Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT2G27360

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0046292: formaldehyde metabolic process0.00E+00
2GO:0023052: signaling0.00E+00
3GO:0015746: citrate transport0.00E+00
4GO:0006721: terpenoid metabolic process0.00E+00
5GO:0006069: ethanol oxidation0.00E+00
6GO:0042908: xenobiotic transport0.00E+00
7GO:0018293: protein-FAD linkage0.00E+00
8GO:0034553: mitochondrial respiratory chain complex II assembly0.00E+00
9GO:0006006: glucose metabolic process3.36E-06
10GO:0016487: farnesol metabolic process8.96E-05
11GO:0031539: positive regulation of anthocyanin metabolic process8.96E-05
12GO:0031468: nuclear envelope reassembly8.96E-05
13GO:1902418: (+)-abscisic acid D-glucopyranosyl ester transmembrane transport8.96E-05
14GO:0010265: SCF complex assembly8.96E-05
15GO:0015798: myo-inositol transport8.96E-05
16GO:0006099: tricarboxylic acid cycle1.38E-04
17GO:0080026: response to indolebutyric acid2.12E-04
18GO:0016560: protein import into peroxisome matrix, docking2.12E-04
19GO:0019388: galactose catabolic process2.12E-04
20GO:0006432: phenylalanyl-tRNA aminoacylation2.12E-04
21GO:0015940: pantothenate biosynthetic process3.54E-04
22GO:0045793: positive regulation of cell size3.54E-04
23GO:0006760: folic acid-containing compound metabolic process3.54E-04
24GO:0006107: oxaloacetate metabolic process5.10E-04
25GO:0006241: CTP biosynthetic process5.10E-04
26GO:0006165: nucleoside diphosphate phosphorylation5.10E-04
27GO:0006228: UTP biosynthetic process5.10E-04
28GO:0009963: positive regulation of flavonoid biosynthetic process5.10E-04
29GO:0015700: arsenite transport5.10E-04
30GO:0009590: detection of gravity5.10E-04
31GO:0080024: indolebutyric acid metabolic process5.10E-04
32GO:0032877: positive regulation of DNA endoreduplication5.10E-04
33GO:0080022: primary root development5.13E-04
34GO:0016042: lipid catabolic process5.19E-04
35GO:0006183: GTP biosynthetic process6.78E-04
36GO:0006221: pyrimidine nucleotide biosynthetic process6.78E-04
37GO:0006625: protein targeting to peroxisome6.78E-04
38GO:0032366: intracellular sterol transport6.78E-04
39GO:0044205: 'de novo' UMP biosynthetic process6.78E-04
40GO:0051781: positive regulation of cell division6.78E-04
41GO:0070814: hydrogen sulfide biosynthetic process1.05E-03
42GO:0003006: developmental process involved in reproduction1.05E-03
43GO:0009117: nucleotide metabolic process1.05E-03
44GO:0006121: mitochondrial electron transport, succinate to ubiquinone1.05E-03
45GO:0006207: 'de novo' pyrimidine nucleobase biosynthetic process1.46E-03
46GO:0006122: mitochondrial electron transport, ubiquinol to cytochrome c1.46E-03
47GO:0010044: response to aluminum ion1.46E-03
48GO:0009853: photorespiration1.56E-03
49GO:0008610: lipid biosynthetic process1.69E-03
50GO:0005978: glycogen biosynthetic process1.69E-03
51GO:0009787: regulation of abscisic acid-activated signaling pathway1.69E-03
52GO:0048658: anther wall tapetum development1.69E-03
53GO:0006631: fatty acid metabolic process1.84E-03
54GO:2000031: regulation of salicylic acid mediated signaling pathway1.93E-03
55GO:0010099: regulation of photomorphogenesis1.93E-03
56GO:0046685: response to arsenic-containing substance2.18E-03
57GO:0009821: alkaloid biosynthetic process2.18E-03
58GO:0080144: amino acid homeostasis2.18E-03
59GO:0006855: drug transmembrane transport2.32E-03
60GO:0009970: cellular response to sulfate starvation2.70E-03
61GO:0006535: cysteine biosynthetic process from serine2.70E-03
62GO:0000103: sulfate assimilation2.70E-03
63GO:0052544: defense response by callose deposition in cell wall2.98E-03
64GO:0072593: reactive oxygen species metabolic process2.98E-03
65GO:0048229: gametophyte development2.98E-03
66GO:0006378: mRNA polyadenylation2.98E-03
67GO:0048316: seed development3.25E-03
68GO:0002213: defense response to insect3.26E-03
69GO:0009620: response to fungus3.46E-03
70GO:0006807: nitrogen compound metabolic process3.56E-03
71GO:0006108: malate metabolic process3.56E-03
72GO:0050826: response to freezing3.56E-03
73GO:0007031: peroxisome organization4.18E-03
74GO:0007030: Golgi organization4.18E-03
75GO:0019853: L-ascorbic acid biosynthetic process4.18E-03
76GO:0010039: response to iron ion4.18E-03
77GO:0042753: positive regulation of circadian rhythm4.50E-03
78GO:0006636: unsaturated fatty acid biosynthetic process4.50E-03
79GO:0006071: glycerol metabolic process4.50E-03
80GO:0019344: cysteine biosynthetic process4.83E-03
81GO:0009058: biosynthetic process4.99E-03
82GO:0009695: jasmonic acid biosynthetic process5.17E-03
83GO:0010017: red or far-red light signaling pathway5.87E-03
84GO:0035428: hexose transmembrane transport5.87E-03
85GO:2000022: regulation of jasmonic acid mediated signaling pathway5.87E-03
86GO:0080092: regulation of pollen tube growth5.87E-03
87GO:0010228: vegetative to reproductive phase transition of meristem6.83E-03
88GO:0005975: carbohydrate metabolic process7.03E-03
89GO:0042631: cellular response to water deprivation7.37E-03
90GO:0042391: regulation of membrane potential7.37E-03
91GO:0034220: ion transmembrane transport7.37E-03
92GO:0010051: xylem and phloem pattern formation7.37E-03
93GO:0009958: positive gravitropism7.77E-03
94GO:0048868: pollen tube development7.77E-03
95GO:0046323: glucose import7.77E-03
96GO:0015986: ATP synthesis coupled proton transport8.17E-03
97GO:0061025: membrane fusion8.17E-03
98GO:0019252: starch biosynthetic process8.58E-03
99GO:0055072: iron ion homeostasis8.58E-03
100GO:0016132: brassinosteroid biosynthetic process8.99E-03
101GO:0009826: unidimensional cell growth9.73E-03
102GO:1901657: glycosyl compound metabolic process9.85E-03
103GO:0009567: double fertilization forming a zygote and endosperm1.03E-02
104GO:0010286: heat acclimation1.07E-02
105GO:0055114: oxidation-reduction process1.08E-02
106GO:0051607: defense response to virus1.12E-02
107GO:0000910: cytokinesis1.12E-02
108GO:0016126: sterol biosynthetic process1.17E-02
109GO:0009615: response to virus1.17E-02
110GO:0009788: negative regulation of abscisic acid-activated signaling pathway1.21E-02
111GO:0006974: cellular response to DNA damage stimulus1.26E-02
112GO:0008219: cell death1.41E-02
113GO:0048767: root hair elongation1.46E-02
114GO:0045454: cell redox homeostasis1.50E-02
115GO:0006811: ion transport1.51E-02
116GO:0010218: response to far red light1.51E-02
117GO:0045087: innate immune response1.66E-02
118GO:0009751: response to salicylic acid1.83E-02
119GO:0006629: lipid metabolic process1.86E-02
120GO:0009408: response to heat1.86E-02
121GO:0042542: response to hydrogen peroxide1.93E-02
122GO:0009640: photomorphogenesis1.99E-02
123GO:0010114: response to red light1.99E-02
124GO:0009926: auxin polar transport1.99E-02
125GO:0009753: response to jasmonic acid1.99E-02
126GO:0008152: metabolic process2.05E-02
127GO:0009585: red, far-red light phototransduction2.46E-02
128GO:0010224: response to UV-B2.52E-02
129GO:0006857: oligopeptide transport2.58E-02
130GO:0006810: transport2.65E-02
131GO:0006096: glycolytic process2.77E-02
132GO:0009735: response to cytokinin3.01E-02
133GO:0009740: gibberellic acid mediated signaling pathway3.03E-02
134GO:0051726: regulation of cell cycle3.30E-02
135GO:0055085: transmembrane transport4.17E-02
136GO:0006633: fatty acid biosynthetic process4.36E-02
137GO:0010150: leaf senescence4.67E-02
138GO:0006952: defense response4.80E-02
RankGO TermAdjusted P value
1GO:0010474: glucose-1-phosphate guanylyltransferase (GDP) activity0.00E+00
2GO:0010473: GDP-galactose:myoinositol-1-phosphate guanylyltransferase activity0.00E+00
3GO:0050152: omega-amidase activity0.00E+00
4GO:0051903: S-(hydroxymethyl)glutathione dehydrogenase activity0.00E+00
5GO:0004151: dihydroorotase activity0.00E+00
6GO:0102996: beta,beta digalactosyldiacylglycerol galactosyltransferase activity0.00E+00
7GO:0010471: GDP-galactose:mannose-1-phosphate guanylyltransferase activity0.00E+00
8GO:0015391: nucleobase:cation symporter activity0.00E+00
9GO:0010472: GDP-galactose:glucose-1-phosphate guanylyltransferase activity0.00E+00
10GO:0047886: farnesol dehydrogenase activity0.00E+00
11GO:0008928: mannose-1-phosphate guanylyltransferase (GDP) activity0.00E+00
12GO:0004768: stearoyl-CoA 9-desaturase activity0.00E+00
13GO:0080007: S-nitrosoglutathione reductase activity0.00E+00
14GO:0016788: hydrolase activity, acting on ester bonds1.85E-05
15GO:0015137: citrate transmembrane transporter activity8.96E-05
16GO:0080079: cellobiose glucosidase activity8.96E-05
17GO:0003864: 3-methyl-2-oxobutanoate hydroxymethyltransferase activity8.96E-05
18GO:0015446: ATPase-coupled arsenite transmembrane transporter activity8.96E-05
19GO:0010475: galactose-1-phosphate guanylyltransferase (GDP) activity8.96E-05
20GO:0080047: GDP-L-galactose phosphorylase activity8.96E-05
21GO:0071992: phytochelatin transmembrane transporter activity8.96E-05
22GO:1902417: (+)-abscisic acid D-glucopyranosyl ester transmembrane transporter activity8.96E-05
23GO:0000248: C-5 sterol desaturase activity8.96E-05
24GO:0080048: GDP-D-glucose phosphorylase activity8.96E-05
25GO:0046480: galactolipid galactosyltransferase activity8.96E-05
26GO:0050897: cobalt ion binding1.13E-04
27GO:0004089: carbonate dehydratase activity1.73E-04
28GO:0004826: phenylalanine-tRNA ligase activity2.12E-04
29GO:0004614: phosphoglucomutase activity2.12E-04
30GO:0051980: iron-nicotianamine transmembrane transporter activity2.12E-04
31GO:0005366: myo-inositol:proton symporter activity2.12E-04
32GO:0052689: carboxylic ester hydrolase activity3.46E-04
33GO:0004557: alpha-galactosidase activity3.54E-04
34GO:0004781: sulfate adenylyltransferase (ATP) activity3.54E-04
35GO:0052692: raffinose alpha-galactosidase activity3.54E-04
36GO:0035529: NADH pyrophosphatase activity5.10E-04
37GO:0004550: nucleoside diphosphate kinase activity5.10E-04
38GO:0004365: glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity5.10E-04
39GO:0016810: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds6.78E-04
40GO:0016616: oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor6.78E-04
41GO:0010011: auxin binding6.78E-04
42GO:0008177: succinate dehydrogenase (ubiquinone) activity8.59E-04
43GO:0045300: acyl-[acyl-carrier-protein] desaturase activity8.59E-04
44GO:0051117: ATPase binding1.05E-03
45GO:0004069: L-aspartate:2-oxoglutarate aminotransferase activity1.05E-03
46GO:0080130: L-phenylalanine:2-oxoglutarate aminotransferase activity1.05E-03
47GO:0080046: quercetin 4'-O-glucosyltransferase activity1.05E-03
48GO:0005261: cation channel activity1.25E-03
49GO:0004602: glutathione peroxidase activity1.25E-03
50GO:0004124: cysteine synthase activity1.25E-03
51GO:0008121: ubiquinol-cytochrome-c reductase activity1.46E-03
52GO:0005085: guanyl-nucleotide exchange factor activity1.46E-03
53GO:0004869: cysteine-type endopeptidase inhibitor activity1.69E-03
54GO:0008889: glycerophosphodiester phosphodiesterase activity2.18E-03
55GO:0016844: strictosidine synthase activity2.43E-03
56GO:0016298: lipase activity2.77E-03
57GO:0004129: cytochrome-c oxidase activity2.98E-03
58GO:0008794: arsenate reductase (glutaredoxin) activity2.98E-03
59GO:0005089: Rho guanyl-nucleotide exchange factor activity2.98E-03
60GO:0008559: xenobiotic-transporting ATPase activity2.98E-03
61GO:0008378: galactosyltransferase activity3.26E-03
62GO:0000049: tRNA binding3.26E-03
63GO:0015198: oligopeptide transporter activity3.26E-03
64GO:0004022: alcohol dehydrogenase (NAD) activity3.56E-03
65GO:0022857: transmembrane transporter activity3.57E-03
66GO:0015035: protein disulfide oxidoreductase activity3.90E-03
67GO:0030553: cGMP binding4.18E-03
68GO:0030552: cAMP binding4.18E-03
69GO:0043130: ubiquitin binding4.83E-03
70GO:0005216: ion channel activity5.17E-03
71GO:0030170: pyridoxal phosphate binding5.25E-03
72GO:0005102: receptor binding6.99E-03
73GO:0030551: cyclic nucleotide binding7.37E-03
74GO:0005249: voltage-gated potassium channel activity7.37E-03
75GO:0046933: proton-transporting ATP synthase activity, rotational mechanism7.77E-03
76GO:0030276: clathrin binding7.77E-03
77GO:0005355: glucose transmembrane transporter activity8.17E-03
78GO:0050662: coenzyme binding8.17E-03
79GO:0004872: receptor activity8.58E-03
80GO:0016597: amino acid binding1.12E-02
81GO:0015250: water channel activity1.17E-02
82GO:0016787: hydrolase activity1.18E-02
83GO:0030247: polysaccharide binding1.31E-02
84GO:0008236: serine-type peptidase activity1.36E-02
85GO:0015238: drug transmembrane transporter activity1.46E-02
86GO:0008422: beta-glucosidase activity1.77E-02
87GO:0050661: NADP binding1.82E-02
88GO:0009055: electron carrier activity1.99E-02
89GO:0004185: serine-type carboxypeptidase activity1.99E-02
90GO:0051537: 2 iron, 2 sulfur cluster binding2.10E-02
91GO:0051287: NAD binding2.28E-02
92GO:0016491: oxidoreductase activity2.31E-02
93GO:0003690: double-stranded DNA binding2.52E-02
94GO:0008234: cysteine-type peptidase activity2.65E-02
95GO:0019843: rRNA binding3.71E-02
96GO:0008270: zinc ion binding3.91E-02
97GO:0016740: transferase activity4.01E-02
98GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding4.07E-02
99GO:0015144: carbohydrate transmembrane transporter activity4.22E-02
100GO:0008565: protein transporter activity4.22E-02
101GO:0015297: antiporter activity4.51E-02
102GO:0005351: sugar:proton symporter activity4.59E-02
103GO:0005507: copper ion binding4.67E-02
104GO:0005516: calmodulin binding4.93E-02
RankGO TermAdjusted P value
1GO:0005773: vacuole1.87E-05
2GO:0005749: mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone)4.79E-05
3GO:0045273: respiratory chain complex II4.79E-05
4GO:1990429: peroxisomal importomer complex8.96E-05
5GO:0009536: plastid2.52E-04
6GO:0045271: respiratory chain complex I3.07E-04
7GO:0005849: mRNA cleavage factor complex5.10E-04
8GO:0000275: mitochondrial proton-transporting ATP synthase complex, catalytic core F(1)6.78E-04
9GO:0005783: endoplasmic reticulum8.07E-04
10GO:0005746: mitochondrial respiratory chain8.59E-04
11GO:0009507: chloroplast1.12E-03
12GO:0031359: integral component of chloroplast outer membrane1.46E-03
13GO:0009570: chloroplast stroma2.26E-03
14GO:0031966: mitochondrial membrane2.49E-03
15GO:0005747: mitochondrial respiratory chain complex I3.25E-03
16GO:0005750: mitochondrial respiratory chain complex III3.86E-03
17GO:0005764: lysosome3.86E-03
18GO:0005753: mitochondrial proton-transporting ATP synthase complex4.18E-03
19GO:0005758: mitochondrial intermembrane space4.83E-03
20GO:0005886: plasma membrane6.95E-03
21GO:0030136: clathrin-coated vesicle6.99E-03
22GO:0005777: peroxisome7.94E-03
23GO:0005618: cell wall9.10E-03
24GO:0005778: peroxisomal membrane1.07E-02
25GO:0010319: stromule1.07E-02
26GO:0005829: cytosol1.12E-02
27GO:0005788: endoplasmic reticulum lumen1.21E-02
28GO:0005739: mitochondrion1.27E-02
29GO:0009707: chloroplast outer membrane1.41E-02
30GO:0000325: plant-type vacuole1.56E-02
31GO:0090406: pollen tube1.99E-02
32GO:0005774: vacuolar membrane2.43E-02
33GO:0005887: integral component of plasma membrane2.52E-02
34GO:0012505: endomembrane system3.10E-02
35GO:0009543: chloroplast thylakoid lumen3.71E-02
36GO:0016020: membrane4.05E-02
37GO:0005759: mitochondrial matrix4.36E-02
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Gene type



Gene DE type