GO Enrichment Analysis of Co-expressed Genes with
AT2G27450
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0042821: pyridoxal biosynthetic process | 0.00E+00 |
| 2 | GO:0015882: L-ascorbic acid transport | 0.00E+00 |
| 3 | GO:0019265: glycine biosynthetic process, by transamination of glyoxylate | 0.00E+00 |
| 4 | GO:0042820: vitamin B6 catabolic process | 0.00E+00 |
| 5 | GO:0005997: xylulose metabolic process | 0.00E+00 |
| 6 | GO:0051484: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway involved in terpenoid biosynthetic process | 0.00E+00 |
| 7 | GO:1901918: negative regulation of exoribonuclease activity | 0.00E+00 |
| 8 | GO:0098586: cellular response to virus | 0.00E+00 |
| 9 | GO:0017009: protein-phycocyanobilin linkage | 0.00E+00 |
| 10 | GO:0009443: pyridoxal 5'-phosphate salvage | 1.42E-04 |
| 11 | GO:1904966: positive regulation of vitamin E biosynthetic process | 1.42E-04 |
| 12 | GO:1904964: positive regulation of phytol biosynthetic process | 1.42E-04 |
| 13 | GO:0006436: tryptophanyl-tRNA aminoacylation | 1.42E-04 |
| 14 | GO:1902458: positive regulation of stomatal opening | 1.42E-04 |
| 15 | GO:0010028: xanthophyll cycle | 1.42E-04 |
| 16 | GO:0006435: threonyl-tRNA aminoacylation | 3.25E-04 |
| 17 | GO:0080005: photosystem stoichiometry adjustment | 3.25E-04 |
| 18 | GO:0048314: embryo sac morphogenesis | 3.25E-04 |
| 19 | GO:0030187: melatonin biosynthetic process | 3.25E-04 |
| 20 | GO:0000256: allantoin catabolic process | 3.25E-04 |
| 21 | GO:1903426: regulation of reactive oxygen species biosynthetic process | 3.25E-04 |
| 22 | GO:0046741: transport of virus in host, tissue to tissue | 3.25E-04 |
| 23 | GO:1902326: positive regulation of chlorophyll biosynthetic process | 3.25E-04 |
| 24 | GO:0019853: L-ascorbic acid biosynthetic process | 4.15E-04 |
| 25 | GO:0009405: pathogenesis | 5.33E-04 |
| 26 | GO:0010136: ureide catabolic process | 5.33E-04 |
| 27 | GO:0005977: glycogen metabolic process | 5.33E-04 |
| 28 | GO:0042989: sequestering of actin monomers | 7.63E-04 |
| 29 | GO:0009052: pentose-phosphate shunt, non-oxidative branch | 7.63E-04 |
| 30 | GO:0046739: transport of virus in multicellular host | 7.63E-04 |
| 31 | GO:0043572: plastid fission | 7.63E-04 |
| 32 | GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly | 7.63E-04 |
| 33 | GO:0006145: purine nucleobase catabolic process | 7.63E-04 |
| 34 | GO:0055114: oxidation-reduction process | 9.22E-04 |
| 35 | GO:0015979: photosynthesis | 9.44E-04 |
| 36 | GO:0006021: inositol biosynthetic process | 1.01E-03 |
| 37 | GO:0010021: amylopectin biosynthetic process | 1.01E-03 |
| 38 | GO:0009765: photosynthesis, light harvesting | 1.01E-03 |
| 39 | GO:0016120: carotene biosynthetic process | 1.28E-03 |
| 40 | GO:0016558: protein import into peroxisome matrix | 1.28E-03 |
| 41 | GO:0030041: actin filament polymerization | 1.28E-03 |
| 42 | GO:0045038: protein import into chloroplast thylakoid membrane | 1.28E-03 |
| 43 | GO:0016123: xanthophyll biosynthetic process | 1.28E-03 |
| 44 | GO:0046855: inositol phosphate dephosphorylation | 1.57E-03 |
| 45 | GO:0042549: photosystem II stabilization | 1.57E-03 |
| 46 | GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway | 1.57E-03 |
| 47 | GO:0010189: vitamin E biosynthetic process | 1.88E-03 |
| 48 | GO:0051510: regulation of unidimensional cell growth | 2.21E-03 |
| 49 | GO:0048528: post-embryonic root development | 2.21E-03 |
| 50 | GO:1900056: negative regulation of leaf senescence | 2.21E-03 |
| 51 | GO:0018298: protein-chromophore linkage | 2.27E-03 |
| 52 | GO:0009642: response to light intensity | 2.56E-03 |
| 53 | GO:2000070: regulation of response to water deprivation | 2.56E-03 |
| 54 | GO:0048564: photosystem I assembly | 2.56E-03 |
| 55 | GO:0009853: photorespiration | 2.86E-03 |
| 56 | GO:0009657: plastid organization | 2.93E-03 |
| 57 | GO:0009793: embryo development ending in seed dormancy | 3.21E-03 |
| 58 | GO:0009658: chloroplast organization | 3.30E-03 |
| 59 | GO:0009821: alkaloid biosynthetic process | 3.31E-03 |
| 60 | GO:0006754: ATP biosynthetic process | 3.31E-03 |
| 61 | GO:0000373: Group II intron splicing | 3.31E-03 |
| 62 | GO:0098656: anion transmembrane transport | 3.31E-03 |
| 63 | GO:0010380: regulation of chlorophyll biosynthetic process | 3.71E-03 |
| 64 | GO:0006259: DNA metabolic process | 4.12E-03 |
| 65 | GO:0006265: DNA topological change | 4.55E-03 |
| 66 | GO:0006810: transport | 4.84E-03 |
| 67 | GO:0006364: rRNA processing | 4.95E-03 |
| 68 | GO:0006790: sulfur compound metabolic process | 4.99E-03 |
| 69 | GO:0009767: photosynthetic electron transport chain | 5.45E-03 |
| 70 | GO:0010020: chloroplast fission | 5.92E-03 |
| 71 | GO:0010207: photosystem II assembly | 5.92E-03 |
| 72 | GO:0090351: seedling development | 6.41E-03 |
| 73 | GO:0046854: phosphatidylinositol phosphorylation | 6.41E-03 |
| 74 | GO:0009553: embryo sac development | 6.83E-03 |
| 75 | GO:0006863: purine nucleobase transport | 6.91E-03 |
| 76 | GO:0006833: water transport | 6.91E-03 |
| 77 | GO:0009863: salicylic acid mediated signaling pathway | 7.42E-03 |
| 78 | GO:0007010: cytoskeleton organization | 7.42E-03 |
| 79 | GO:0007017: microtubule-based process | 7.95E-03 |
| 80 | GO:0051302: regulation of cell division | 7.95E-03 |
| 81 | GO:0008299: isoprenoid biosynthetic process | 7.95E-03 |
| 82 | GO:0006418: tRNA aminoacylation for protein translation | 7.95E-03 |
| 83 | GO:0051321: meiotic cell cycle | 8.49E-03 |
| 84 | GO:0006012: galactose metabolic process | 9.62E-03 |
| 85 | GO:0009306: protein secretion | 1.02E-02 |
| 86 | GO:0016117: carotenoid biosynthetic process | 1.08E-02 |
| 87 | GO:0034220: ion transmembrane transport | 1.14E-02 |
| 88 | GO:0006606: protein import into nucleus | 1.14E-02 |
| 89 | GO:0048868: pollen tube development | 1.20E-02 |
| 90 | GO:0007059: chromosome segregation | 1.26E-02 |
| 91 | GO:0019252: starch biosynthetic process | 1.33E-02 |
| 92 | GO:0008654: phospholipid biosynthetic process | 1.33E-02 |
| 93 | GO:0010193: response to ozone | 1.39E-02 |
| 94 | GO:0000302: response to reactive oxygen species | 1.39E-02 |
| 95 | GO:0006635: fatty acid beta-oxidation | 1.39E-02 |
| 96 | GO:0016032: viral process | 1.46E-02 |
| 97 | GO:0046686: response to cadmium ion | 1.88E-02 |
| 98 | GO:0042254: ribosome biogenesis | 1.93E-02 |
| 99 | GO:0042128: nitrate assimilation | 1.96E-02 |
| 100 | GO:0055085: transmembrane transport | 1.99E-02 |
| 101 | GO:0015995: chlorophyll biosynthetic process | 2.03E-02 |
| 102 | GO:0010411: xyloglucan metabolic process | 2.03E-02 |
| 103 | GO:0048481: plant ovule development | 2.19E-02 |
| 104 | GO:0009817: defense response to fungus, incompatible interaction | 2.19E-02 |
| 105 | GO:0006811: ion transport | 2.34E-02 |
| 106 | GO:0080167: response to karrikin | 2.35E-02 |
| 107 | GO:0048527: lateral root development | 2.42E-02 |
| 108 | GO:0007568: aging | 2.42E-02 |
| 109 | GO:0009910: negative regulation of flower development | 2.42E-02 |
| 110 | GO:0000724: double-strand break repair via homologous recombination | 2.51E-02 |
| 111 | GO:0006865: amino acid transport | 2.51E-02 |
| 112 | GO:0010114: response to red light | 3.10E-02 |
| 113 | GO:0042546: cell wall biogenesis | 3.19E-02 |
| 114 | GO:0009644: response to high light intensity | 3.28E-02 |
| 115 | GO:0031347: regulation of defense response | 3.55E-02 |
| 116 | GO:0010224: response to UV-B | 3.93E-02 |
| 117 | GO:0006417: regulation of translation | 4.12E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0071522: ureidoglycine aminohydrolase activity | 0.00E+00 |
| 2 | GO:0045435: lycopene epsilon cyclase activity | 0.00E+00 |
| 3 | GO:0004760: serine-pyruvate transaminase activity | 0.00E+00 |
| 4 | GO:0042623: ATPase activity, coupled | 0.00E+00 |
| 5 | GO:0030604: 1-deoxy-D-xylulose-5-phosphate reductoisomerase activity | 0.00E+00 |
| 6 | GO:0010276: phytol kinase activity | 0.00E+00 |
| 7 | GO:0015229: L-ascorbic acid transporter activity | 0.00E+00 |
| 8 | GO:0008942: nitrite reductase [NAD(P)H] activity | 0.00E+00 |
| 9 | GO:0050281: serine-glyoxylate transaminase activity | 0.00E+00 |
| 10 | GO:0004059: aralkylamine N-acetyltransferase activity | 0.00E+00 |
| 11 | GO:0010349: L-galactose dehydrogenase activity | 0.00E+00 |
| 12 | GO:0050236: pyridoxine:NADP 4-dehydrogenase activity | 0.00E+00 |
| 13 | GO:0070402: NADPH binding | 3.72E-06 |
| 14 | GO:0004033: aldo-keto reductase (NADP) activity | 9.72E-05 |
| 15 | GO:0047911: galacturan 1,4-alpha-galacturonidase activity | 1.42E-04 |
| 16 | GO:0004856: xylulokinase activity | 1.42E-04 |
| 17 | GO:0004830: tryptophan-tRNA ligase activity | 1.42E-04 |
| 18 | GO:0010347: L-galactose-1-phosphate phosphatase activity | 1.42E-04 |
| 19 | GO:0052833: inositol monophosphate 4-phosphatase activity | 3.25E-04 |
| 20 | GO:0004829: threonine-tRNA ligase activity | 3.25E-04 |
| 21 | GO:0019172: glyoxalase III activity | 3.25E-04 |
| 22 | GO:0019156: isoamylase activity | 3.25E-04 |
| 23 | GO:0009977: proton motive force dependent protein transmembrane transporter activity | 3.25E-04 |
| 24 | GO:0052832: inositol monophosphate 3-phosphatase activity | 3.25E-04 |
| 25 | GO:0008934: inositol monophosphate 1-phosphatase activity | 3.25E-04 |
| 26 | GO:0004148: dihydrolipoyl dehydrogenase activity | 5.33E-04 |
| 27 | GO:0004751: ribose-5-phosphate isomerase activity | 5.33E-04 |
| 28 | GO:0022891: substrate-specific transmembrane transporter activity | 7.35E-04 |
| 29 | GO:0016851: magnesium chelatase activity | 7.63E-04 |
| 30 | GO:0043495: protein anchor | 1.01E-03 |
| 31 | GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | 1.01E-03 |
| 32 | GO:0008453: alanine-glyoxylate transaminase activity | 1.01E-03 |
| 33 | GO:0016491: oxidoreductase activity | 1.05E-03 |
| 34 | GO:0048038: quinone binding | 1.22E-03 |
| 35 | GO:0016773: phosphotransferase activity, alcohol group as acceptor | 1.28E-03 |
| 36 | GO:0003785: actin monomer binding | 1.28E-03 |
| 37 | GO:0005275: amine transmembrane transporter activity | 1.28E-03 |
| 38 | GO:0000293: ferric-chelate reductase activity | 1.57E-03 |
| 39 | GO:0004556: alpha-amylase activity | 1.57E-03 |
| 40 | GO:0004462: lactoylglutathione lyase activity | 1.57E-03 |
| 41 | GO:0004605: phosphatidate cytidylyltransferase activity | 1.57E-03 |
| 42 | GO:0016168: chlorophyll binding | 1.84E-03 |
| 43 | GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity | 1.88E-03 |
| 44 | GO:0019899: enzyme binding | 2.21E-03 |
| 45 | GO:0003918: DNA topoisomerase type II (ATP-hydrolyzing) activity | 2.93E-03 |
| 46 | GO:0008553: hydrogen-exporting ATPase activity, phosphorylative mechanism | 3.31E-03 |
| 47 | GO:0045309: protein phosphorylated amino acid binding | 3.71E-03 |
| 48 | GO:0016844: strictosidine synthase activity | 3.71E-03 |
| 49 | GO:0019904: protein domain specific binding | 4.55E-03 |
| 50 | GO:0008081: phosphoric diester hydrolase activity | 5.45E-03 |
| 51 | GO:0005315: inorganic phosphate transmembrane transporter activity | 5.45E-03 |
| 52 | GO:0005528: FK506 binding | 7.42E-03 |
| 53 | GO:0005345: purine nucleobase transmembrane transporter activity | 7.95E-03 |
| 54 | GO:0003727: single-stranded RNA binding | 1.02E-02 |
| 55 | GO:0008514: organic anion transmembrane transporter activity | 1.02E-02 |
| 56 | GO:0004812: aminoacyl-tRNA ligase activity | 1.08E-02 |
| 57 | GO:0008080: N-acetyltransferase activity | 1.20E-02 |
| 58 | GO:0016887: ATPase activity | 1.24E-02 |
| 59 | GO:0016853: isomerase activity | 1.26E-02 |
| 60 | GO:0016762: xyloglucan:xyloglucosyl transferase activity | 1.39E-02 |
| 61 | GO:0008483: transaminase activity | 1.67E-02 |
| 62 | GO:0015250: water channel activity | 1.81E-02 |
| 63 | GO:0016798: hydrolase activity, acting on glycosyl bonds | 2.03E-02 |
| 64 | GO:0005507: copper ion binding | 2.30E-02 |
| 65 | GO:0050897: cobalt ion binding | 2.42E-02 |
| 66 | GO:0030145: manganese ion binding | 2.42E-02 |
| 67 | GO:0004364: glutathione transferase activity | 3.01E-02 |
| 68 | GO:0051537: 2 iron, 2 sulfur cluster binding | 3.28E-02 |
| 69 | GO:0043621: protein self-association | 3.28E-02 |
| 70 | GO:0003924: GTPase activity | 3.46E-02 |
| 71 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 3.46E-02 |
| 72 | GO:0005506: iron ion binding | 3.50E-02 |
| 73 | GO:0009055: electron carrier activity | 3.71E-02 |
| 74 | GO:0031625: ubiquitin protein ligase binding | 4.12E-02 |
| 75 | GO:0003777: microtubule motor activity | 4.12E-02 |
| 76 | GO:0004650: polygalacturonase activity | 4.62E-02 |
| 77 | GO:0003779: actin binding | 4.82E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009507: chloroplast | 5.29E-30 |
| 2 | GO:0009535: chloroplast thylakoid membrane | 3.22E-14 |
| 3 | GO:0009941: chloroplast envelope | 5.01E-06 |
| 4 | GO:0009534: chloroplast thylakoid | 3.08E-05 |
| 5 | GO:0009523: photosystem II | 7.99E-05 |
| 6 | GO:0009570: chloroplast stroma | 1.03E-04 |
| 7 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 1.50E-04 |
| 8 | GO:0009543: chloroplast thylakoid lumen | 1.64E-04 |
| 9 | GO:0033281: TAT protein transport complex | 5.33E-04 |
| 10 | GO:0010007: magnesium chelatase complex | 5.33E-04 |
| 11 | GO:0030286: dynein complex | 1.01E-03 |
| 12 | GO:0009330: DNA topoisomerase complex (ATP-hydrolyzing) | 1.01E-03 |
| 13 | GO:0009295: nucleoid | 1.56E-03 |
| 14 | GO:0005778: peroxisomal membrane | 1.56E-03 |
| 15 | GO:0009707: chloroplast outer membrane | 2.27E-03 |
| 16 | GO:0042644: chloroplast nucleoid | 3.31E-03 |
| 17 | GO:0031977: thylakoid lumen | 3.40E-03 |
| 18 | GO:0031969: chloroplast membrane | 4.34E-03 |
| 19 | GO:0005938: cell cortex | 5.45E-03 |
| 20 | GO:0009508: plastid chromosome | 5.45E-03 |
| 21 | GO:0030095: chloroplast photosystem II | 5.92E-03 |
| 22 | GO:0005747: mitochondrial respiratory chain complex I | 6.04E-03 |
| 23 | GO:0005875: microtubule associated complex | 6.91E-03 |
| 24 | GO:0042651: thylakoid membrane | 7.95E-03 |
| 25 | GO:0045271: respiratory chain complex I | 7.95E-03 |
| 26 | GO:0009654: photosystem II oxygen evolving complex | 7.95E-03 |
| 27 | GO:0015629: actin cytoskeleton | 9.62E-03 |
| 28 | GO:0019898: extrinsic component of membrane | 1.33E-02 |
| 29 | GO:0009579: thylakoid | 1.85E-02 |
| 30 | GO:0031966: mitochondrial membrane | 3.65E-02 |
| 31 | GO:0009536: plastid | 4.58E-02 |
| 32 | GO:0009706: chloroplast inner membrane | 4.92E-02 |