal body	6.65E-05
13	GO:0080008: Cul4-RING E3 ubiquitin ligase complex	1.48E-04
14	GO:0070545: PeBoW complex	1.74E-04
15	GO:0022625: cytosolic large ribosomal subunit	2.00E-04
16	GO:0005758: mitochondrial intermembrane space	2.07E-04
17	GO:0005747: mitochondrial respiratory chain complex I	2.49E-04
18	GO:0005834: heterotrimeric G-protein complex	2.60E-04
19	GO:0005774: vacuolar membrane	2.84E-04
20	GO:0034715: pICln-Sm protein complex	2.93E-04
21	GO:0031429: box H/ACA snoRNP complex	4.23E-04
22	GO:0005759: mitochondrial matrix	5.47E-04
23	GO:0005634: nucleus	6.21E-04
24	GO:0031428: box C/D snoRNP complex	8.73E-04
25	GO:0016363: nuclear matrix	1.04E-03
26	GO:0015934: large ribosomal subunit	1.08E-03
27	GO:0034399: nuclear periphery	1.40E-03
28	GO:0005618: cell wall	1.49E-03
29	GO:0005736: DNA-directed RNA polymerase I complex	1.80E-03
30	GO:0005739: mitochondrion	1.82E-03
31	GO:0005829: cytosol	1.96E-03
32	GO:0005666: DNA-directed RNA polymerase III complex	2.01E-03
33	GO:0000418: DNA-directed RNA polymerase IV complex	2.23E-03
34	GO:0005665: DNA-directed RNA polymerase II, core complex	2.70E-03
35	GO:0019013: viral nucleocapsid	2.94E-03
36	GO:0000419: DNA-directed RNA polymerase V complex	3.71E-03
37	GO:0015935: small ribosomal subunit	4.54E-03
38	GO:0009506: plasmodesma	5.47E-03
39	GO:0030529: intracellular ribonucleoprotein complex	9.54E-03
40	GO:0005743: mitochondrial inner membrane	1.29E-02
41	GO:0009536: plastid	1.47E-02
42	GO:0005732: small nucleolar ribonucleoprotein complex	2.75E-02
43	GO:0005654: nucleoplasm	2.97E-02
44	GO:0005773: vacuole	2.97E-02
45	GO:0009543: chloroplast thylakoid lumen	3.03E-02